RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ZBTB48P10074 688 aaPredicted RBP21.05■□□□□ 0.96
CPSF1-207ENST00000531727 BCAMP50895 628 aa21.05■□□□□ 0.96
CPSF1-207ENST00000531727 HDLBPQ00341 1268 aaKnown RBP21.05■□□□□ 0.96
CPSF1-207ENST00000531727 NOM1Q5C9Z4 860 aaKnown RBP21.05■□□□□ 0.96
CPSF1-207ENST00000531727 ZNF296Q8WUU4 475 aaPredicted RBP21.05■□□□□ 0.96
CPSF1-207ENST00000531727 CLMNQ96JQ2 1002 aa21.05■□□□□ 0.96
CPSF1-207ENST00000531727 CFHR5Q9BXR6 569 aa21.05■□□□□ 0.96
CPSF1-207ENST00000531727 MANSC4A6NHS7 340 aaPredicted RBP21.04■□□□□ 0.96
CPSF1-207ENST00000531727 USP2O75604 605 aaPredicted RBP21.04■□□□□ 0.96
CPSF1-207ENST00000531727 IREB2P48200 963 aaKnown RBP21.04■□□□□ 0.96
CPSF1-207ENST00000531727 WNK4Q96J92 1243 aa21.04■□□□□ 0.96
CPSF1-207ENST00000531727 API5Q9BZZ5 524 aaKnown RBP21.04■□□□□ 0.96
CPSF1-207ENST00000531727 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.04■□□□□ 0.96
CPSF1-207ENST00000531727 OTOFQ9HC10 1997 aa21.04■□□□□ 0.96
CPSF1-207ENST00000531727 MYH13Q9UKX3 1938 aa21.04■□□□□ 0.96
CPSF1-207ENST00000531727 GPR25O00155 361 aa21.03■□□□□ 0.96
CPSF1-207ENST00000531727 INHBEP58166 350 aa21.03■□□□□ 0.96
CPSF1-207ENST00000531727 TCP10L2B9ZVM9 353 aa21.02■□□□□ 0.96
CPSF1-207ENST00000531727 ALDH1A1P00352 501 aa21.02■□□□□ 0.96
CPSF1-207ENST00000531727 SLC5A1P13866 664 aa21.02■□□□□ 0.96
CPSF1-207ENST00000531727 TNNI2P48788 182 aa21.02■□□□□ 0.96
CPSF1-207ENST00000531727 MLLT1Q03111 559 aaPredicted RBP21.02■□□□□ 0.96
CPSF1-207ENST00000531727 ATG9AQ7Z3C6 839 aa21.02■□□□□ 0.96
CPSF1-207ENST00000531727 ANKRD13AQ8IZ07 590 aa21.02■□□□□ 0.96
CPSF1-207ENST00000531727 LPIN2Q92539 896 aa21.02■□□□□ 0.96
CPSF1-207ENST00000531727 TEKT1Q969V4 418 aa21.02■□□□□ 0.96
CPSF1-207ENST00000531727 TEPSINQ96N21 525 aa21.02■□□□□ 0.96
CPSF1-207ENST00000531727 FBXO3Q9UK99 471 aa21.02■□□□□ 0.96
CPSF1-207ENST00000531727 SUGT1Q9Y2Z0 365 aa21.02■□□□□ 0.96
CPSF1-207ENST00000531727 RARSP54136 660 aaKnown RBP21.01■□□□□ 0.95
CPSF1-207ENST00000531727 MRIQ9BWK5 157 aa21.01■□□□□ 0.95
CPSF1-207ENST00000531727 HDAC5Q9UQL6 1122 aa21.01■□□□□ 0.95
CPSF1-207ENST00000531727 MAST3O60307 1309 aa21.01■□□□□ 0.95
CPSF1-207ENST00000531727 CIAO1O76071 339 aa21■□□□□ 0.95
CPSF1-207ENST00000531727 PKN2Q16513 984 aaKnown RBP21■□□□□ 0.95
CPSF1-207ENST00000531727 IFNL1Q8IU54 200 aa21■□□□□ 0.95
CPSF1-207ENST00000531727 CDAN1Q8IWY9 1227 aa21■□□□□ 0.95
CPSF1-207ENST00000531727 ZDHHC15Q96MV8 337 aa21■□□□□ 0.95
CPSF1-207ENST00000531727 TMEM39BQ9GZU3 492 aa21■□□□□ 0.95
CPSF1-207ENST00000531727 LRRFIP2Q9Y608 721 aaKnown RBP21■□□□□ 0.95
CPSF1-207ENST00000531727 GJA5P36382 358 aa20.99■□□□□ 0.95
CPSF1-207ENST00000531727 SIL1Q9H173 461 aa20.99■□□□□ 0.95
CPSF1-207ENST00000531727 R3HDMLQ9H3Y0 253 aa20.99■□□□□ 0.95
CPSF1-207ENST00000531727 FKTNO75072 461 aa20.98■□□□□ 0.95
CPSF1-207ENST00000531727 ATP2B3Q16720 1220 aa20.98■□□□□ 0.95
CPSF1-207ENST00000531727 WDR66Q8TBY9 1149 aa20.98■□□□□ 0.95
CPSF1-207ENST00000531727 ARHGAP45Q92619 1136 aa20.98■□□□□ 0.95
CPSF1-207ENST00000531727 MEIS3Q99687 375 aa20.98■□□□□ 0.95
CPSF1-207ENST00000531727 CEP126Q9P2H0 1117 aa20.98■□□□□ 0.95
CPSF1-207ENST00000531727 IGF2BP3O00425 579 aaKnown RBP eCLIP20.97■□□□□ 0.95
CPSF1-207ENST00000531727 CACNB3P54284 484 aa20.97■□□□□ 0.95
CPSF1-207ENST00000531727 APOBEC3HQ6NTF7 200 aaKnown RBP20.97■□□□□ 0.95
CPSF1-207ENST00000531727 ELP3Q9H9T3 547 aa20.97■□□□□ 0.95
CPSF1-207ENST00000531727 TMOD2Q9NZR1 351 aa20.97■□□□□ 0.95
CPSF1-207ENST00000531727 HPS5Q9UPZ3 1129 aa20.97■□□□□ 0.95
CPSF1-207ENST00000531727 IL15P40933 162 aaPredicted RBP20.96■□□□□ 0.95
CPSF1-207ENST00000531727 FKBP1CQ5VVH2 108 aa20.96■□□□□ 0.95
CPSF1-207ENST00000531727 HHIPL2Q6UWX4 724 aa20.96■□□□□ 0.95
CPSF1-207ENST00000531727 FAM83AQ86UY5 434 aa20.96■□□□□ 0.95
CPSF1-207ENST00000531727 OPTNQ96CV9 577 aa20.96■□□□□ 0.95
CPSF1-207ENST00000531727 MAP3K9P80192 1104 aa20.95■□□□□ 0.94
CPSF1-207ENST00000531727 INTS3Q68E01 1043 aaKnown RBP20.95■□□□□ 0.94
CPSF1-207ENST00000531727 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.95■□□□□ 0.94
CPSF1-207ENST00000531727 COPRSQ9NQ92 184 aa20.95■□□□□ 0.94
CPSF1-207ENST00000531727 PA2G4Q9UQ80 394 aaKnown RBP20.95■□□□□ 0.94
CPSF1-207ENST00000531727 TESPA1A2RU30 521 aaPredicted RBP20.94■□□□□ 0.94
CPSF1-207ENST00000531727 SOX10P56693 466 aa20.94■□□□□ 0.94
CPSF1-207ENST00000531727 OTUD7BQ6GQQ9 843 aa20.94■□□□□ 0.94
CPSF1-207ENST00000531727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.94■□□□□ 0.94
CPSF1-207ENST00000531727 GNL3LQ9NVN8 582 aaKnown RBP20.94■□□□□ 0.94
CPSF1-207ENST00000531727 GNAI3P08754 354 aa20.93■□□□□ 0.94
CPSF1-207ENST00000531727 VGLL4Q14135 290 aa20.93■□□□□ 0.94
CPSF1-207ENST00000531727 FBXO46Q6PJ61 603 aaPredicted RBP20.93■□□□□ 0.94
CPSF1-207ENST00000531727 CSADQ9Y600 493 aa20.93■□□□□ 0.94
CPSF1-207ENST00000531727 HOOK2Q96ED9 719 aa20.92■□□□□ 0.94
CPSF1-207ENST00000531727 PTPN18Q99952 460 aa20.92■□□□□ 0.94
CPSF1-207ENST00000531727 RPAP1Q9BWH6 1393 aaPredicted RBP20.92■□□□□ 0.94
CPSF1-207ENST00000531727 SEMA3EO15041 775 aa20.91■□□□□ 0.94
CPSF1-207ENST00000531727 ZBTB22O15209 634 aa20.91■□□□□ 0.94
CPSF1-207ENST00000531727 IPO8O15397 1037 aaKnown RBP20.91■□□□□ 0.94
CPSF1-207ENST00000531727 PRDX5P30044 214 aa20.91■□□□□ 0.94
CPSF1-207ENST00000531727 PHKA1P46020 1223 aa20.91■□□□□ 0.94
CPSF1-207ENST00000531727 CNKSR2Q8WXI2 1034 aa20.91■□□□□ 0.94
CPSF1-207ENST00000531727 MS4A4AQ96JQ5 239 aa20.91■□□□□ 0.94
CPSF1-207ENST00000531727 SALL1Q9NSC2 1324 aa20.91■□□□□ 0.94
CPSF1-207ENST00000531727 DENND2AQ9ULE3 1009 aa20.91■□□□□ 0.94
CPSF1-207ENST00000531727 DAGLAQ9Y4D2 1042 aa20.91■□□□□ 0.94
CPSF1-207ENST00000531727 LDHBP07195 334 aaKnown RBP20.9■□□□□ 0.94
CPSF1-207ENST00000531727 CRHR2Q13324 411 aa20.9■□□□□ 0.94
CPSF1-207ENST00000531727 MTX1Q13505 466 aa20.9■□□□□ 0.94
CPSF1-207ENST00000531727 TNRC18O15417 2968 aaPredicted RBP20.89■□□□□ 0.94
CPSF1-207ENST00000531727 SRGAP3O43295 1099 aa20.89■□□□□ 0.93
CPSF1-207ENST00000531727 TRIM27P14373 513 aa20.89■□□□□ 0.93
CPSF1-207ENST00000531727 ADORA1P30542 326 aa20.89■□□□□ 0.93
CPSF1-207ENST00000531727 DIXDC1Q155Q3 683 aa20.89■□□□□ 0.93
CPSF1-207ENST00000531727 DCAF15Q66K64 600 aa20.89■□□□□ 0.93
CPSF1-207ENST00000531727 FAM151AQ8WW52 585 aa20.89■□□□□ 0.93
CPSF1-207ENST00000531727 OTUD5Q96G74 571 aa20.89■□□□□ 0.93
CPSF1-207ENST00000531727 WRNIP1Q96S55 665 aa20.89■□□□□ 0.93
CPSF1-207ENST00000531727 SNCAIPQ9Y6H5 919 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms