RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 INTS3Q68E01 1043 aaKnown RBP20.79■□□□□ 0.92
GSDMD-210ENST00000531173 CDAN1Q8IWY9 1227 aa20.79■□□□□ 0.92
GSDMD-210ENST00000531173 CLMNQ96JQ2 1002 aa20.79■□□□□ 0.92
GSDMD-210ENST00000531173 TDRD3Q9H7E2 651 aaKnown RBP20.79■□□□□ 0.92
GSDMD-210ENST00000531173 FBXO3Q9UK99 471 aa20.79■□□□□ 0.92
GSDMD-210ENST00000531173 LRRFIP2Q9Y608 721 aaKnown RBP20.79■□□□□ 0.92
GSDMD-210ENST00000531173 USP2O75604 605 aaPredicted RBP20.78■□□□□ 0.92
GSDMD-210ENST00000531173 MKRN3Q13064 507 aaKnown RBP20.78■□□□□ 0.92
GSDMD-210ENST00000531173 CHAF1AQ13111 956 aaPredicted RBP20.78■□□□□ 0.92
GSDMD-210ENST00000531173 MEIS3Q99687 375 aa20.78■□□□□ 0.92
GSDMD-210ENST00000531173 MRIQ9BWK5 157 aa20.78■□□□□ 0.92
GSDMD-210ENST00000531173 CFHR5Q9BXR6 569 aa20.78■□□□□ 0.92
GSDMD-210ENST00000531173 TNRC18O15417 2968 aaPredicted RBP20.77■□□□□ 0.92
GSDMD-210ENST00000531173 PPP1R12BO60237 982 aaPredicted RBP20.77■□□□□ 0.92
GSDMD-210ENST00000531173 IFIT1P09914 478 aaKnown RBP20.77■□□□□ 0.92
GSDMD-210ENST00000531173 NOM1Q5C9Z4 860 aaKnown RBP20.77■□□□□ 0.92
GSDMD-210ENST00000531173 LPIN2Q92539 896 aa20.77■□□□□ 0.92
GSDMD-210ENST00000531173 SUGT1Q9Y2Z0 365 aa20.77■□□□□ 0.92
GSDMD-210ENST00000531173 ZBTB48P10074 688 aaPredicted RBP20.76■□□□□ 0.91
GSDMD-210ENST00000531173 RGS19P49795 217 aa20.76■□□□□ 0.91
GSDMD-210ENST00000531173 TNFAIP1Q13829 316 aa20.76■□□□□ 0.91
GSDMD-210ENST00000531173 ZDHHC15Q96MV8 337 aa20.76■□□□□ 0.91
GSDMD-210ENST00000531173 COPRSQ9NQ92 184 aa20.76■□□□□ 0.91
GSDMD-210ENST00000531173 CCDC85CA6NKD9 419 aa20.75■□□□□ 0.91
GSDMD-210ENST00000531173 ZBTB22O15209 634 aa20.75■□□□□ 0.91
GSDMD-210ENST00000531173 TBC1D8O95759 1140 aa20.75■□□□□ 0.91
GSDMD-210ENST00000531173 SLC5A1P13866 664 aa20.75■□□□□ 0.91
GSDMD-210ENST00000531173 SREBF2Q12772 1141 aa20.75■□□□□ 0.91
GSDMD-210ENST00000531173 APOBEC3HQ6NTF7 200 aaKnown RBP20.75■□□□□ 0.91
GSDMD-210ENST00000531173 WNK4Q96J92 1243 aa20.75■□□□□ 0.91
GSDMD-210ENST00000531173 SIL1Q9H173 461 aa20.75■□□□□ 0.91
GSDMD-210ENST00000531173 R3HDMLQ9H3Y0 253 aa20.75■□□□□ 0.91
GSDMD-210ENST00000531173 TRIM27P14373 513 aa20.74■□□□□ 0.91
GSDMD-210ENST00000531173 GJA5P36382 358 aa20.74■□□□□ 0.91
GSDMD-210ENST00000531173 MTX1Q13505 466 aa20.74■□□□□ 0.91
GSDMD-210ENST00000531173 TEKT1Q969V4 418 aa20.74■□□□□ 0.91
GSDMD-210ENST00000531173 SLC10A4Q96EP9 437 aa20.74■□□□□ 0.91
GSDMD-210ENST00000531173 TMEM39BQ9GZU3 492 aa20.74■□□□□ 0.91
GSDMD-210ENST00000531173 PA2G4Q9UQ80 394 aaKnown RBP20.74■□□□□ 0.91
GSDMD-210ENST00000531173 FRAT2O75474 233 aaPredicted RBP20.73■□□□□ 0.91
GSDMD-210ENST00000531173 ATP2B3Q16720 1220 aa20.73■□□□□ 0.91
GSDMD-210ENST00000531173 CTU1Q7Z7A3 348 aaKnown RBP20.73■□□□□ 0.91
GSDMD-210ENST00000531173 ZNF296Q8WUU4 475 aaPredicted RBP20.73■□□□□ 0.91
GSDMD-210ENST00000531173 TNNQ9UQP3 1299 aa20.73■□□□□ 0.91
GSDMD-210ENST00000531173 PDE4DIPQ5VU43 2346 aa20.73■□□□□ 0.91
GSDMD-210ENST00000531173 MANSC4A6NHS7 340 aaPredicted RBP20.72■□□□□ 0.91
GSDMD-210ENST00000531173 TCP10L2B9ZVM9 353 aa20.72■□□□□ 0.91
GSDMD-210ENST00000531173 IL15P40933 162 aaPredicted RBP20.72■□□□□ 0.91
GSDMD-210ENST00000531173 IREB2P48200 963 aaKnown RBP20.72■□□□□ 0.91
GSDMD-210ENST00000531173 CACNB3P54284 484 aa20.72■□□□□ 0.91
GSDMD-210ENST00000531173 FKBP1CQ5VVH2 108 aa20.72■□□□□ 0.91
GSDMD-210ENST00000531173 HHIPL2Q6UWX4 724 aa20.72■□□□□ 0.91
GSDMD-210ENST00000531173 ANKRD13AQ8IZ07 590 aa20.72■□□□□ 0.91
GSDMD-210ENST00000531173 WDR66Q8TBY9 1149 aa20.72■□□□□ 0.91
GSDMD-210ENST00000531173 CEP126Q9P2H0 1117 aa20.72■□□□□ 0.91
GSDMD-210ENST00000531173 HDAC5Q9UQL6 1122 aa20.72■□□□□ 0.91
GSDMD-210ENST00000531173 GPR25O00155 361 aa20.71■□□□□ 0.91
GSDMD-210ENST00000531173 IGF2BP3O00425 579 aaKnown RBP eCLIP20.71■□□□□ 0.91
GSDMD-210ENST00000531173 BCAR3O75815 825 aa20.71■□□□□ 0.91
GSDMD-210ENST00000531173 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.71■□□□□ 0.91
GSDMD-210ENST00000531173 IFNL1Q8IU54 200 aa20.71■□□□□ 0.91
GSDMD-210ENST00000531173 MAST3O60307 1309 aa20.71■□□□□ 0.91
GSDMD-210ENST00000531173 CENPFP49454 3210 aa20.7■□□□□ 0.9
GSDMD-210ENST00000531173 INHBEP58166 350 aa20.7■□□□□ 0.9
GSDMD-210ENST00000531173 FAM83AQ86UY5 434 aa20.7■□□□□ 0.9
GSDMD-210ENST00000531173 TESPA1A2RU30 521 aaPredicted RBP20.69■□□□□ 0.9
GSDMD-210ENST00000531173 GNAI3P08754 354 aa20.69■□□□□ 0.9
GSDMD-210ENST00000531173 ADORA1P30542 326 aa20.69■□□□□ 0.9
GSDMD-210ENST00000531173 PHKA1P46020 1223 aa20.69■□□□□ 0.9
GSDMD-210ENST00000531173 TNNI2P48788 182 aa20.69■□□□□ 0.9
GSDMD-210ENST00000531173 HNRNPUQ00839 825 aaKnown RBP eCLIP20.69■□□□□ 0.9
GSDMD-210ENST00000531173 ATF7IPQ6VMQ6 1270 aa20.69■□□□□ 0.9
GSDMD-210ENST00000531173 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.69■□□□□ 0.9
GSDMD-210ENST00000531173 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.69■□□□□ 0.9
GSDMD-210ENST00000531173 SALL1Q9NSC2 1324 aa20.69■□□□□ 0.9
GSDMD-210ENST00000531173 RPAP1Q9BWH6 1393 aaPredicted RBP20.69■□□□□ 0.9
GSDMD-210ENST00000531173 ALDH1A1P00352 501 aa20.68■□□□□ 0.9
GSDMD-210ENST00000531173 PRDX5P30044 214 aa20.68■□□□□ 0.9
GSDMD-210ENST00000531173 PTPN18Q99952 460 aa20.68■□□□□ 0.9
GSDMD-210ENST00000531173 SEMA3EO15041 775 aa20.67■□□□□ 0.9
GSDMD-210ENST00000531173 IPO8O15397 1037 aaKnown RBP20.67■□□□□ 0.9
GSDMD-210ENST00000531173 SRGAP3O43295 1099 aa20.67■□□□□ 0.9
GSDMD-210ENST00000531173 VGLL4Q14135 290 aa20.67■□□□□ 0.9
GSDMD-210ENST00000531173 DIXDC1Q155Q3 683 aa20.67■□□□□ 0.9
GSDMD-210ENST00000531173 CNKSR2Q8WXI2 1034 aa20.67■□□□□ 0.9
GSDMD-210ENST00000531173 MS4A4AQ96JQ5 239 aa20.67■□□□□ 0.9
GSDMD-210ENST00000531173 YTHDC1Q96MU7 727 aaKnown RBP20.67■□□□□ 0.9
GSDMD-210ENST00000531173 ELP3Q9H9T3 547 aa20.67■□□□□ 0.9
GSDMD-210ENST00000531173 DAGLAQ9Y4D2 1042 aa20.67■□□□□ 0.9
GSDMD-210ENST00000531173 MYH2Q9UKX2 1941 aa20.66■□□□□ 0.9
GSDMD-210ENST00000531173 CCDC102BQ68D86 513 aa20.66■□□□□ 0.9
GSDMD-210ENST00000531173 OPTNQ96CV9 577 aa20.66■□□□□ 0.9
GSDMD-210ENST00000531173 GNL3LQ9NVN8 582 aaKnown RBP20.66■□□□□ 0.9
GSDMD-210ENST00000531173 ZBED9Q6R2W3 1325 aa20.66■□□□□ 0.9
GSDMD-210ENST00000531173 PDS5AQ29RF7 1337 aaKnown RBP20.65■□□□□ 0.9
GSDMD-210ENST00000531173 MAP3K9P80192 1104 aa20.65■□□□□ 0.9
GSDMD-210ENST00000531173 RASGRF1Q13972 1273 aa20.65■□□□□ 0.9
GSDMD-210ENST00000531173 PKN2Q16513 984 aaKnown RBP20.65■□□□□ 0.9
GSDMD-210ENST00000531173 FKTNO75072 461 aa20.64■□□□□ 0.89
GSDMD-210ENST00000531173 TIMM10P62072 90 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms