RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 HYIQ5T013 277 aa8.82□□□□□ -1
FDFT1-213ENST00000528729 KANK3Q6NY19 840 aa8.82□□□□□ -1
FDFT1-213ENST00000528729 CC2D1AQ6P1N0 951 aaPredicted RBP8.82□□□□□ -1
FDFT1-213ENST00000528729 NXPE4Q6UWF7 544 aa8.82□□□□□ -1
FDFT1-213ENST00000528729 SPATC1Q76KD6 591 aa8.82□□□□□ -1
FDFT1-213ENST00000528729 PPHLN1Q8NEY8 458 aaKnown RBP8.82□□□□□ -1
FDFT1-213ENST00000528729 ST13P5Q8NFI4 369 aaPredicted RBP8.82□□□□□ -1
FDFT1-213ENST00000528729 OR6P1Q8NGX9 317 aa8.82□□□□□ -1
FDFT1-213ENST00000528729 RHOVQ96L33 236 aa8.82□□□□□ -1
FDFT1-213ENST00000528729 SMAD5Q99717 465 aaKnown RBP8.82□□□□□ -1
FDFT1-213ENST00000528729 SARGQ9BW04 601 aa8.82□□□□□ -1
FDFT1-213ENST00000528729 BCO2Q9BYV7 579 aa8.82□□□□□ -1
FDFT1-213ENST00000528729 GGNBP2Q9H3C7 697 aa8.82□□□□□ -1
FDFT1-213ENST00000528729 ATG3Q9NT62 314 aa8.82□□□□□ -1
FDFT1-213ENST00000528729 UBP1Q9NZI7 540 aa8.82□□□□□ -1
FDFT1-213ENST00000528729 PUF60Q9UHX1 559 aaKnown RBP8.82□□□□□ -1
FDFT1-213ENST00000528729 RABGAP1Q9Y3P9 1069 aa8.82□□□□□ -1
FDFT1-213ENST00000528729 PBRM1Q86U86 1689 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 PRPF3O43395 683 aaKnown RBP8.81□□□□□ -1
FDFT1-213ENST00000528729 GALR2O43603 387 aaPredicted RBP8.81□□□□□ -1
FDFT1-213ENST00000528729 EYA4O95677 639 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 GARTP22102 1010 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 PSMA6P60900 246 aaKnown RBP8.81□□□□□ -1
FDFT1-213ENST00000528729 PABPC4Q13310 644 aaKnown RBP eCLIP8.81□□□□□ -1
FDFT1-213ENST00000528729 MTMR1Q13613 665 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 SLC4A8Q2Y0W8 1093 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 PRPF40BQ6NWY9 871 aaKnown RBP8.81□□□□□ -1
FDFT1-213ENST00000528729 KRT77Q7Z794 578 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 ZBTB46Q86UZ6 589 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 SLITRK4Q8IW52 837 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 NKD1Q969G9 470 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 TRMT2BQ96GJ1 504 aaKnown RBP8.81□□□□□ -1
FDFT1-213ENST00000528729 SLC4A9Q96Q91 983 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 STRBPQ96SI9 672 aaKnown RBP8.81□□□□□ -1
FDFT1-213ENST00000528729 NUDT12Q9BQG2 462 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 PRDM11Q9NQV5 511 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 CLIC5Q9NZA1 410 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 ZNF180Q9UJW8 692 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 PPT2Q9UMR5 302 aa8.81□□□□□ -1
FDFT1-213ENST00000528729 MAGEB6P1A0A0J9YX57 407 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 PSDA5PKW4 1024 aaPredicted RBP8.8□□□□□ -1
FDFT1-213ENST00000528729 F6X3S4 739 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 GJB6O95452 261 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 GSTT1P30711 240 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 HALP42357 657 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 CASP7P55210 303 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 SETDB1Q15047 1291 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 CCDC85BQ15834 202 aaPredicted RBP8.8□□□□□ -1
FDFT1-213ENST00000528729 C11orf91Q3C1V1 193 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 ASTLQ6HA08 431 aaPredicted RBP8.8□□□□□ -1
FDFT1-213ENST00000528729 CXorf57Q6NSI4 855 aaKnown RBP8.8□□□□□ -1
FDFT1-213ENST00000528729 ZNF354CQ86Y25 554 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 SLC9A9Q8IVB4 645 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 ATXN2LQ8WWM7 1075 aaKnown RBP8.8□□□□□ -1
FDFT1-213ENST00000528729 MTMR8Q96EF0 704 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 SLC10A4Q96EP9 437 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 AKAP2Q9Y2D5 859 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 NUB1Q9Y5A7 615 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 PHLDB1Q86UU1 1377 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 PTPRGP23470 1445 aa8.8□□□□□ -1
FDFT1-213ENST00000528729 ANO9A1A5B4 782 aa8.79□□□□□ -1
FDFT1-213ENST00000528729 VSTM5A8MXK1 200 aa8.79□□□□□ -1
FDFT1-213ENST00000528729 TNFRSF21O75509 655 aa8.79□□□□□ -1
FDFT1-213ENST00000528729 INHAP05111 366 aa8.79□□□□□ -1
FDFT1-213ENST00000528729 MAP3K10Q02779 954 aa8.79□□□□□ -1
FDFT1-213ENST00000528729 LONRF2Q1L5Z9 754 aa8.79□□□□□ -1
FDFT1-213ENST00000528729 LARP1BQ659C4 914 aaKnown RBP8.79□□□□□ -1
FDFT1-213ENST00000528729 SKA1Q96BD8 255 aa8.79□□□□□ -1
FDFT1-213ENST00000528729 MPP4Q96JB8 637 aa8.79□□□□□ -1
FDFT1-213ENST00000528729 TTC14Q96N46 770 aa8.79□□□□□ -1
FDFT1-213ENST00000528729 GPR101Q96P66 508 aaPredicted RBP8.79□□□□□ -1
FDFT1-213ENST00000528729 ELAC2Q9BQ52 826 aaKnown RBP8.79□□□□□ -1
FDFT1-213ENST00000528729 SLC5A4Q9NY91 659 aa8.79□□□□□ -1
FDFT1-213ENST00000528729 SCHIP1Q9P0W5 487 aaPredicted RBP8.79□□□□□ -1
FDFT1-213ENST00000528729 ERCC6L2Q5T890 1561 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 A6NHS1 94 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 ABLIM3O94929 683 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 U2AF1L5P0DN76 240 aaPredicted RBP8.78□□□□□ -1
FDFT1-213ENST00000528729 EPB42P16452 691 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 DDIT3P35638 169 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 TERF1P54274 439 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 U2AF1Q01081 240 aaKnown RBP eCLIP8.78□□□□□ -15e-31■□□□□ 8.6
FDFT1-213ENST00000528729 ITKQ08881 620 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 KRT72Q14CN4 511 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 PUM3Q15397 648 aaKnown RBP8.78□□□□□ -1
FDFT1-213ENST00000528729 ZC3H12BQ5HYM0 836 aaKnown RBP8.78□□□□□ -1
FDFT1-213ENST00000528729 POTEAQ6S8J7 498 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 MMS22LQ6ZRQ5 1243 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 TOGARAM2Q6ZUX3 1019 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 SUGP1Q8IWZ8 645 aaKnown RBP8.78□□□□□ -1
FDFT1-213ENST00000528729 PIP4P2Q8N4L2 257 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 GPR152Q8TDT2 470 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 SCLT1Q96NL6 688 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 SLC26A8Q96RN1 970 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 TRIM56Q9BRZ2 755 aaKnown RBP8.78□□□□□ -1
FDFT1-213ENST00000528729 LGR6Q9HBX8 967 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 C9orf78Q9NZ63 289 aaPredicted RBP8.78□□□□□ -1
FDFT1-213ENST00000528729 SERTAD1Q9UHV2 236 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 SPEF1Q9Y4P9 236 aa8.78□□□□□ -1
FDFT1-213ENST00000528729 CTDP1Q9Y5B0 961 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms