RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 MYH2Q9UKX2 1941 aa16.25■□□□□ 0.19
SSH3-206ENST00000529224 PRMT6Q96LA8 375 aaPredicted RBP16.24■□□□□ 0.19
SSH3-206ENST00000529224 RNF186Q9NXI6 227 aa16.24■□□□□ 0.19
SSH3-206ENST00000529224 SAGE1Q9NXZ1 904 aa16.24■□□□□ 0.19
SSH3-206ENST00000529224 SUGT1Q9Y2Z0 365 aa16.24■□□□□ 0.19
SSH3-206ENST00000529224 PPP2R3BQ9Y5P8 575 aa16.24■□□□□ 0.19
SSH3-206ENST00000529224 CLRN2A0PK11 232 aa16.23■□□□□ 0.19
SSH3-206ENST00000529224 TRPA1O75762 1119 aa16.23■□□□□ 0.19
SSH3-206ENST00000529224 HDLBPQ00341 1268 aaKnown RBP16.23■□□□□ 0.19
SSH3-206ENST00000529224 MLLT1Q03111 559 aaPredicted RBP16.23■□□□□ 0.19
SSH3-206ENST00000529224 DGKZQ13574 1117 aa16.23■□□□□ 0.19
SSH3-206ENST00000529224 TTLL12Q14166 644 aaPredicted RBP16.23■□□□□ 0.19
SSH3-206ENST00000529224 DEFB129Q9H1M3 183 aa16.23■□□□□ 0.19
SSH3-206ENST00000529224 GNL3LQ9NVN8 582 aaKnown RBP16.23■□□□□ 0.19
SSH3-206ENST00000529224 MAST3O60307 1309 aa16.22■□□□□ 0.19
SSH3-206ENST00000529224 AOX1Q06278 1338 aa16.22■□□□□ 0.19
SSH3-206ENST00000529224 CRKP46108 304 aa16.22■□□□□ 0.19
SSH3-206ENST00000529224 ITPRIPQ8IWB1 547 aa16.22■□□□□ 0.19
SSH3-206ENST00000529224 WDR66Q8TBY9 1149 aa16.22■□□□□ 0.19
SSH3-206ENST00000529224 VEZTQ9HBM0 779 aa16.22■□□□□ 0.19
SSH3-206ENST00000529224 TNFAIP1Q13829 316 aa16.21■□□□□ 0.19
SSH3-206ENST00000529224 ARMC9Q7Z3E5 817 aa16.21■□□□□ 0.19
SSH3-206ENST00000529224 TEKT1Q969V4 418 aa16.21■□□□□ 0.19
SSH3-206ENST00000529224 AKAP2Q9Y2D5 859 aa16.21■□□□□ 0.19
SSH3-206ENST00000529224 SSC5DA1L4H1 1573 aa16.21■□□□□ 0.18
SSH3-206ENST00000529224 PNMA6EA0A0J9YXQ4 647 aa16.2■□□□□ 0.18
SSH3-206ENST00000529224 SEMA3EO15041 775 aa16.2■□□□□ 0.18
SSH3-206ENST00000529224 RLBP1P12271 317 aa16.2■□□□□ 0.18
SSH3-206ENST00000529224 PRKG1Q13976 671 aa16.2■□□□□ 0.18
SSH3-206ENST00000529224 GRIK5Q16478 980 aa16.2■□□□□ 0.18
SSH3-206ENST00000529224 SPDYE2Q495Y8 402 aa16.2■□□□□ 0.18
SSH3-206ENST00000529224 MRIQ9BWK5 157 aa16.2■□□□□ 0.18
SSH3-206ENST00000529224 ZNF70Q9UC06 446 aaPredicted RBP16.2■□□□□ 0.18
SSH3-206ENST00000529224 FZD1Q9UP38 647 aa16.2■□□□□ 0.18
SSH3-206ENST00000529224 ZBTB22O15209 634 aa16.19■□□□□ 0.18
SSH3-206ENST00000529224 MS4A1P11836 297 aa16.19■□□□□ 0.18
SSH3-206ENST00000529224 PHKA1P46020 1223 aa16.19■□□□□ 0.18
SSH3-206ENST00000529224 RGS19P49795 217 aa16.19■□□□□ 0.18
SSH3-206ENST00000529224 TFCP2Q12800 502 aa16.19■□□□□ 0.18
SSH3-206ENST00000529224 G3BP1Q13283 466 aaKnown RBP eCLIP16.19■□□□□ 0.18
SSH3-206ENST00000529224 SUPT20HL1Q3ZLR7 823 aa16.19■□□□□ 0.18
SSH3-206ENST00000529224 TDRD3Q9H7E2 651 aaKnown RBP16.19■□□□□ 0.18
SSH3-206ENST00000529224 DENND2AQ9ULE3 1009 aa16.19■□□□□ 0.18
SSH3-206ENST00000529224 A0A1B0GUL7 405 aa16.18■□□□□ 0.18
SSH3-206ENST00000529224 ZBTB7BO15156 539 aaPredicted RBP16.18■□□□□ 0.18
SSH3-206ENST00000529224 PPP1R12BO60237 982 aaPredicted RBP16.18■□□□□ 0.18
SSH3-206ENST00000529224 ADORA1P30542 326 aa16.18■□□□□ 0.18
SSH3-206ENST00000529224 TIMM10P62072 90 aa16.18■□□□□ 0.18
SSH3-206ENST00000529224 RASA3Q14644 834 aa16.18■□□□□ 0.18
SSH3-206ENST00000529224 REM2Q8IYK8 340 aaPredicted RBP16.18■□□□□ 0.18
SSH3-206ENST00000529224 ZDHHC15Q96MV8 337 aa16.18■□□□□ 0.18
SSH3-206ENST00000529224 ANGEL1Q9UNK9 670 aaKnown RBP16.18■□□□□ 0.18
SSH3-206ENST00000529224 OTOFQ9HC10 1997 aa16.18■□□□□ 0.18
SSH3-206ENST00000529224 TNNI2P48788 182 aa16.17■□□□□ 0.18
SSH3-206ENST00000529224 ATP8B2P98198 1209 aa16.17■□□□□ 0.18
SSH3-206ENST00000529224 MKRN3Q13064 507 aaKnown RBP16.17■□□□□ 0.18
SSH3-206ENST00000529224 POLA2Q14181 598 aa16.17■□□□□ 0.18
SSH3-206ENST00000529224 MVPQ14764 893 aaKnown RBP16.17■□□□□ 0.18
SSH3-206ENST00000529224 LDLRAD1Q5T700 205 aa16.17■□□□□ 0.18
SSH3-206ENST00000529224 CCDC102BQ68D86 513 aa16.17■□□□□ 0.18
SSH3-206ENST00000529224 HHIPL2Q6UWX4 724 aa16.17■□□□□ 0.18
SSH3-206ENST00000529224 SSH3Q8TE77 659 aa16.17■□□□□ 0.18
SSH3-206ENST00000529224 LAMB1P07942 1786 aa16.17■□□□□ 0.18
SSH3-206ENST00000529224 SALL1Q9NSC2 1324 aa16.17■□□□□ 0.18
SSH3-206ENST00000529224 LDHBP07195 334 aaKnown RBP16.16■□□□□ 0.18
SSH3-206ENST00000529224 MAP3K11Q16584 847 aa16.16■□□□□ 0.18
SSH3-206ENST00000529224 ZGPATQ8N5A5 531 aaKnown RBP16.16■□□□□ 0.18
SSH3-206ENST00000529224 PANK1Q8TE04 598 aa16.16■□□□□ 0.18
SSH3-206ENST00000529224 XAGE2Q96GT9 111 aa16.16■□□□□ 0.18
SSH3-206ENST00000529224 C1orf115Q9H7X2 142 aa16.16■□□□□ 0.18
SSH3-206ENST00000529224 TMOD2Q9NZR1 351 aa16.16■□□□□ 0.18
SSH3-206ENST00000529224 TCP10L2B9ZVM9 353 aa16.15■□□□□ 0.18
SSH3-206ENST00000529224 NBPF12Q5TAG4 269 aaPredicted RBP16.15■□□□□ 0.18
SSH3-206ENST00000529224 NEUROD6Q96NK8 337 aa16.15■□□□□ 0.18
SSH3-206ENST00000529224 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
SSH3-206ENST00000529224 PDS5AQ29RF7 1337 aaKnown RBP16.15■□□□□ 0.18
SSH3-206ENST00000529224 UNCXA6NJT0 531 aa16.14■□□□□ 0.17
SSH3-206ENST00000529224 TBC1D8O95759 1140 aa16.14■□□□□ 0.17
SSH3-206ENST00000529224 PRDX5P30044 214 aa16.14■□□□□ 0.17
SSH3-206ENST00000529224 IREB2P48200 963 aaKnown RBP16.14■□□□□ 0.17
SSH3-206ENST00000529224 TM4SF4P48230 202 aa16.14■□□□□ 0.17
SSH3-206ENST00000529224 OS9Q13438 667 aaPredicted RBP16.14■□□□□ 0.17
SSH3-206ENST00000529224 RASGRF1Q13972 1273 aa16.14■□□□□ 0.17
SSH3-206ENST00000529224 GORABQ5T7V8 394 aa16.14■□□□□ 0.17
SSH3-206ENST00000529224 FKBP1CQ5VVH2 108 aa16.14■□□□□ 0.17
SSH3-206ENST00000529224 APOBEC3HQ6NTF7 200 aaKnown RBP16.14■□□□□ 0.17
SSH3-206ENST00000529224 CLMNQ96JQ2 1002 aa16.14■□□□□ 0.17
SSH3-206ENST00000529224 MYO5AQ9Y4I1 1855 aaKnown RBP16.14■□□□□ 0.17
SSH3-206ENST00000529224 SPRYD7Q5W111 196 aa16.13■□□□□ 0.17
SSH3-206ENST00000529224 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.13■□□□□ 0.17
SSH3-206ENST00000529224 SURF6O75683 361 aaKnown RBP16.12■□□□□ 0.17
SSH3-206ENST00000529224 SPTY2D1Q68D10 685 aaPredicted RBP16.12■□□□□ 0.17
SSH3-206ENST00000529224 FAM83AQ86UY5 434 aa16.12■□□□□ 0.17
SSH3-206ENST00000529224 CDAN1Q8IWY9 1227 aa16.12■□□□□ 0.17
SSH3-206ENST00000529224 SLC10A4Q96EP9 437 aa16.12■□□□□ 0.17
SSH3-206ENST00000529224 TEPSINQ96N21 525 aa16.12■□□□□ 0.17
SSH3-206ENST00000529224 TMEM39BQ9GZU3 492 aa16.12■□□□□ 0.17
SSH3-206ENST00000529224 GPR108Q9NPR9 543 aa16.12■□□□□ 0.17
SSH3-206ENST00000529224 NOP58Q9Y2X3 529 aaKnown RBP16.12■□□□□ 0.17
SSH3-206ENST00000529224 DAGLAQ9Y4D2 1042 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms