RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 ZBTB48P10074 688 aaPredicted RBP26.11■■□□□ 1.77
SMPD1-204ENST00000530395 SLC5A1P13866 664 aa26.11■■□□□ 1.77
SMPD1-204ENST00000530395 RFX5P48382 616 aaPredicted RBP26.11■■□□□ 1.77
SMPD1-204ENST00000530395 TNNI2P48788 182 aa26.11■■□□□ 1.77
SMPD1-204ENST00000530395 BCAMP50895 628 aa26.11■■□□□ 1.77
SMPD1-204ENST00000530395 HDLBPQ00341 1268 aaKnown RBP26.11■■□□□ 1.77
SMPD1-204ENST00000530395 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.11■■□□□ 1.77
SMPD1-204ENST00000530395 OTOFQ9HC10 1997 aa26.11■■□□□ 1.77
SMPD1-204ENST00000530395 MANSC4A6NHS7 340 aaPredicted RBP26.1■■□□□ 1.77
SMPD1-204ENST00000530395 FGFR2P21802 821 aa26.1■■□□□ 1.77
SMPD1-204ENST00000530395 TEKT1Q969V4 418 aa26.1■■□□□ 1.77
SMPD1-204ENST00000530395 MAST3O60307 1309 aa26.1■■□□□ 1.77
SMPD1-204ENST00000530395 ALDH1A1P00352 501 aa26.09■■□□□ 1.77
SMPD1-204ENST00000530395 INHBEP58166 350 aa26.09■■□□□ 1.77
SMPD1-204ENST00000530395 NOM1Q5C9Z4 860 aaKnown RBP26.09■■□□□ 1.77
SMPD1-204ENST00000530395 ANKRD13AQ8IZ07 590 aa26.09■■□□□ 1.77
SMPD1-204ENST00000530395 LPIN2Q92539 896 aa26.09■■□□□ 1.77
SMPD1-204ENST00000530395 WNK4Q96J92 1243 aa26.09■■□□□ 1.77
SMPD1-204ENST00000530395 CLMNQ96JQ2 1002 aa26.09■■□□□ 1.77
SMPD1-204ENST00000530395 FBXO3Q9UK99 471 aa26.09■■□□□ 1.77
SMPD1-204ENST00000530395 RGS19P49795 217 aa26.08■■□□□ 1.77
SMPD1-204ENST00000530395 GRIK5Q16478 980 aa26.08■■□□□ 1.77
SMPD1-204ENST00000530395 ZNF296Q8WUU4 475 aaPredicted RBP26.08■■□□□ 1.77
SMPD1-204ENST00000530395 CFHR5Q9BXR6 569 aa26.08■■□□□ 1.77
SMPD1-204ENST00000530395 SUGT1Q9Y2Z0 365 aa26.08■■□□□ 1.77
SMPD1-204ENST00000530395 TCP10L2B9ZVM9 353 aa26.07■■□□□ 1.76
SMPD1-204ENST00000530395 USP2O75604 605 aaPredicted RBP26.07■■□□□ 1.76
SMPD1-204ENST00000530395 MLLT1Q03111 559 aaPredicted RBP26.07■■□□□ 1.76
SMPD1-204ENST00000530395 GPR25O00155 361 aa26.06■■□□□ 1.76
SMPD1-204ENST00000530395 CIAO1O76071 339 aa26.06■■□□□ 1.76
SMPD1-204ENST00000530395 RARSP54136 660 aaKnown RBP26.06■■□□□ 1.76
SMPD1-204ENST00000530395 ATG9AQ7Z3C6 839 aa26.06■■□□□ 1.76
SMPD1-204ENST00000530395 SIL1Q9H173 461 aa26.06■■□□□ 1.76
SMPD1-204ENST00000530395 TMOD2Q9NZR1 351 aa26.06■■□□□ 1.76
SMPD1-204ENST00000530395 LRRFIP2Q9Y608 721 aaKnown RBP26.06■■□□□ 1.76
SMPD1-204ENST00000530395 PKN2Q16513 984 aaKnown RBP26.05■■□□□ 1.76
SMPD1-204ENST00000530395 WDR66Q8TBY9 1149 aa26.05■■□□□ 1.76
SMPD1-204ENST00000530395 ZDHHC15Q96MV8 337 aa26.04■■□□□ 1.76
SMPD1-204ENST00000530395 TEPSINQ96N21 525 aa26.04■■□□□ 1.76
SMPD1-204ENST00000530395 MRIQ9BWK5 157 aa26.04■■□□□ 1.76
SMPD1-204ENST00000530395 TMEM39BQ9GZU3 492 aa26.04■■□□□ 1.76
SMPD1-204ENST00000530395 CEP126Q9P2H0 1117 aa26.04■■□□□ 1.76
SMPD1-204ENST00000530395 ATP2B3Q16720 1220 aa26.03■■□□□ 1.76
SMPD1-204ENST00000530395 IFNL1Q8IU54 200 aa26.03■■□□□ 1.76
SMPD1-204ENST00000530395 ARHGAP45Q92619 1136 aa26.03■■□□□ 1.76
SMPD1-204ENST00000530395 FKTNO75072 461 aa26.02■■□□□ 1.76
SMPD1-204ENST00000530395 IL15P40933 162 aaPredicted RBP26.02■■□□□ 1.76
SMPD1-204ENST00000530395 GNL3LQ9NVN8 582 aaKnown RBP26.02■■□□□ 1.76
SMPD1-204ENST00000530395 OTUD7BQ6GQQ9 843 aa26.01■■□□□ 1.75
SMPD1-204ENST00000530395 HHIPL2Q6UWX4 724 aa26.01■■□□□ 1.75
SMPD1-204ENST00000530395 MEIS3Q99687 375 aa26.01■■□□□ 1.75
SMPD1-204ENST00000530395 ELP3Q9H9T3 547 aa26.01■■□□□ 1.75
SMPD1-204ENST00000530395 FKBP1CQ5VVH2 108 aa26■■□□□ 1.75
SMPD1-204ENST00000530395 INTS3Q68E01 1043 aaKnown RBP26■■□□□ 1.75
SMPD1-204ENST00000530395 CDAN1Q8IWY9 1227 aa26■■□□□ 1.75
SMPD1-204ENST00000530395 HOOK2Q96ED9 719 aa26■■□□□ 1.75
SMPD1-204ENST00000530395 GNAI3P08754 354 aa25.99■■□□□ 1.75
SMPD1-204ENST00000530395 CACNB3P54284 484 aa25.99■■□□□ 1.75
SMPD1-204ENST00000530395 FAM83AQ86UY5 434 aa25.99■■□□□ 1.75
SMPD1-204ENST00000530395 OPTNQ96CV9 577 aa25.99■■□□□ 1.75
SMPD1-204ENST00000530395 COPRSQ9NQ92 184 aa25.99■■□□□ 1.75
SMPD1-204ENST00000530395 CSADQ9Y600 493 aa25.99■■□□□ 1.75
SMPD1-204ENST00000530395 IGF2BP3O00425 579 aaKnown RBP eCLIP25.98■■□□□ 1.75
SMPD1-204ENST00000530395 IPO8O15397 1037 aaKnown RBP25.98■■□□□ 1.75
SMPD1-204ENST00000530395 GJA5P36382 358 aa25.98■■□□□ 1.75
SMPD1-204ENST00000530395 APOBEC3HQ6NTF7 200 aaKnown RBP25.98■■□□□ 1.75
SMPD1-204ENST00000530395 R3HDMLQ9H3Y0 253 aa25.98■■□□□ 1.75
SMPD1-204ENST00000530395 HPS5Q9UPZ3 1129 aa25.98■■□□□ 1.75
SMPD1-204ENST00000530395 PA2G4Q9UQ80 394 aaKnown RBP25.98■■□□□ 1.75
SMPD1-204ENST00000530395 MAP3K9P80192 1104 aa25.97■■□□□ 1.75
SMPD1-204ENST00000530395 RPAP1Q9BWH6 1393 aaPredicted RBP25.96■■□□□ 1.75
SMPD1-204ENST00000530395 SEMA3EO15041 775 aa25.96■■□□□ 1.75
SMPD1-204ENST00000530395 VGLL4Q14135 290 aa25.96■■□□□ 1.75
SMPD1-204ENST00000530395 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.96■■□□□ 1.75
SMPD1-204ENST00000530395 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.96■■□□□ 1.75
SMPD1-204ENST00000530395 DENND2AQ9ULE3 1009 aa25.96■■□□□ 1.75
SMPD1-204ENST00000530395 TNRC18O15417 2968 aaPredicted RBP25.96■■□□□ 1.75
SMPD1-204ENST00000530395 TESPA1A2RU30 521 aaPredicted RBP25.95■■□□□ 1.74
SMPD1-204ENST00000530395 SOX10P56693 466 aa25.95■■□□□ 1.74
SMPD1-204ENST00000530395 FBXO46Q6PJ61 603 aaPredicted RBP25.95■■□□□ 1.74
SMPD1-204ENST00000530395 AK9Q5TCS8 1911 aa25.94■■□□□ 1.74
SMPD1-204ENST00000530395 SRGAP3O43295 1099 aa25.94■■□□□ 1.74
SMPD1-204ENST00000530395 LDHBP07195 334 aaKnown RBP25.94■■□□□ 1.74
SMPD1-204ENST00000530395 SALL1Q9NSC2 1324 aa25.93■■□□□ 1.74
SMPD1-204ENST00000530395 DCAF15Q66K64 600 aa25.93■■□□□ 1.74
SMPD1-204ENST00000530395 TRIM27P14373 513 aa25.92■■□□□ 1.74
SMPD1-204ENST00000530395 PRDX5P30044 214 aa25.92■■□□□ 1.74
SMPD1-204ENST00000530395 PHKA1P46020 1223 aa25.92■■□□□ 1.74
SMPD1-204ENST00000530395 GTF2A2P52657 109 aa25.92■■□□□ 1.74
SMPD1-204ENST00000530395 CRHR2Q13324 411 aa25.92■■□□□ 1.74
SMPD1-204ENST00000530395 DIXDC1Q155Q3 683 aa25.92■■□□□ 1.74
SMPD1-204ENST00000530395 ATF7IPQ6VMQ6 1270 aa25.92■■□□□ 1.74
SMPD1-204ENST00000530395 ZGPATQ8N5A5 531 aaKnown RBP25.92■■□□□ 1.74
SMPD1-204ENST00000530395 FRAT1Q92837 279 aaPredicted RBP25.92■■□□□ 1.74
SMPD1-204ENST00000530395 WRNIP1Q96S55 665 aa25.92■■□□□ 1.74
SMPD1-204ENST00000530395 DAGLAQ9Y4D2 1042 aa25.92■■□□□ 1.74
SMPD1-204ENST00000530395 MYH2Q9UKX2 1941 aa25.91■■□□□ 1.74
SMPD1-204ENST00000530395 MTX1Q13505 466 aa25.91■■□□□ 1.74
SMPD1-204ENST00000530395 CNKSR2Q8WXI2 1034 aa25.91■■□□□ 1.74
SMPD1-204ENST00000530395 OTUD5Q96G74 571 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms