RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 LMBR1Q8WVP7 490 aa17.47■□□□□ 0.39
PCDHA4-203ENST00000530339 NBPF4Q96M43 638 aa17.47■□□□□ 0.39
PCDHA4-203ENST00000530339 LUC7L2Q9Y383 392 aaKnown RBP17.47■□□□□ 0.39
PCDHA4-203ENST00000530339 TBX22Q9Y458 520 aa17.47■□□□□ 0.39
PCDHA4-203ENST00000530339 LEO1Q8WVC0 666 aaPredicted RBP17.46■□□□□ 0.39
PCDHA4-203ENST00000530339 ADGBQ8N7X0 1667 aa17.46■□□□□ 0.39
PCDHA4-203ENST00000530339 FAM76AQ8TAV0 307 aa17.46■□□□□ 0.39
PCDHA4-203ENST00000530339 CAPZA3Q96KX2 299 aa17.46■□□□□ 0.39
PCDHA4-203ENST00000530339 NLRP3Q96P20 1036 aa17.46■□□□□ 0.39
PCDHA4-203ENST00000530339 HDAC9Q9UKV0 1011 aa17.46■□□□□ 0.39
PCDHA4-203ENST00000530339 BCL2L12Q9HB09 334 aa17.46■□□□□ 0.39
PCDHA4-203ENST00000530339 KRT2P35908 639 aa17.46■□□□□ 0.38
PCDHA4-203ENST00000530339 UBXN1Q04323 297 aa17.46■□□□□ 0.38
PCDHA4-203ENST00000530339 KRBA2Q6ZNG9 492 aa17.46■□□□□ 0.38
PCDHA4-203ENST00000530339 CCDC121Q6ZUS5 278 aa17.46■□□□□ 0.38
PCDHA4-203ENST00000530339 EYA1Q99502 592 aa17.46■□□□□ 0.38
PCDHA4-203ENST00000530339 MAGEB6P1A0A0J9YX57 407 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 RNMTO43148 476 aaKnown RBP17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 FAM173BQ6P4H8 233 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 ZNF622Q969S3 477 aaKnown RBP eCLIP17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 ZRANB1Q9UGI0 708 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 ATP7AQ04656 1500 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 IL2RBP14784 551 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 HOXC9P31274 260 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 ZNF804AQ7Z570 1209 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 SLC27A2O14975 620 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 MMRN2Q9H8L6 949 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 ASIC1P78348 528 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 SYCP3Q8IZU3 236 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 ANKRD2Q9GZV1 360 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 PCDH11XQ9BZA7 1347 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 PCDH11YQ9BZA8 1340 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 KIAA0232Q92628 1395 aa17.45■□□□□ 0.38
PCDHA4-203ENST00000530339 CWF19L2Q2TBE0 894 aaKnown RBP17.44■□□□□ 0.38
PCDHA4-203ENST00000530339 FERMT1Q9BQL6 677 aa17.44■□□□□ 0.38
PCDHA4-203ENST00000530339 CARD6Q9BX69 1037 aa17.44■□□□□ 0.38
PCDHA4-203ENST00000530339 SAMD9Q5K651 1589 aa17.44■□□□□ 0.38
PCDHA4-203ENST00000530339 G2E3Q7L622 706 aa17.44■□□□□ 0.38
PCDHA4-203ENST00000530339 ANKS4BQ8N8V4 417 aa17.44■□□□□ 0.38
PCDHA4-203ENST00000530339 VAT1LQ9HCJ6 419 aa17.44■□□□□ 0.38
PCDHA4-203ENST00000530339 FANCCQ00597 558 aa17.44■□□□□ 0.38
PCDHA4-203ENST00000530339 CCDC174Q6PII3 467 aa17.44■□□□□ 0.38
PCDHA4-203ENST00000530339 CCDC129Q6ZRS4 1044 aa17.44■□□□□ 0.38
PCDHA4-203ENST00000530339 IL13P35225 146 aa17.43■□□□□ 0.38
PCDHA4-203ENST00000530339 IQUBQ8NA54 791 aa17.43■□□□□ 0.38
PCDHA4-203ENST00000530339 SETDB2Q96T68 719 aa17.43■□□□□ 0.38
PCDHA4-203ENST00000530339 GNA11P29992 359 aa17.43■□□□□ 0.38
PCDHA4-203ENST00000530339 MSL1Q68DK7 614 aa17.43■□□□□ 0.38
PCDHA4-203ENST00000530339 TMEM87BQ96K49 555 aa17.43■□□□□ 0.38
PCDHA4-203ENST00000530339 RASAL2Q9UJF2 1139 aa17.43■□□□□ 0.38
PCDHA4-203ENST00000530339 GAS2L3Q86XJ1 694 aa17.43■□□□□ 0.38
PCDHA4-203ENST00000530339 STX8Q9UNK0 236 aa17.43■□□□□ 0.38
PCDHA4-203ENST00000530339 CHL1O00533 1208 aa17.43■□□□□ 0.38
PCDHA4-203ENST00000530339 ZEB2O60315 1214 aa17.43■□□□□ 0.38
PCDHA4-203ENST00000530339 STMN4Q9H169 189 aaPredicted RBP17.43■□□□□ 0.38
PCDHA4-203ENST00000530339 A0A1B0GUL7 405 aa17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 CHMP4BP1P59074 171 aa17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 TFCP2Q12800 502 aa17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 CERS3Q8IU89 383 aa17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 TTF2Q9UNY4 1162 aaKnown RBP17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 CTNNA2P26232 953 aa17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 CCDC122Q5T0U0 273 aa17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 C19orf44Q9H6X5 657 aa17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 ARHGAP6O43182 974 aa17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 KRT13P13646 458 aa17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 ANO1Q5XXA6 986 aa17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 FERMT2Q96AC1 680 aa17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 ARHGEF5Q12774 1597 aa17.42■□□□□ 0.38
PCDHA4-203ENST00000530339 STAMBPO95630 424 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 PPP2R5BQ15173 497 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 IGSF22Q8N9C0 903 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 NAPGQ99747 312 aaPredicted RBP17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 SSH2Q76I76 1423 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 TRIM14Q14142 442 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 ARHGEF10O15013 1369 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 DISP1Q96F81 1524 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 CFAP58Q5T655 872 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 C6orf163Q5TEZ5 329 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 SPATA31E1Q6ZUB1 1445 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 MAP3K19Q56UN5 1328 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 IRX3P78415 501 aaPredicted RBP17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 RILPL1Q5EBL4 403 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 AFAP1L1Q8TED9 768 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 RRP36Q96EU6 259 aaKnown RBP17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 NAPAP54920 295 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 CHRNA2Q15822 529 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 PLBD2Q8NHP8 589 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 FBF1Q8TES7 1133 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 TM6SF1Q9BZW5 370 aa17.41■□□□□ 0.38
PCDHA4-203ENST00000530339 ABCA5Q8WWZ7 1642 aa17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 SBNO2Q9Y2G9 1366 aa17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 SLC39A6Q13433 755 aa17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 KRT79Q5XKE5 535 aa17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 SIRT1Q96EB6 747 aa17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 TSGA10Q9BZW7 698 aa17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 KIF4AO95239 1232 aa17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 CEP57Q86XR8 500 aa17.4■□□□□ 0.38
PCDHA4-203ENST00000530339 DNAJC21Q5F1R6 531 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms