RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 SALL4Q9UJQ4 1053 aa7.88□□□□□ -1.15
AMBRA1-209ENST00000529963 CAMSAP2Q08AD1 1489 aa7.88□□□□□ -1.15
AMBRA1-209ENST00000529963 NCOA2Q15596 1464 aa7.88□□□□□ -1.15
AMBRA1-209ENST00000529963 TNRQ92752 1358 aa7.88□□□□□ -1.15
AMBRA1-209ENST00000529963 PERM1Q5SV97 790 aa7.88□□□□□ -1.15
AMBRA1-209ENST00000529963 C8orf86Q6ZUL3 223 aa7.88□□□□□ -1.15
AMBRA1-209ENST00000529963 CCDC74AQ96AQ1 378 aa7.88□□□□□ -1.15
AMBRA1-209ENST00000529963 NPHS2Q9NP85 383 aa7.88□□□□□ -1.15
AMBRA1-209ENST00000529963 STARD13Q9Y3M8 1113 aa7.88□□□□□ -1.15
AMBRA1-209ENST00000529963 KDM5DQ9BY66 1539 aa7.87□□□□□ -1.15
AMBRA1-209ENST00000529963 WASHC2CQ9Y4E1 1318 aa7.87□□□□□ -1.15
AMBRA1-209ENST00000529963 WIPF1O43516 503 aa7.87□□□□□ -1.15
AMBRA1-209ENST00000529963 LDHBP07195 334 aaKnown RBP7.87□□□□□ -1.15
AMBRA1-209ENST00000529963 TSPY4P0CV99 314 aa7.87□□□□□ -1.15
AMBRA1-209ENST00000529963 TSPY10P0CW01 314 aa7.87□□□□□ -1.15
AMBRA1-209ENST00000529963 ALAS2P22557 587 aa7.87□□□□□ -1.15
AMBRA1-209ENST00000529963 AMPD1P23109 780 aa7.87□□□□□ -1.15
AMBRA1-209ENST00000529963 PMEPA1Q969W9 287 aa7.87□□□□□ -1.15
AMBRA1-209ENST00000529963 HHIPQ96QV1 700 aa7.87□□□□□ -1.15
AMBRA1-209ENST00000529963 BCL2L13Q9BXK5 485 aa7.87□□□□□ -1.15
AMBRA1-209ENST00000529963 PZPP20742 1482 aa7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 KIF4AO95239 1232 aa7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 GHRHP01286 108 aa7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 LORP23490 312 aaPredicted RBP7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 PEAR1Q5VY43 1037 aaPredicted RBP7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 PSAPL1Q6NUJ1 521 aa7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 ELMSAN1Q6PJG2 1045 aa7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 CHSY3Q70JA7 882 aa7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 FBXO33Q7Z6M2 555 aa7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 CEP120Q8N960 986 aa7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 BTBD6Q96KE9 485 aa7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 SPACA7Q96KW9 195 aa7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 SMG9Q9H0W8 520 aaKnown RBP7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 DNAJC25Q9H1X3 360 aa7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 RASSF4Q9H2L5 321 aa7.86□□□□□ -1.15
AMBRA1-209ENST00000529963 DNMT1P26358 1616 aaKnown RBP7.85□□□□□ -1.15
AMBRA1-209ENST00000529963 ALBP02768 609 aa7.85□□□□□ -1.15
AMBRA1-209ENST00000529963 HOXD8P13378 290 aaPredicted RBP7.85□□□□□ -1.15
AMBRA1-209ENST00000529963 ERCC3P19447 782 aa7.85□□□□□ -1.15
AMBRA1-209ENST00000529963 MAP3K10Q02779 954 aa7.85□□□□□ -1.15
AMBRA1-209ENST00000529963 GALNT12Q8IXK2 581 aa7.85□□□□□ -1.15
AMBRA1-209ENST00000529963 GIPC2Q8TF65 315 aa7.85□□□□□ -1.15
AMBRA1-209ENST00000529963 LPIN3Q9BQK8 851 aa7.85□□□□□ -1.15
AMBRA1-209ENST00000529963 ARHGEF5Q12774 1597 aa7.84□□□□□ -1.15
AMBRA1-209ENST00000529963 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.84□□□□□ -1.15
AMBRA1-209ENST00000529963 ADAMTSL4Q6UY14 1074 aa7.84□□□□□ -1.15
AMBRA1-209ENST00000529963 NPM2Q86SE8 214 aaKnown RBP7.84□□□□□ -1.15
AMBRA1-209ENST00000529963 NEDD1Q8NHV4 660 aa7.84□□□□□ -1.15
AMBRA1-209ENST00000529963 ZNF428Q96B54 188 aa7.84□□□□□ -1.15
AMBRA1-209ENST00000529963 PLD4Q96BZ4 506 aa7.84□□□□□ -1.15
AMBRA1-209ENST00000529963 FAM161BQ96MY7 647 aa7.84□□□□□ -1.15
AMBRA1-209ENST00000529963 OSMRQ99650 979 aa7.84□□□□□ -1.15
AMBRA1-209ENST00000529963 ZKSCAN3Q9BRR0 538 aa7.84□□□□□ -1.15
AMBRA1-209ENST00000529963 NLRP1Q9C000 1473 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 A0A1W2PP55 124 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 M0R082 166 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 GADD45BO75293 160 aaPredicted RBP7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 EDN3P14138 238 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 ATP2B2Q01814 1243 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 PCSK7Q16549 785 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 CEP135Q66GS9 1140 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 ANKLE2Q86XL3 938 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 THEMISQ8N1K5 641 aaPredicted RBP7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 MICALL1Q8N3F8 863 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 ZNF417Q8TAU3 575 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 ZNF587Q96SQ5 575 aaPredicted RBP7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 DUSP9Q99956 384 aaKnown RBP7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 RRAGCQ9HB90 399 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 JPH1Q9HDC5 661 aaPredicted RBP7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 DZANK1Q9NVP4 752 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 RGS17Q9UGC6 210 aaPredicted RBP7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 VPS8Q8N3P4 1428 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 MIA2Q96PC5 1412 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 LRRC9Q6ZRR7 1453 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 GDF6Q6KF10 455 aaPredicted RBP7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 ZSCAN1Q8NBB4 408 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 RBSNQ9H1K0 784 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 TRIM33Q9UPN9 1127 aa7.83□□□□□ -1.16
AMBRA1-209ENST00000529963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 SHANK2Q9UPX8 1470 aa7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 METTL12A8MUP2 240 aa7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 NFKBIEO00221 500 aa7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 RGS9O75916 674 aaPredicted RBP7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 ARHGEF15O94989 841 aa7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 POLR1AO95602 1720 aaPredicted RBP7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 COL19A1Q14993 1142 aa7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 C20orf204Q6ZNR8 217 aa7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 PBX4Q9BYU1 374 aa7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 LACRTQ9GZZ8 138 aa7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 NLRP2Q9NX02 1062 aa7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 UGGT1Q9NYU2 1555 aa7.82□□□□□ -1.16
AMBRA1-209ENST00000529963 NEURL4Q96JN8 1562 aa7.81□□□□□ -1.16
AMBRA1-209ENST00000529963 SNRPNP63162 240 aaKnown RBP7.81□□□□□ -1.16
AMBRA1-209ENST00000529963 ALG1LQ6GMV1 187 aa7.81□□□□□ -1.16
AMBRA1-209ENST00000529963 POP1Q99575 1024 aaKnown RBP7.81□□□□□ -1.16
AMBRA1-209ENST00000529963 EHD4Q9H223 541 aa7.81□□□□□ -1.16
AMBRA1-209ENST00000529963 PARP2Q9UGN5 583 aa7.81□□□□□ -1.16
AMBRA1-209ENST00000529963 MAST1Q9Y2H9 1570 aa7.8□□□□□ -1.16
AMBRA1-209ENST00000529963 NPHP4O75161 1426 aaPredicted RBP7.8□□□□□ -1.16
AMBRA1-209ENST00000529963 MAP3K1Q13233 1512 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms