RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 GRIK5Q16478 980 aa27.81■■■□□ 2.04
TRAPPC4-210ENST00000531290 INHBEP58166 350 aa27.8■■■□□ 2.04
TRAPPC4-210ENST00000531290 CTU1Q7Z7A3 348 aaKnown RBP27.8■■■□□ 2.04
TRAPPC4-210ENST00000531290 TEKT1Q969V4 418 aa27.8■■■□□ 2.04
TRAPPC4-210ENST00000531290 CLMNQ96JQ2 1002 aa27.8■■■□□ 2.04
TRAPPC4-210ENST00000531290 FBXO3Q9UK99 471 aa27.8■■■□□ 2.04
TRAPPC4-210ENST00000531290 MANSC4A6NHS7 340 aaPredicted RBP27.79■■■□□ 2.04
TRAPPC4-210ENST00000531290 TCP10L2B9ZVM9 353 aa27.79■■■□□ 2.04
TRAPPC4-210ENST00000531290 USP2O75604 605 aaPredicted RBP27.79■■■□□ 2.04
TRAPPC4-210ENST00000531290 DIEXFQ68CQ4 756 aaKnown RBP27.79■■■□□ 2.04
TRAPPC4-210ENST00000531290 SIL1Q9H173 461 aa27.79■■■□□ 2.04
TRAPPC4-210ENST00000531290 CEP126Q9P2H0 1117 aa27.79■■■□□ 2.04
TRAPPC4-210ENST00000531290 SUGT1Q9Y2Z0 365 aa27.79■■■□□ 2.04
TRAPPC4-210ENST00000531290 A0A1B0GUL6 1792 aa27.78■■■□□ 2.04
TRAPPC4-210ENST00000531290 ZBTB48P10074 688 aaPredicted RBP27.78■■■□□ 2.04
TRAPPC4-210ENST00000531290 ATG9AQ7Z3C6 839 aa27.78■■■□□ 2.04
TRAPPC4-210ENST00000531290 MRIQ9BWK5 157 aa27.78■■■□□ 2.04
TRAPPC4-210ENST00000531290 LRRFIP2Q9Y608 721 aaKnown RBP27.78■■■□□ 2.04
TRAPPC4-210ENST00000531290 CASP8AP2Q9UKL3 1982 aa27.78■■■□□ 2.04
TRAPPC4-210ENST00000531290 CIAO1O76071 339 aa27.77■■■□□ 2.04
TRAPPC4-210ENST00000531290 ALDH1A1P00352 501 aa27.77■■■□□ 2.04
TRAPPC4-210ENST00000531290 ANKRD13AQ8IZ07 590 aa27.77■■■□□ 2.04
TRAPPC4-210ENST00000531290 ZNF296Q8WUU4 475 aaPredicted RBP27.77■■■□□ 2.04
TRAPPC4-210ENST00000531290 ARHGAP45Q92619 1136 aa27.77■■■□□ 2.04
TRAPPC4-210ENST00000531290 WNK4Q96J92 1243 aa27.77■■■□□ 2.04
TRAPPC4-210ENST00000531290 SSC5DA1L4H1 1573 aa27.77■■■□□ 2.04
TRAPPC4-210ENST00000531290 MAST3O60307 1309 aa27.76■■■□□ 2.03
TRAPPC4-210ENST00000531290 GPR25O00155 361 aa27.76■■■□□ 2.03
TRAPPC4-210ENST00000531290 WDR66Q8TBY9 1149 aa27.76■■■□□ 2.03
TRAPPC4-210ENST00000531290 NOM1Q5C9Z4 860 aaKnown RBP27.75■■■□□ 2.03
TRAPPC4-210ENST00000531290 ZDHHC15Q96MV8 337 aa27.75■■■□□ 2.03
TRAPPC4-210ENST00000531290 TMEM39BQ9GZU3 492 aa27.75■■■□□ 2.03
TRAPPC4-210ENST00000531290 TMOD2Q9NZR1 351 aa27.75■■■□□ 2.03
TRAPPC4-210ENST00000531290 IPO8O15397 1037 aaKnown RBP27.74■■■□□ 2.03
TRAPPC4-210ENST00000531290 IL15P40933 162 aaPredicted RBP27.74■■■□□ 2.03
TRAPPC4-210ENST00000531290 RGS19P49795 217 aa27.74■■■□□ 2.03
TRAPPC4-210ENST00000531290 MLLT1Q03111 559 aaPredicted RBP27.74■■■□□ 2.03
TRAPPC4-210ENST00000531290 ATP2B3Q16720 1220 aa27.74■■■□□ 2.03
TRAPPC4-210ENST00000531290 TEPSINQ96N21 525 aa27.74■■■□□ 2.03
TRAPPC4-210ENST00000531290 MEIS3Q99687 375 aa27.74■■■□□ 2.03
TRAPPC4-210ENST00000531290 GNL3LQ9NVN8 582 aaKnown RBP27.74■■■□□ 2.03
TRAPPC4-210ENST00000531290 INTS3Q68E01 1043 aaKnown RBP27.73■■■□□ 2.03
TRAPPC4-210ENST00000531290 IFNL1Q8IU54 200 aa27.73■■■□□ 2.03
TRAPPC4-210ENST00000531290 CFHR5Q9BXR6 569 aa27.73■■■□□ 2.03
TRAPPC4-210ENST00000531290 GNAI3P08754 354 aa27.72■■■□□ 2.03
TRAPPC4-210ENST00000531290 PKN2Q16513 984 aaKnown RBP27.72■■■□□ 2.03
TRAPPC4-210ENST00000531290 FKTNO75072 461 aa27.71■■■□□ 2.03
TRAPPC4-210ENST00000531290 CACNB3P54284 484 aa27.71■■■□□ 2.03
TRAPPC4-210ENST00000531290 OTUD7BQ6GQQ9 843 aa27.71■■■□□ 2.03
TRAPPC4-210ENST00000531290 APOBEC3HQ6NTF7 200 aaKnown RBP27.71■■■□□ 2.03
TRAPPC4-210ENST00000531290 HHIPL2Q6UWX4 724 aa27.71■■■□□ 2.03
TRAPPC4-210ENST00000531290 CDAN1Q8IWY9 1227 aa27.71■■■□□ 2.03
TRAPPC4-210ENST00000531290 ELP3Q9H9T3 547 aa27.71■■■□□ 2.03
TRAPPC4-210ENST00000531290 COPRSQ9NQ92 184 aa27.71■■■□□ 2.03
TRAPPC4-210ENST00000531290 PA2G4Q9UQ80 394 aaKnown RBP27.71■■■□□ 2.03
TRAPPC4-210ENST00000531290 MAP3K9P80192 1104 aa27.69■■■□□ 2.02
TRAPPC4-210ENST00000531290 FKBP1CQ5VVH2 108 aa27.69■■■□□ 2.02
TRAPPC4-210ENST00000531290 R3HDMLQ9H3Y0 253 aa27.69■■■□□ 2.02
TRAPPC4-210ENST00000531290 AKAP11Q9UKA4 1901 aa27.69■■■□□ 2.02
TRAPPC4-210ENST00000531290 GJA5P36382 358 aa27.68■■■□□ 2.02
TRAPPC4-210ENST00000531290 FAM83AQ86UY5 434 aa27.68■■■□□ 2.02
TRAPPC4-210ENST00000531290 FRAT1Q92837 279 aaPredicted RBP27.68■■■□□ 2.02
TRAPPC4-210ENST00000531290 OPTNQ96CV9 577 aa27.68■■■□□ 2.02
TRAPPC4-210ENST00000531290 HOOK2Q96ED9 719 aa27.68■■■□□ 2.02
TRAPPC4-210ENST00000531290 CSADQ9Y600 493 aa27.68■■■□□ 2.02
TRAPPC4-210ENST00000531290 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.67■■■□□ 2.02
TRAPPC4-210ENST00000531290 DENND2AQ9ULE3 1009 aa27.67■■■□□ 2.02
TRAPPC4-210ENST00000531290 IGF2BP3O00425 579 aaKnown RBP eCLIP27.66■■■□□ 2.02
TRAPPC4-210ENST00000531290 SRGAP3O43295 1099 aa27.66■■■□□ 2.02
TRAPPC4-210ENST00000531290 HPS5Q9UPZ3 1129 aa27.66■■■□□ 2.02
TRAPPC4-210ENST00000531290 SEMA3EO15041 775 aa27.65■■■□□ 2.02
TRAPPC4-210ENST00000531290 LDHBP07195 334 aaKnown RBP27.65■■■□□ 2.02
TRAPPC4-210ENST00000531290 ATF7IPQ6VMQ6 1270 aa27.65■■■□□ 2.02
TRAPPC4-210ENST00000531290 BCAR3O75815 825 aa27.64■■■□□ 2.02
TRAPPC4-210ENST00000531290 TRIM27P14373 513 aa27.64■■■□□ 2.02
TRAPPC4-210ENST00000531290 PHKA1P46020 1223 aa27.64■■■□□ 2.02
TRAPPC4-210ENST00000531290 VGLL4Q14135 290 aa27.64■■■□□ 2.02
TRAPPC4-210ENST00000531290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.64■■■□□ 2.02
TRAPPC4-210ENST00000531290 TESPA1A2RU30 521 aaPredicted RBP27.63■■■□□ 2.01
TRAPPC4-210ENST00000531290 AKAP2Q9Y2D5 859 aa27.63■■■□□ 2.01
TRAPPC4-210ENST00000531290 GNAI2P04899 355 aa27.62■■■□□ 2.01
TRAPPC4-210ENST00000531290 PRDX5P30044 214 aa27.62■■■□□ 2.01
TRAPPC4-210ENST00000531290 ADORA1P30542 326 aa27.62■■■□□ 2.01
TRAPPC4-210ENST00000531290 TIMM10P62072 90 aa27.62■■■□□ 2.01
TRAPPC4-210ENST00000531290 MTX1Q13505 466 aa27.62■■■□□ 2.01
TRAPPC4-210ENST00000531290 DIXDC1Q155Q3 683 aa27.62■■■□□ 2.01
TRAPPC4-210ENST00000531290 CCDC102BQ68D86 513 aa27.62■■■□□ 2.01
TRAPPC4-210ENST00000531290 MIER1Q8N108 512 aa27.62■■■□□ 2.01
TRAPPC4-210ENST00000531290 DAGLAQ9Y4D2 1042 aa27.62■■■□□ 2.01
TRAPPC4-210ENST00000531290 GTF2A2P52657 109 aa27.61■■■□□ 2.01
TRAPPC4-210ENST00000531290 SOX10P56693 466 aa27.61■■■□□ 2.01
TRAPPC4-210ENST00000531290 DCAF15Q66K64 600 aa27.61■■■□□ 2.01
TRAPPC4-210ENST00000531290 FBXO46Q6PJ61 603 aaPredicted RBP27.61■■■□□ 2.01
TRAPPC4-210ENST00000531290 ZGPATQ8N5A5 531 aaKnown RBP27.61■■■□□ 2.01
TRAPPC4-210ENST00000531290 CNKSR2Q8WXI2 1034 aa27.61■■■□□ 2.01
TRAPPC4-210ENST00000531290 CLUAP1Q96AJ1 413 aa27.61■■■□□ 2.01
TRAPPC4-210ENST00000531290 WRNIP1Q96S55 665 aa27.61■■■□□ 2.01
TRAPPC4-210ENST00000531290 PTPN18Q99952 460 aa27.61■■■□□ 2.01
TRAPPC4-210ENST00000531290 SALL1Q9NSC2 1324 aa27.61■■■□□ 2.01
TRAPPC4-210ENST00000531290 ECM29Q5VYK3 1845 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms