RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 IFIT1P09914 478 aaKnown RBP19.75■□□□□ 0.75
CPSF1-205ENST00000531042 HDLBPQ00341 1268 aaKnown RBP19.75■□□□□ 0.75
CPSF1-205ENST00000531042 ZNF296Q8WUU4 475 aaPredicted RBP19.75■□□□□ 0.75
CPSF1-205ENST00000531042 CFHR5Q9BXR6 569 aa19.75■□□□□ 0.75
CPSF1-205ENST00000531042 LAMB1P07942 1786 aa19.75■□□□□ 0.75
CPSF1-205ENST00000531042 UBTFL1P0CB47 393 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-205ENST00000531042 ZBTB48P10074 688 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-205ENST00000531042 IREB2P48200 963 aaKnown RBP19.74■□□□□ 0.75
CPSF1-205ENST00000531042 NOM1Q5C9Z4 860 aaKnown RBP19.74■□□□□ 0.75
CPSF1-205ENST00000531042 ATG9AQ7Z3C6 839 aa19.74■□□□□ 0.75
CPSF1-205ENST00000531042 WNK4Q96J92 1243 aa19.74■□□□□ 0.75
CPSF1-205ENST00000531042 API5Q9BZZ5 524 aaKnown RBP19.74■□□□□ 0.75
CPSF1-205ENST00000531042 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-205ENST00000531042 MANSC4A6NHS7 340 aaPredicted RBP19.73■□□□□ 0.75
CPSF1-205ENST00000531042 GPR25O00155 361 aa19.73■□□□□ 0.75
CPSF1-205ENST00000531042 INHBEP58166 350 aa19.73■□□□□ 0.75
CPSF1-205ENST00000531042 TEPSINQ96N21 525 aa19.73■□□□□ 0.75
CPSF1-205ENST00000531042 TCP10L2B9ZVM9 353 aa19.72■□□□□ 0.75
CPSF1-205ENST00000531042 ALDH1A1P00352 501 aa19.72■□□□□ 0.75
CPSF1-205ENST00000531042 SLC5A1P13866 664 aa19.72■□□□□ 0.75
CPSF1-205ENST00000531042 RARSP54136 660 aaKnown RBP19.72■□□□□ 0.75
CPSF1-205ENST00000531042 MLLT1Q03111 559 aaPredicted RBP19.72■□□□□ 0.75
CPSF1-205ENST00000531042 ANKRD13AQ8IZ07 590 aa19.72■□□□□ 0.75
CPSF1-205ENST00000531042 LPIN2Q92539 896 aa19.72■□□□□ 0.75
CPSF1-205ENST00000531042 TEKT1Q969V4 418 aa19.72■□□□□ 0.75
CPSF1-205ENST00000531042 MRIQ9BWK5 157 aa19.72■□□□□ 0.75
CPSF1-205ENST00000531042 FBXO3Q9UK99 471 aa19.72■□□□□ 0.75
CPSF1-205ENST00000531042 MYH13Q9UKX3 1938 aa19.72■□□□□ 0.75
CPSF1-205ENST00000531042 OTOFQ9HC10 1997 aa19.72■□□□□ 0.75
CPSF1-205ENST00000531042 TNNI2P48788 182 aa19.71■□□□□ 0.75
CPSF1-205ENST00000531042 CDAN1Q8IWY9 1227 aa19.71■□□□□ 0.75
CPSF1-205ENST00000531042 R3HDMLQ9H3Y0 253 aa19.71■□□□□ 0.75
CPSF1-205ENST00000531042 SUGT1Q9Y2Z0 365 aa19.71■□□□□ 0.75
CPSF1-205ENST00000531042 CIAO1O76071 339 aa19.7■□□□□ 0.74
CPSF1-205ENST00000531042 GJA5P36382 358 aa19.7■□□□□ 0.74
CPSF1-205ENST00000531042 PKN2Q16513 984 aaKnown RBP19.7■□□□□ 0.74
CPSF1-205ENST00000531042 IFNL1Q8IU54 200 aa19.7■□□□□ 0.74
CPSF1-205ENST00000531042 ZDHHC15Q96MV8 337 aa19.7■□□□□ 0.74
CPSF1-205ENST00000531042 TMEM39BQ9GZU3 492 aa19.7■□□□□ 0.74
CPSF1-205ENST00000531042 SIL1Q9H173 461 aa19.7■□□□□ 0.74
CPSF1-205ENST00000531042 HDAC5Q9UQL6 1122 aa19.7■□□□□ 0.74
CPSF1-205ENST00000531042 LRRFIP2Q9Y608 721 aaKnown RBP19.7■□□□□ 0.74
CPSF1-205ENST00000531042 ARHGAP45Q92619 1136 aa19.69■□□□□ 0.74
CPSF1-205ENST00000531042 MAST3O60307 1309 aa19.69■□□□□ 0.74
CPSF1-205ENST00000531042 IGF2BP3O00425 579 aaKnown RBP eCLIP19.68■□□□□ 0.74
CPSF1-205ENST00000531042 FKTNO75072 461 aa19.68■□□□□ 0.74
CPSF1-205ENST00000531042 CACNB3P54284 484 aa19.68■□□□□ 0.74
CPSF1-205ENST00000531042 APOBEC3HQ6NTF7 200 aaKnown RBP19.68■□□□□ 0.74
CPSF1-205ENST00000531042 WDR66Q8TBY9 1149 aa19.68■□□□□ 0.74
CPSF1-205ENST00000531042 MEIS3Q99687 375 aa19.68■□□□□ 0.74
CPSF1-205ENST00000531042 CEP126Q9P2H0 1117 aa19.68■□□□□ 0.74
CPSF1-205ENST00000531042 TNRC18O15417 2968 aaPredicted RBP19.67■□□□□ 0.74
CPSF1-205ENST00000531042 ATP2B3Q16720 1220 aa19.67■□□□□ 0.74
CPSF1-205ENST00000531042 INTS3Q68E01 1043 aaKnown RBP19.67■□□□□ 0.74
CPSF1-205ENST00000531042 HHIPL2Q6UWX4 724 aa19.67■□□□□ 0.74
CPSF1-205ENST00000531042 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.67■□□□□ 0.74
CPSF1-205ENST00000531042 ELP3Q9H9T3 547 aa19.67■□□□□ 0.74
CPSF1-205ENST00000531042 HPS5Q9UPZ3 1129 aa19.67■□□□□ 0.74
CPSF1-205ENST00000531042 IL15P40933 162 aaPredicted RBP19.66■□□□□ 0.74
CPSF1-205ENST00000531042 FAM83AQ86UY5 434 aa19.66■□□□□ 0.74
CPSF1-205ENST00000531042 OPTNQ96CV9 577 aa19.66■□□□□ 0.74
CPSF1-205ENST00000531042 COPRSQ9NQ92 184 aa19.66■□□□□ 0.74
CPSF1-205ENST00000531042 TMOD2Q9NZR1 351 aa19.66■□□□□ 0.74
CPSF1-205ENST00000531042 PA2G4Q9UQ80 394 aaKnown RBP19.66■□□□□ 0.74
CPSF1-205ENST00000531042 TESPA1A2RU30 521 aaPredicted RBP19.65■□□□□ 0.74
CPSF1-205ENST00000531042 MAP3K9P80192 1104 aa19.65■□□□□ 0.74
CPSF1-205ENST00000531042 FKBP1CQ5VVH2 108 aa19.65■□□□□ 0.74
CPSF1-205ENST00000531042 OTUD7BQ6GQQ9 843 aa19.65■□□□□ 0.74
CPSF1-205ENST00000531042 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.65■□□□□ 0.746e-8■□□□□ 8.9
CPSF1-205ENST00000531042 SOX10P56693 466 aa19.64■□□□□ 0.73
CPSF1-205ENST00000531042 VGLL4Q14135 290 aa19.64■□□□□ 0.73
CPSF1-205ENST00000531042 PTPN18Q99952 460 aa19.64■□□□□ 0.73
CPSF1-205ENST00000531042 GNL3LQ9NVN8 582 aaKnown RBP19.64■□□□□ 0.73
CPSF1-205ENST00000531042 GNAI3P08754 354 aa19.63■□□□□ 0.73
CPSF1-205ENST00000531042 FBXO46Q6PJ61 603 aaPredicted RBP19.63■□□□□ 0.73
CPSF1-205ENST00000531042 CNKSR2Q8WXI2 1034 aa19.63■□□□□ 0.73
CPSF1-205ENST00000531042 MS4A4AQ96JQ5 239 aa19.63■□□□□ 0.73
CPSF1-205ENST00000531042 CSADQ9Y600 493 aa19.63■□□□□ 0.73
CPSF1-205ENST00000531042 PRDX5P30044 214 aa19.62■□□□□ 0.73
CPSF1-205ENST00000531042 PHKA1P46020 1223 aa19.62■□□□□ 0.73
CPSF1-205ENST00000531042 HOOK2Q96ED9 719 aa19.62■□□□□ 0.73
CPSF1-205ENST00000531042 DENND2AQ9ULE3 1009 aa19.62■□□□□ 0.73
CPSF1-205ENST00000531042 RPAP1Q9BWH6 1393 aaPredicted RBP19.61■□□□□ 0.73
CPSF1-205ENST00000531042 SALL1Q9NSC2 1324 aa19.61■□□□□ 0.73
CPSF1-205ENST00000531042 SEMA3EO15041 775 aa19.61■□□□□ 0.73
CPSF1-205ENST00000531042 ZBTB22O15209 634 aa19.61■□□□□ 0.73
CPSF1-205ENST00000531042 IPO8O15397 1037 aaKnown RBP19.61■□□□□ 0.73
CPSF1-205ENST00000531042 CRHR2Q13324 411 aa19.61■□□□□ 0.73
CPSF1-205ENST00000531042 MTX1Q13505 466 aa19.61■□□□□ 0.73
CPSF1-205ENST00000531042 DIXDC1Q155Q3 683 aa19.61■□□□□ 0.73
CPSF1-205ENST00000531042 DAGLAQ9Y4D2 1042 aa19.61■□□□□ 0.73
CPSF1-205ENST00000531042 SRGAP3O43295 1099 aa19.6■□□□□ 0.73
CPSF1-205ENST00000531042 BCAR3O75815 825 aa19.6■□□□□ 0.73
CPSF1-205ENST00000531042 LDHBP07195 334 aaKnown RBP19.6■□□□□ 0.73
CPSF1-205ENST00000531042 TRIM27P14373 513 aa19.6■□□□□ 0.73
CPSF1-205ENST00000531042 ADORA1P30542 326 aa19.6■□□□□ 0.73
CPSF1-205ENST00000531042 GTF2A2P52657 109 aa19.6■□□□□ 0.73
CPSF1-205ENST00000531042 SPDYE5A6NIY4 337 aa19.59■□□□□ 0.73
CPSF1-205ENST00000531042 TIMM10P62072 90 aa19.59■□□□□ 0.73
CPSF1-205ENST00000531042 DCAF15Q66K64 600 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms