RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 RNF208Q9H0X6 261 aa14.94□□□□□ -0.02
AMBRA1-207ENST00000529553 RIPOR2Q9Y4F9 1068 aa14.94□□□□□ -0.02
AMBRA1-207ENST00000529553 AOX1Q06278 1338 aa14.93□□□□□ -0.02
AMBRA1-207ENST00000529553 PI4KAP2A4QPH2 592 aa14.93□□□□□ -0.02
AMBRA1-207ENST00000529553 SOX1O00570 391 aaPredicted RBP14.93□□□□□ -0.02
AMBRA1-207ENST00000529553 PSMC4P43686 418 aa14.93□□□□□ -0.02
AMBRA1-207ENST00000529553 PI4KAP1Q8N8J0 262 aa14.93□□□□□ -0.02
AMBRA1-207ENST00000529553 EVI5O60447 810 aa14.92□□□□□ -0.02
AMBRA1-207ENST00000529553 SGPL1O95470 568 aa14.92□□□□□ -0.02
AMBRA1-207ENST00000529553 OSBPP22059 807 aa14.92□□□□□ -0.02
AMBRA1-207ENST00000529553 BMP8BP34820 402 aa14.92□□□□□ -0.02
AMBRA1-207ENST00000529553 LRCH3Q96II8 777 aa14.92□□□□□ -0.02
AMBRA1-207ENST00000529553 TDRD3Q9H7E2 651 aaKnown RBP14.92□□□□□ -0.02
AMBRA1-207ENST00000529553 IFT57Q9NWB7 429 aa14.92□□□□□ -0.02
AMBRA1-207ENST00000529553 FAM205AQ6ZU69 1335 aa14.92□□□□□ -0.02
AMBRA1-207ENST00000529553 NEURL1BA8MQ27 555 aa14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 ELL2O00472 640 aaPredicted RBP14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 FARP2O94887 1054 aaPredicted RBP14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 FMNL1O95466 1100 aaPredicted RBP14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 GNAI1P63096 354 aa14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 CALD1Q05682 793 aaKnown RBP14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 PPIL2Q13356 520 aa14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 RALBP1Q15311 655 aa14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 UBE3BQ7Z3V4 1068 aa14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 CCDC146Q8IYE0 955 aa14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 DZIP1LQ8IYY4 767 aaKnown RBP14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 U2AF1L4Q8WU68 220 aaKnown RBP14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 HOOK2Q96ED9 719 aa14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 STXBP5LQ9Y2K9 1186 aa14.91□□□□□ -0.02
AMBRA1-207ENST00000529553 ANKRD18BA2A2Z9 1011 aa14.9□□□□□ -0.02
AMBRA1-207ENST00000529553 IRF6O14896 467 aa14.9□□□□□ -0.02
AMBRA1-207ENST00000529553 CTGFP29279 349 aa14.9□□□□□ -0.02
AMBRA1-207ENST00000529553 PPATQ06203 517 aa14.9□□□□□ -0.02
AMBRA1-207ENST00000529553 ANKRD23Q86SG2 305 aa14.9□□□□□ -0.02
AMBRA1-207ENST00000529553 SLAIN1Q8ND83 568 aa14.9□□□□□ -0.02
AMBRA1-207ENST00000529553 TMEM39BQ9GZU3 492 aa14.9□□□□□ -0.02
AMBRA1-207ENST00000529553 BIN2Q9UBW5 565 aaPredicted RBP14.9□□□□□ -0.02
AMBRA1-207ENST00000529553 STAP2Q9UGK3 403 aa14.9□□□□□ -0.02
AMBRA1-207ENST00000529553 SNCAIPQ9Y6H5 919 aa14.9□□□□□ -0.02
AMBRA1-207ENST00000529553 TCP10L2B9ZVM9 353 aa14.89□□□□□ -0.03
AMBRA1-207ENST00000529553 SNAP23O00161 211 aa14.89□□□□□ -0.03
AMBRA1-207ENST00000529553 TAF5LO75529 589 aa14.89□□□□□ -0.03
AMBRA1-207ENST00000529553 CWF19L2Q2TBE0 894 aaKnown RBP14.89□□□□□ -0.03
AMBRA1-207ENST00000529553 CDAN1Q8IWY9 1227 aa14.89□□□□□ -0.03
AMBRA1-207ENST00000529553 TTF2Q9UNY4 1162 aaKnown RBP14.89□□□□□ -0.03
AMBRA1-207ENST00000529553 MYPNQ86TC9 1320 aa14.89□□□□□ -0.03
AMBRA1-207ENST00000529553 LAMA3Q16787 3333 aa14.88□□□□□ -0.03
AMBRA1-207ENST00000529553 CASP7P55210 303 aa14.88□□□□□ -0.03
AMBRA1-207ENST00000529553 GCKRQ14397 625 aa14.88□□□□□ -0.03
AMBRA1-207ENST00000529553 MFSD14BQ5SR56 506 aa14.88□□□□□ -0.03
AMBRA1-207ENST00000529553 DEFB123Q8N688 67 aa14.88□□□□□ -0.03
AMBRA1-207ENST00000529553 C8orf58Q8NAV2 365 aa14.88□□□□□ -0.03
AMBRA1-207ENST00000529553 TDRD7Q8NHU6 1098 aaKnown RBP14.88□□□□□ -0.03
AMBRA1-207ENST00000529553 CPA4Q9UI42 421 aa14.88□□□□□ -0.03
AMBRA1-207ENST00000529553 ECM29Q5VYK3 1845 aa14.87□□□□□ -0.03
AMBRA1-207ENST00000529553 HDLBPQ00341 1268 aaKnown RBP14.87□□□□□ -0.03
AMBRA1-207ENST00000529553 LRIT3Q3SXY7 679 aa14.87□□□□□ -0.03
AMBRA1-207ENST00000529553 FKBP1CQ5VVH2 108 aa14.87□□□□□ -0.03
AMBRA1-207ENST00000529553 ZKSCAN4Q969J2 545 aaPredicted RBP14.87□□□□□ -0.03
AMBRA1-207ENST00000529553 WRNIP1Q96S55 665 aa14.87□□□□□ -0.03
AMBRA1-207ENST00000529553 GDF15Q99988 308 aa14.87□□□□□ -0.03
AMBRA1-207ENST00000529553 MRIQ9BWK5 157 aa14.87□□□□□ -0.03
AMBRA1-207ENST00000529553 PDHXO00330 501 aa14.86□□□□□ -0.03
AMBRA1-207ENST00000529553 TFRCP02786 760 aaKnown RBP14.86□□□□□ -0.03
AMBRA1-207ENST00000529553 CRKP46108 304 aa14.86□□□□□ -0.03
AMBRA1-207ENST00000529553 FCGRTP55899 365 aa14.86□□□□□ -0.03
AMBRA1-207ENST00000529553 IFIT5Q13325 482 aaKnown RBP14.86□□□□□ -0.03
AMBRA1-207ENST00000529553 FAM83AQ86UY5 434 aa14.86□□□□□ -0.03
AMBRA1-207ENST00000529553 PXYLP1Q8TE99 480 aa14.86□□□□□ -0.03
AMBRA1-207ENST00000529553 UNC93B1Q9H1C4 597 aa14.86□□□□□ -0.03
AMBRA1-207ENST00000529553 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
AMBRA1-207ENST00000529553 MTMR10Q9NXD2 777 aa14.86□□□□□ -0.03
AMBRA1-207ENST00000529553 ADGRA2Q96PE1 1338 aa14.86□□□□□ -0.03
AMBRA1-207ENST00000529553 PRKCZQ05513 592 aa14.85□□□□□ -0.03
AMBRA1-207ENST00000529553 WDR43Q15061 677 aaKnown RBP eCLIP14.85□□□□□ -0.03
AMBRA1-207ENST00000529553 DCAF15Q66K64 600 aa14.85□□□□□ -0.03
AMBRA1-207ENST00000529553 COL25A1Q9BXS0 654 aaPredicted RBP14.85□□□□□ -0.03
AMBRA1-207ENST00000529553 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
AMBRA1-207ENST00000529553 KCNH4Q9UQ05 1017 aa14.85□□□□□ -0.03
AMBRA1-207ENST00000529553 JAG2Q9Y219 1238 aa14.85□□□□□ -0.03
AMBRA1-207ENST00000529553 BCRP11274 1271 aa14.84□□□□□ -0.03
AMBRA1-207ENST00000529553 HIBADHP31937 336 aaKnown RBP14.84□□□□□ -0.03
AMBRA1-207ENST00000529553 CRISPLD2Q9H0B8 497 aa14.84□□□□□ -0.03
AMBRA1-207ENST00000529553 ADAMTS8Q9UP79 889 aa14.84□□□□□ -0.03
AMBRA1-207ENST00000529553 ADCY3O60266 1144 aa14.83□□□□□ -0.04
AMBRA1-207ENST00000529553 IRF5Q13568 498 aa14.83□□□□□ -0.04
AMBRA1-207ENST00000529553 UBE4AQ14139 1066 aa14.83□□□□□ -0.04
AMBRA1-207ENST00000529553 NECAB2Q7Z6G3 386 aa14.83□□□□□ -0.04
AMBRA1-207ENST00000529553 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.83□□□□□ -0.04
AMBRA1-207ENST00000529553 PARK7Q99497 189 aaKnown RBP14.83□□□□□ -0.04
AMBRA1-207ENST00000529553 ZNF341Q9BYN7 854 aa14.83□□□□□ -0.04
AMBRA1-207ENST00000529553 PAK6Q9NQU5 681 aaPredicted RBP14.83□□□□□ -0.04
AMBRA1-207ENST00000529553 OTOFQ9HC10 1997 aa14.83□□□□□ -0.04
AMBRA1-207ENST00000529553 CXCL11O14625 94 aa14.82□□□□□ -0.04
AMBRA1-207ENST00000529553 ECM2O94769 699 aaPredicted RBP14.82□□□□□ -0.04
AMBRA1-207ENST00000529553 FOXO4P98177 505 aa14.82□□□□□ -0.04
AMBRA1-207ENST00000529553 MOGSQ13724 837 aa14.82□□□□□ -0.04
AMBRA1-207ENST00000529553 LDHAL6AQ6ZMR3 332 aa14.82□□□□□ -0.04
AMBRA1-207ENST00000529553 ANKLE1Q8NAG6 615 aa14.82□□□□□ -0.04
AMBRA1-207ENST00000529553 LINS1Q8NG48 757 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms