RNA–Protein interactions for RNA: ENST00000530164.5

RPS3-214, Transcript of ribosomal protein S3, humanhuman

TSL 1 (best) BASIC

Gene RPS3, Length 1,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-214ENST00000530164 TBC1D16Q8TBP0 767 aa11.39□□□□□ -0.59
RPS3-214ENST00000530164 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
RPS3-214ENST00000530164 CDCA5Q96FF9 252 aa11.39□□□□□ -0.59
RPS3-214ENST00000530164 FAM89AQ96GI7 184 aa11.39□□□□□ -0.59
RPS3-214ENST00000530164 CHMP4AQ9BY43 222 aa11.39□□□□□ -0.59
RPS3-214ENST00000530164 ZC3H12CQ9C0D7 883 aaKnown RBP11.39□□□□□ -0.59
RPS3-214ENST00000530164 CENPFP49454 3210 aa11.39□□□□□ -0.59
RPS3-214ENST00000530164 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
RPS3-214ENST00000530164 NEK4P51957 841 aa11.38□□□□□ -0.59
RPS3-214ENST00000530164 RPS8P62241 208 aaKnown RBP11.38□□□□□ -0.59
RPS3-214ENST00000530164 FLIIQ13045 1269 aa11.38□□□□□ -0.59
RPS3-214ENST00000530164 MKRN4PQ13434 485 aaPredicted RBP11.38□□□□□ -0.59
RPS3-214ENST00000530164 HSP90AA2PQ14568 343 aaPredicted RBP11.38□□□□□ -0.59
RPS3-214ENST00000530164 RASAL3Q86YV0 1011 aa11.38□□□□□ -0.59
RPS3-214ENST00000530164 TMEM87AQ8NBN3 555 aa11.38□□□□□ -0.59
RPS3-214ENST00000530164 PLBD2Q8NHP8 589 aa11.38□□□□□ -0.59
RPS3-214ENST00000530164 CCDC39Q9UFE4 941 aa11.38□□□□□ -0.59
RPS3-214ENST00000530164 ASTN2O75129 1339 aaPredicted RBP11.37□□□□□ -0.59
RPS3-214ENST00000530164 AKAP11Q9UKA4 1901 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 LAMB2P55268 1798 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 NCLP19338 710 aaKnown RBP11.37□□□□□ -0.59
RPS3-214ENST00000530164 ZNF280AP59817 542 aaPredicted RBP11.37□□□□□ -0.59
RPS3-214ENST00000530164 SCARF1Q14162 830 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 ANGEL2Q5VTE6 544 aaKnown RBP11.37□□□□□ -0.59
RPS3-214ENST00000530164 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 AGBL3Q8NEM8 1001 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 SSH3Q8TE77 659 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 ISCA1Q9BUE6 129 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 PODXL2Q9NZ53 605 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 TMEM63CQ9P1W3 806 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 HDAC9Q9UKV0 1011 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 LRRC37AA6NMS7 1700 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 TAF1P21675 1872 aa11.37□□□□□ -0.59
RPS3-214ENST00000530164 BRCA2P51587 3418 aa11.36□□□□□ -0.59
RPS3-214ENST00000530164 G3V3G9 751 aa11.36□□□□□ -0.59
RPS3-214ENST00000530164 HOXB7P09629 217 aa11.36□□□□□ -0.59
RPS3-214ENST00000530164 DCAF8Q5TAQ9 597 aa11.36□□□□□ -0.59
RPS3-214ENST00000530164 SLC4A10Q6U841 1118 aa11.36□□□□□ -0.59
RPS3-214ENST00000530164 ZNF296Q8WUU4 475 aaPredicted RBP11.36□□□□□ -0.59
RPS3-214ENST00000530164 ZKSCAN5Q9Y2L8 839 aa11.36□□□□□ -0.59
RPS3-214ENST00000530164 F6X3S4 739 aa11.36□□□□□ -0.59
RPS3-214ENST00000530164 HSPA4P34932 840 aa11.36□□□□□ -0.59
RPS3-214ENST00000530164 POLA2Q14181 598 aa11.36□□□□□ -0.59
RPS3-214ENST00000530164 UVSSAQ2YD98 709 aa11.36□□□□□ -0.59
RPS3-214ENST00000530164 NOM1Q5C9Z4 860 aaKnown RBP11.36□□□□□ -0.59
RPS3-214ENST00000530164 FAM184AQ8NB25 1140 aa11.36□□□□□ -0.59
RPS3-214ENST00000530164 EXOC6BQ9Y2D4 811 aa11.36□□□□□ -0.59
RPS3-214ENST00000530164 PITPNM2Q9BZ72 1349 aa11.35□□□□□ -0.59
RPS3-214ENST00000530164 ATP5J2-PTCD1G3V325 749 aa11.35□□□□□ -0.59
RPS3-214ENST00000530164 APBB1O00213 710 aa11.35□□□□□ -0.59
RPS3-214ENST00000530164 IRS4O14654 1257 aaPredicted RBP11.35□□□□□ -0.59
RPS3-214ENST00000530164 TBC1D8O95759 1140 aa11.35□□□□□ -0.59
RPS3-214ENST00000530164 TRIM28Q13263 835 aaKnown RBP11.35□□□□□ -0.59
RPS3-214ENST00000530164 RSBN1LQ6PCB5 846 aaPredicted RBP11.35□□□□□ -0.59
RPS3-214ENST00000530164 KIAA1211Q6ZU35 1233 aa11.35□□□□□ -0.59
RPS3-214ENST00000530164 CHPF2Q9P2E5 772 aa11.35□□□□□ -0.59
RPS3-214ENST00000530164 ANKIB1Q9P2G1 1089 aa11.35□□□□□ -0.59
RPS3-214ENST00000530164 HTTP42858 3142 aa11.35□□□□□ -0.59
RPS3-214ENST00000530164 UFL1O94874 794 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 USP17L8P0C7I0 530 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 TM4SF4P48230 202 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 FKBP5Q13451 457 aaPredicted RBP11.34□□□□□ -0.59
RPS3-214ENST00000530164 TSPY26PQ9H489 355 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 MYOZ2Q9NPC6 264 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 GGA1Q9UJY5 639 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 ZNF609O15014 1411 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 RAD50Q92878 1312 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 PNMA6EA0A0J9YXQ4 647 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 LETM1O95202 739 aaPredicted RBP11.34□□□□□ -0.59
RPS3-214ENST00000530164 HSP90B1P14625 803 aaKnown RBP11.34□□□□□ -0.59
RPS3-214ENST00000530164 FBXO46Q6PJ61 603 aaPredicted RBP11.34□□□□□ -0.59
RPS3-214ENST00000530164 MAP7D2Q96T17 732 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 GMLQ99445 158 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 ANO2Q9NQ90 1003 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 RBM27Q9P2N5 1060 aaKnown RBP11.34□□□□□ -0.59
RPS3-214ENST00000530164 DBF4Q9UBU7 674 aaPredicted RBP11.34□□□□□ -0.59
RPS3-214ENST00000530164 PALD1Q9ULE6 856 aa11.34□□□□□ -0.59
RPS3-214ENST00000530164 RPAP1Q9BWH6 1393 aaPredicted RBP11.33□□□□□ -0.6
RPS3-214ENST00000530164 UBE2Q2LH0YL09 131 aa11.33□□□□□ -0.6
RPS3-214ENST00000530164 GPR25O00155 361 aa11.33□□□□□ -0.6
RPS3-214ENST00000530164 UBTFL1P0CB47 393 aaPredicted RBP11.33□□□□□ -0.6
RPS3-214ENST00000530164 HSP90AB4PQ58FF6 505 aa11.33□□□□□ -0.6
RPS3-214ENST00000530164 HDGFL1Q5TGJ6 251 aa11.33□□□□□ -0.6
RPS3-214ENST00000530164 MOB2Q70IA6 237 aa11.33□□□□□ -0.6
RPS3-214ENST00000530164 PODNQ7Z5L7 613 aa11.33□□□□□ -0.6
RPS3-214ENST00000530164 USP44Q9H0E7 712 aa11.33□□□□□ -0.6
RPS3-214ENST00000530164 PDCL3Q9H2J4 239 aa11.33□□□□□ -0.6
RPS3-214ENST00000530164 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.33□□□□□ -0.6
RPS3-214ENST00000530164 LRRFIP2Q9Y608 721 aaKnown RBP11.33□□□□□ -0.6
RPS3-214ENST00000530164 SYCE3A1L190 88 aa11.32□□□□□ -0.6
RPS3-214ENST00000530164 ZBTB38Q8NAP3 1195 aaPredicted RBP11.32□□□□□ -0.6
RPS3-214ENST00000530164 SEC31BQ9NQW1 1179 aa11.32□□□□□ -0.6
RPS3-214ENST00000530164 SCN9AQ15858 1988 aa11.32□□□□□ -0.6
RPS3-214ENST00000530164 USP17L3A6NCW0 530 aa11.32□□□□□ -0.6
RPS3-214ENST00000530164 USP17L4A6NCW7 530 aa11.32□□□□□ -0.6
RPS3-214ENST00000530164 TRIM6-TRIM34B2RNG4 842 aa11.32□□□□□ -0.6
RPS3-214ENST00000530164 SGSM2O43147 1006 aa11.32□□□□□ -0.6
RPS3-214ENST00000530164 PDIA4P13667 645 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms