RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 SLC10A4Q96EP9 437 aa19.37■□□□□ 0.69
CTSB-220ENST00000531089 PPP1R12BO60237 982 aaPredicted RBP19.36■□□□□ 0.69
CTSB-220ENST00000531089 CRKP46108 304 aa19.36■□□□□ 0.69
CTSB-220ENST00000531089 SPDYE2Q495Y8 402 aa19.36■□□□□ 0.69
CTSB-220ENST00000531089 SSC5DA1L4H1 1573 aa19.36■□□□□ 0.69
CTSB-220ENST00000531089 ZKSCAN2Q63HK3 967 aa19.35■□□□□ 0.69
CTSB-220ENST00000531089 CLMNQ96JQ2 1002 aa19.35■□□□□ 0.69
CTSB-220ENST00000531089 MRIQ9BWK5 157 aa19.35■□□□□ 0.69
CTSB-220ENST00000531089 UNCXA6NJT0 531 aa19.34■□□□□ 0.69
CTSB-220ENST00000531089 TRIM27P14373 513 aa19.34■□□□□ 0.69
CTSB-220ENST00000531089 HDLBPQ00341 1268 aaKnown RBP19.34■□□□□ 0.69
CTSB-220ENST00000531089 CHAF1AQ13111 956 aaPredicted RBP19.34■□□□□ 0.69
CTSB-220ENST00000531089 TEPSINQ96N21 525 aa19.34■□□□□ 0.69
CTSB-220ENST00000531089 R3HDMLQ9H3Y0 253 aa19.34■□□□□ 0.69
CTSB-220ENST00000531089 FRAT2O75474 233 aaPredicted RBP19.34■□□□□ 0.69
CTSB-220ENST00000531089 IFIT1P09914 478 aaKnown RBP19.34■□□□□ 0.69
CTSB-220ENST00000531089 PUM3Q15397 648 aaKnown RBP19.34■□□□□ 0.69
CTSB-220ENST00000531089 TBC1D22AQ8WUA7 517 aa19.34■□□□□ 0.69
CTSB-220ENST00000531089 CLUAP1Q96AJ1 413 aa19.34■□□□□ 0.69
CTSB-220ENST00000531089 GNAI3P08754 354 aa19.33■□□□□ 0.68
CTSB-220ENST00000531089 ZNF296Q8WUU4 475 aaPredicted RBP19.33■□□□□ 0.68
CTSB-220ENST00000531089 CFHR5Q9BXR6 569 aa19.33■□□□□ 0.68
CTSB-220ENST00000531089 INHBEP58166 350 aa19.32■□□□□ 0.68
CTSB-220ENST00000531089 SREBF2Q12772 1141 aa19.32■□□□□ 0.68
CTSB-220ENST00000531089 CTU1Q7Z7A3 348 aaKnown RBP19.32■□□□□ 0.68
CTSB-220ENST00000531089 CDAN1Q8IWY9 1227 aa19.32■□□□□ 0.68
CTSB-220ENST00000531089 ARAP2Q8WZ64 1704 aa19.32■□□□□ 0.68
CTSB-220ENST00000531089 LPIN2Q92539 896 aa19.32■□□□□ 0.68
CTSB-220ENST00000531089 WNK4Q96J92 1243 aa19.32■□□□□ 0.68
CTSB-220ENST00000531089 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.32■□□□□ 0.68
CTSB-220ENST00000531089 FBXO3Q9UK99 471 aa19.32■□□□□ 0.68
CTSB-220ENST00000531089 TCP10L2B9ZVM9 353 aa19.31■□□□□ 0.68
CTSB-220ENST00000531089 GPR25O00155 361 aa19.31■□□□□ 0.68
CTSB-220ENST00000531089 TNFAIP1Q13829 316 aa19.31■□□□□ 0.68
CTSB-220ENST00000531089 NOM1Q5C9Z4 860 aaKnown RBP19.31■□□□□ 0.68
CTSB-220ENST00000531089 MEIS3Q99687 375 aa19.31■□□□□ 0.68
CTSB-220ENST00000531089 TNNQ9UQP3 1299 aa19.31■□□□□ 0.68
CTSB-220ENST00000531089 LRRFIP2Q9Y608 721 aaKnown RBP19.31■□□□□ 0.68
CTSB-220ENST00000531089 MANSC4A6NHS7 340 aaPredicted RBP19.3■□□□□ 0.68
CTSB-220ENST00000531089 CIAO1O76071 339 aa19.3■□□□□ 0.68
CTSB-220ENST00000531089 ZBTB48P10074 688 aaPredicted RBP19.3■□□□□ 0.68
CTSB-220ENST00000531089 GJA5P36382 358 aa19.3■□□□□ 0.68
CTSB-220ENST00000531089 IREB2P48200 963 aaKnown RBP19.3■□□□□ 0.68
CTSB-220ENST00000531089 APOBEC3HQ6NTF7 200 aaKnown RBP19.3■□□□□ 0.68
CTSB-220ENST00000531089 ZDHHC15Q96MV8 337 aa19.3■□□□□ 0.68
CTSB-220ENST00000531089 TMEM39BQ9GZU3 492 aa19.3■□□□□ 0.68
CTSB-220ENST00000531089 SIL1Q9H173 461 aa19.3■□□□□ 0.68
CTSB-220ENST00000531089 SUGT1Q9Y2Z0 365 aa19.3■□□□□ 0.68
CTSB-220ENST00000531089 SLC5A1P13866 664 aa19.29■□□□□ 0.68
CTSB-220ENST00000531089 IFNL1Q8IU54 200 aa19.29■□□□□ 0.68
CTSB-220ENST00000531089 FTSJ3Q8IY81 847 aaKnown RBP19.29■□□□□ 0.68
CTSB-220ENST00000531089 ANKRD13AQ8IZ07 590 aa19.29■□□□□ 0.68
CTSB-220ENST00000531089 TEKT1Q969V4 418 aa19.29■□□□□ 0.68
CTSB-220ENST00000531089 CEP126Q9P2H0 1117 aa19.29■□□□□ 0.68
CTSB-220ENST00000531089 PA2G4Q9UQ80 394 aaKnown RBP19.29■□□□□ 0.68
CTSB-220ENST00000531089 HHIPL2Q6UWX4 724 aa19.28■□□□□ 0.68
CTSB-220ENST00000531089 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.28■□□□□ 0.68
CTSB-220ENST00000531089 COPRSQ9NQ92 184 aa19.28■□□□□ 0.68
CTSB-220ENST00000531089 TNRC18O15417 2968 aaPredicted RBP19.28■□□□□ 0.68
CTSB-220ENST00000531089 LAMB1P07942 1786 aa19.27■□□□□ 0.68
CTSB-220ENST00000531089 IGF2BP3O00425 579 aaKnown RBP eCLIP19.27■□□□□ 0.684e-7■■□□□ 11.8
CTSB-220ENST00000531089 ALDH1A1P00352 501 aa19.27■□□□□ 0.68
CTSB-220ENST00000531089 TNNI2P48788 182 aa19.27■□□□□ 0.68
CTSB-220ENST00000531089 CACNB3P54284 484 aa19.27■□□□□ 0.68
CTSB-220ENST00000531089 TMEM57Q8N5G2 664 aa19.27■□□□□ 0.68
CTSB-220ENST00000531089 WDR66Q8TBY9 1149 aa19.27■□□□□ 0.68
CTSB-220ENST00000531089 MYH13Q9UKX3 1938 aa19.27■□□□□ 0.68
CTSB-220ENST00000531089 IL15P40933 162 aaPredicted RBP19.26■□□□□ 0.67
CTSB-220ENST00000531089 MLLT1Q03111 559 aaPredicted RBP19.26■□□□□ 0.67
CTSB-220ENST00000531089 PTPN18Q99952 460 aa19.26■□□□□ 0.67
CTSB-220ENST00000531089 TESPA1A2RU30 521 aaPredicted RBP19.25■□□□□ 0.67
CTSB-220ENST00000531089 GNAI2P04899 355 aa19.25■□□□□ 0.67
CTSB-220ENST00000531089 MAP3K9P80192 1104 aa19.25■□□□□ 0.67
CTSB-220ENST00000531089 PKN2Q16513 984 aaKnown RBP19.25■□□□□ 0.67
CTSB-220ENST00000531089 ATP2B3Q16720 1220 aa19.25■□□□□ 0.67
CTSB-220ENST00000531089 FKBP1CQ5VVH2 108 aa19.25■□□□□ 0.67
CTSB-220ENST00000531089 OTOFQ9HC10 1997 aa19.25■□□□□ 0.67
CTSB-220ENST00000531089 FKTNO75072 461 aa19.25■□□□□ 0.67
CTSB-220ENST00000531089 FAM83AQ86UY5 434 aa19.25■□□□□ 0.67
CTSB-220ENST00000531089 MS4A4AQ96JQ5 239 aa19.25■□□□□ 0.67
CTSB-220ENST00000531089 ELP3Q9H9T3 547 aa19.25■□□□□ 0.67
CTSB-220ENST00000531089 ZBTB22O15209 634 aa19.24■□□□□ 0.67
CTSB-220ENST00000531089 MS4A1P11836 297 aa19.24■□□□□ 0.67
CTSB-220ENST00000531089 TIMM10P62072 90 aa19.24■□□□□ 0.67
CTSB-220ENST00000531089 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.24■□□□□ 0.672e-23■□□□□ 11.3
CTSB-220ENST00000531089 CNKSR2Q8WXI2 1034 aa19.24■□□□□ 0.67
CTSB-220ENST00000531089 OPTNQ96CV9 577 aa19.24■□□□□ 0.67
CTSB-220ENST00000531089 MAST3O60307 1309 aa19.23■□□□□ 0.67
CTSB-220ENST00000531089 PHKA1P46020 1223 aa19.23■□□□□ 0.67
CTSB-220ENST00000531089 RCAN3Q9UKA8 241 aa19.23■□□□□ 0.67
CTSB-220ENST00000531089 HPS5Q9UPZ3 1129 aa19.23■□□□□ 0.67
CTSB-220ENST00000531089 SRGAP3O43295 1099 aa19.22■□□□□ 0.67
CTSB-220ENST00000531089 PRDX5P30044 214 aa19.22■□□□□ 0.67
CTSB-220ENST00000531089 ADORA1P30542 326 aa19.22■□□□□ 0.67
CTSB-220ENST00000531089 MTX1Q13505 466 aa19.22■□□□□ 0.67
CTSB-220ENST00000531089 VGLL4Q14135 290 aa19.22■□□□□ 0.67
CTSB-220ENST00000531089 ITPRIPQ8IWB1 547 aa19.22■□□□□ 0.67
CTSB-220ENST00000531089 GNL3LQ9NVN8 582 aaKnown RBP19.22■□□□□ 0.67
CTSB-220ENST00000531089 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.22■□□□□ 0.67
CTSB-220ENST00000531089 AK9Q5TCS8 1911 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms