RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PNPLA6Q8IY17 1366 aa17.5■□□□□ 0.39
PCDHA3-202ENST00000532566 CD2BP2O95400 341 aaKnown RBP17.49■□□□□ 0.39
PCDHA3-202ENST00000532566 TDRD12Q587J7 1177 aaKnown RBP17.49■□□□□ 0.39
PCDHA3-202ENST00000532566 ARMT1Q9H993 441 aa17.49■□□□□ 0.39
PCDHA3-202ENST00000532566 ANTXR1Q9H6X2 564 aa17.49■□□□□ 0.39
PCDHA3-202ENST00000532566 E7EWF7 191 aa17.49■□□□□ 0.39
PCDHA3-202ENST00000532566 SKIDA1Q1XH10 827 aa17.49■□□□□ 0.39
PCDHA3-202ENST00000532566 JAKMIP3Q5VZ66 844 aa17.49■□□□□ 0.39
PCDHA3-202ENST00000532566 ANO1Q5XXA6 986 aa17.49■□□□□ 0.39
PCDHA3-202ENST00000532566 CCDC87Q9NVE4 849 aa17.49■□□□□ 0.39
PCDHA3-202ENST00000532566 ELP1O95163 1332 aa17.49■□□□□ 0.39
PCDHA3-202ENST00000532566 CBX1P83916 185 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 RILPL1Q5EBL4 403 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 GTF3C6Q969F1 213 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 HAUS7Q99871 368 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 LRRC27Q9C0I9 530 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 EXOC1Q9NV70 894 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 MED14O60244 1454 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 TMEM94Q12767 1356 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 VPS36Q86VN1 386 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 LSG1Q9H089 658 aaKnown RBP17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 CABP5Q9NP86 173 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 ERBB3P21860 1342 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 LDHBP07195 334 aaKnown RBP17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 PLCG2P16885 1265 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 NAPAP54920 295 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 CCDC40Q4G0X9 1142 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 TMX1Q9H3N1 280 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 RRAGDQ9NQL2 400 aaPredicted RBP17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 CEP152O94986 1710 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 IFNKQ9P0W0 207 aa17.48■□□□□ 0.39
PCDHA3-202ENST00000532566 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
PCDHA3-202ENST00000532566 ZNF622Q969S3 477 aaKnown RBP eCLIP17.47■□□□□ 0.39
PCDHA3-202ENST00000532566 OTUD7BQ6GQQ9 843 aa17.47■□□□□ 0.39
PCDHA3-202ENST00000532566 RASEFQ8IZ41 740 aa17.47■□□□□ 0.39
PCDHA3-202ENST00000532566 CRACR2AQ9BSW2 395 aa17.47■□□□□ 0.39
PCDHA3-202ENST00000532566 RBM28Q9NW13 759 aaKnown RBP17.47■□□□□ 0.39
PCDHA3-202ENST00000532566 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
PCDHA3-202ENST00000532566 PSMA7O14818 248 aa17.47■□□□□ 0.39
PCDHA3-202ENST00000532566 DEXIO95424 95 aa17.47■□□□□ 0.39
PCDHA3-202ENST00000532566 TAF5LO75529 589 aa17.47■□□□□ 0.39
PCDHA3-202ENST00000532566 SEC62Q99442 399 aaKnown RBP17.47■□□□□ 0.39
PCDHA3-202ENST00000532566 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.47■□□□□ 0.39
PCDHA3-202ENST00000532566 ZNF532Q9HCE3 1301 aa17.46■□□□□ 0.39
PCDHA3-202ENST00000532566 GNPATO15228 680 aa17.46■□□□□ 0.39
PCDHA3-202ENST00000532566 FAM193AP78312 1265 aa17.46■□□□□ 0.39
PCDHA3-202ENST00000532566 MAP9Q49MG5 647 aa17.46■□□□□ 0.39
PCDHA3-202ENST00000532566 MAP4K1Q92918 833 aa17.46■□□□□ 0.39
PCDHA3-202ENST00000532566 TPCN1Q9ULQ1 816 aa17.46■□□□□ 0.39
PCDHA3-202ENST00000532566 MTMR6Q9Y217 621 aa17.46■□□□□ 0.39
PCDHA3-202ENST00000532566 ANKARQ7Z5J8 1434 aa17.46■□□□□ 0.39
PCDHA3-202ENST00000532566 MYL5Q02045 173 aa17.46■□□□□ 0.39
PCDHA3-202ENST00000532566 PPP4R3BQ5MIZ7 849 aa17.46■□□□□ 0.39
PCDHA3-202ENST00000532566 C6orf50Q9HD87 102 aa17.46■□□□□ 0.39
PCDHA3-202ENST00000532566 F8W031 263 aaPredicted RBP17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 PAFAH1B1P43034 410 aa17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 DNAI1Q9UI46 699 aa17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 TRIM21P19474 475 aaKnown RBP17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 ENOX2Q16206 610 aaKnown RBP17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 EHMT1Q9H9B1 1298 aa17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 DBNLQ9UJU6 430 aaKnown RBP17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 SPATA5Q8NB90 893 aa17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 FBXO3Q9UK99 471 aa17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 H0YHG0 523 aa17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 PCCAP05165 728 aaPredicted RBP17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 IQUBQ8NA54 791 aa17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 ZC3H12CQ9C0D7 883 aaKnown RBP17.45■□□□□ 0.38
PCDHA3-202ENST00000532566 PRAMEF22A3QJZ6 481 aa17.44■□□□□ 0.38
PCDHA3-202ENST00000532566 TUBB4AP04350 444 aa17.44■□□□□ 0.38
PCDHA3-202ENST00000532566 MCM3P25205 808 aa17.44■□□□□ 0.38
PCDHA3-202ENST00000532566 HIBADHP31937 336 aaKnown RBP17.44■□□□□ 0.38
PCDHA3-202ENST00000532566 CTSWP56202 376 aa17.44■□□□□ 0.38
PCDHA3-202ENST00000532566 DIS3L2Q8IYB7 885 aaKnown RBP17.44■□□□□ 0.38
PCDHA3-202ENST00000532566 JAG2Q9Y219 1238 aa17.44■□□□□ 0.38
PCDHA3-202ENST00000532566 TULP4Q9NRJ4 1543 aa17.44■□□□□ 0.38
PCDHA3-202ENST00000532566 LMTK3Q96Q04 1460 aa17.44■□□□□ 0.38
PCDHA3-202ENST00000532566 PICALMQ13492 652 aa17.44■□□□□ 0.38
PCDHA3-202ENST00000532566 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.44■□□□□ 0.38
PCDHA3-202ENST00000532566 ZBTB38Q8NAP3 1195 aaPredicted RBP17.44■□□□□ 0.38
PCDHA3-202ENST00000532566 LRRC24Q50LG9 513 aa17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 ZNF274Q96GC6 653 aaPredicted RBP17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 HSPD1P10809 573 aaKnown RBP17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 ASIC1P78348 528 aa17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 CBX8Q9HC52 389 aa17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 TCERG1LQ5VWI1 586 aa17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 PPRC1Q5VV67 1664 aaKnown RBP17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 MCM7P33993 719 aa17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 CUL4AQ13619 759 aa17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 ADCK5Q3MIX3 580 aa17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 FEZ1Q99689 392 aa17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 CENPHQ9H3R5 247 aa17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 LRRC7Q96NW7 1537 aa17.43■□□□□ 0.38
PCDHA3-202ENST00000532566 POTEB2H3BUK9 544 aa17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 GNA11P29992 359 aa17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 KRT40Q6A162 431 aa17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 TLR7Q9NYK1 1049 aaKnown RBP17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 STX17P56962 302 aa17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 POLA2Q14181 598 aa17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 RRP36Q96EU6 259 aaKnown RBP17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 KCNH3Q9ULD8 1083 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms