RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 TDRD3Q9H7E2 651 aaKnown RBP23.98■■□□□ 1.43
CAPN1-211ENST00000527739 FBXO3Q9UK99 471 aa23.98■■□□□ 1.43
CAPN1-211ENST00000527739 ANGEL1Q9UNK9 670 aaKnown RBP23.98■■□□□ 1.43
CAPN1-211ENST00000527739 SRGAP3O43295 1099 aa23.97■■□□□ 1.43
CAPN1-211ENST00000527739 IL15P40933 162 aaPredicted RBP23.97■■□□□ 1.43
CAPN1-211ENST00000527739 CRKP46108 304 aa23.97■■□□□ 1.43
CAPN1-211ENST00000527739 AOX1Q06278 1338 aa23.97■■□□□ 1.43
CAPN1-211ENST00000527739 DZIP1LQ8IYY4 767 aaKnown RBP23.97■■□□□ 1.43
CAPN1-211ENST00000527739 FZD1Q9UP38 647 aa23.97■■□□□ 1.43
CAPN1-211ENST00000527739 MKRN3Q13064 507 aaKnown RBP23.96■■□□□ 1.43
CAPN1-211ENST00000527739 ZNF70Q9UC06 446 aaPredicted RBP23.96■■□□□ 1.43
CAPN1-211ENST00000527739 PPP2R3BQ9Y5P8 575 aa23.96■■□□□ 1.43
CAPN1-211ENST00000527739 RASA3Q14644 834 aa23.95■■□□□ 1.42
CAPN1-211ENST00000527739 SUPT20HL1Q3ZLR7 823 aa23.95■■□□□ 1.42
CAPN1-211ENST00000527739 PPP1R12BO60237 982 aaPredicted RBP23.94■■□□□ 1.42
CAPN1-211ENST00000527739 GNAI2P04899 355 aa23.94■■□□□ 1.42
CAPN1-211ENST00000527739 COPRSQ9NQ92 184 aa23.94■■□□□ 1.42
CAPN1-211ENST00000527739 GNL3LQ9NVN8 582 aaKnown RBP23.94■■□□□ 1.42
CAPN1-211ENST00000527739 TCP10L2B9ZVM9 353 aa23.93■■□□□ 1.42
CAPN1-211ENST00000527739 TNFAIP1Q13829 316 aa23.93■■□□□ 1.42
CAPN1-211ENST00000527739 SPDYE2Q495Y8 402 aa23.93■■□□□ 1.42
CAPN1-211ENST00000527739 NBPF12Q5TAG4 269 aaPredicted RBP23.93■■□□□ 1.42
CAPN1-211ENST00000527739 TMEM57Q8N5G2 664 aa23.93■■□□□ 1.42
CAPN1-211ENST00000527739 TEKT1Q969V4 418 aa23.93■■□□□ 1.42
CAPN1-211ENST00000527739 SOX10P56693 466 aa23.92■■□□□ 1.42
CAPN1-211ENST00000527739 FTSJ3Q8IY81 847 aaKnown RBP23.92■■□□□ 1.42
CAPN1-211ENST00000527739 REM2Q8IYK8 340 aaPredicted RBP23.92■■□□□ 1.42
CAPN1-211ENST00000527739 WDR66Q8TBY9 1149 aa23.92■■□□□ 1.42
CAPN1-211ENST00000527739 SLC10A4Q96EP9 437 aa23.92■■□□□ 1.42
CAPN1-211ENST00000527739 TNRC18O15417 2968 aaPredicted RBP23.91■■□□□ 1.42
CAPN1-211ENST00000527739 COL1A1P02452 1464 aaPredicted RBP23.91■■□□□ 1.42
CAPN1-211ENST00000527739 SLC34A2O95436 690 aa23.9■■□□□ 1.42
CAPN1-211ENST00000527739 TNNI2P48788 182 aa23.9■■□□□ 1.42
CAPN1-211ENST00000527739 HDLBPQ00341 1268 aaKnown RBP23.9■■□□□ 1.42
CAPN1-211ENST00000527739 CTU1Q7Z7A3 348 aaKnown RBP23.9■■□□□ 1.42
CAPN1-211ENST00000527739 MAST3O60307 1309 aa23.89■■□□□ 1.42
CAPN1-211ENST00000527739 ZBED9Q6R2W3 1325 aa23.89■■□□□ 1.42
CAPN1-211ENST00000527739 TBC1D8O95759 1140 aa23.89■■□□□ 1.41
CAPN1-211ENST00000527739 ADORA1P30542 326 aa23.89■■□□□ 1.41
CAPN1-211ENST00000527739 TIMM10P62072 90 aa23.89■■□□□ 1.41
CAPN1-211ENST00000527739 TFCP2Q12800 502 aa23.89■■□□□ 1.41
CAPN1-211ENST00000527739 LDLRAD1Q5T700 205 aa23.89■■□□□ 1.41
CAPN1-211ENST00000527739 TMOD2Q9NZR1 351 aa23.89■■□□□ 1.41
CAPN1-211ENST00000527739 SUGT1Q9Y2Z0 365 aa23.89■■□□□ 1.41
CAPN1-211ENST00000527739 PHKA1P46020 1223 aa23.88■■□□□ 1.41
CAPN1-211ENST00000527739 IREB2P48200 963 aaKnown RBP23.88■■□□□ 1.41
CAPN1-211ENST00000527739 CACNB3P54284 484 aa23.88■■□□□ 1.41
CAPN1-211ENST00000527739 MTX1Q13505 466 aa23.88■■□□□ 1.41
CAPN1-211ENST00000527739 AKAP2Q9Y2D5 859 aa23.88■■□□□ 1.41
CAPN1-211ENST00000527739 G3BP1Q13283 466 aaKnown RBP eCLIP23.87■■□□□ 1.41
CAPN1-211ENST00000527739 ITPRIPQ8IWB1 547 aa23.87■■□□□ 1.41
CAPN1-211ENST00000527739 CLMNQ96JQ2 1002 aa23.87■■□□□ 1.41
CAPN1-211ENST00000527739 NEUROD6Q96NK8 337 aa23.87■■□□□ 1.41
CAPN1-211ENST00000527739 MRIQ9BWK5 157 aa23.87■■□□□ 1.41
CAPN1-211ENST00000527739 TMEM39BQ9GZU3 492 aa23.87■■□□□ 1.41
CAPN1-211ENST00000527739 DENND2AQ9ULE3 1009 aa23.87■■□□□ 1.41
CAPN1-211ENST00000527739 PNMA6EA0A0J9YXQ4 647 aa23.86■■□□□ 1.41
CAPN1-211ENST00000527739 USP2O75604 605 aaPredicted RBP23.86■■□□□ 1.41
CAPN1-211ENST00000527739 CCDC102BQ68D86 513 aa23.86■■□□□ 1.41
CAPN1-211ENST00000527739 ZDHHC15Q96MV8 337 aa23.86■■□□□ 1.41
CAPN1-211ENST00000527739 LDHBP07195 334 aaKnown RBP23.85■■□□□ 1.41
CAPN1-211ENST00000527739 MAP3K11Q16584 847 aa23.85■■□□□ 1.41
CAPN1-211ENST00000527739 SPRYD7Q5W111 196 aa23.85■■□□□ 1.41
CAPN1-211ENST00000527739 HHIPL2Q6UWX4 724 aa23.85■■□□□ 1.41
CAPN1-211ENST00000527739 ZNF296Q8WUU4 475 aaPredicted RBP23.85■■□□□ 1.41
CAPN1-211ENST00000527739 A0A1B0GUL7 405 aa23.84■■□□□ 1.41
CAPN1-211ENST00000527739 TM4SF4P48230 202 aa23.84■■□□□ 1.41
CAPN1-211ENST00000527739 SREBF2Q12772 1141 aa23.84■■□□□ 1.41
CAPN1-211ENST00000527739 GORABQ5T7V8 394 aa23.84■■□□□ 1.41
CAPN1-211ENST00000527739 APOBEC3HQ6NTF7 200 aaKnown RBP23.84■■□□□ 1.41
CAPN1-211ENST00000527739 CDAN1Q8IWY9 1227 aa23.84■■□□□ 1.41
CAPN1-211ENST00000527739 XAGE2Q96GT9 111 aa23.84■■□□□ 1.41
CAPN1-211ENST00000527739 C1orf115Q9H7X2 142 aa23.84■■□□□ 1.41
CAPN1-211ENST00000527739 SEMA3EO15041 775 aa23.83■■□□□ 1.41
CAPN1-211ENST00000527739 PRDX5P30044 214 aa23.83■■□□□ 1.41
CAPN1-211ENST00000527739 DIXDC1Q155Q3 683 aa23.83■■□□□ 1.41
CAPN1-211ENST00000527739 R3HDMLQ9H3Y0 253 aa23.83■■□□□ 1.41
CAPN1-211ENST00000527739 HPS5Q9UPZ3 1129 aa23.83■■□□□ 1.41
CAPN1-211ENST00000527739 SSC5DA1L4H1 1573 aa23.82■■□□□ 1.4
CAPN1-211ENST00000527739 OS9Q13438 667 aaPredicted RBP23.82■■□□□ 1.4
CAPN1-211ENST00000527739 MVPQ14764 893 aaKnown RBP23.82■■□□□ 1.4
CAPN1-211ENST00000527739 ANKRD13AQ8IZ07 590 aa23.82■■□□□ 1.4
CAPN1-211ENST00000527739 TEPSINQ96N21 525 aa23.82■■□□□ 1.4
CAPN1-211ENST00000527739 ABCF2Q9UG63 623 aa23.82■■□□□ 1.4
CAPN1-211ENST00000527739 RLBP1P12271 317 aa23.81■■□□□ 1.4
CAPN1-211ENST00000527739 WNK4Q96J92 1243 aa23.81■■□□□ 1.4
CAPN1-211ENST00000527739 UNCXA6NJT0 531 aa23.8■■□□□ 1.4
CAPN1-211ENST00000527739 GPR25O00155 361 aa23.8■■□□□ 1.4
CAPN1-211ENST00000527739 ATP8B2P98198 1209 aa23.8■■□□□ 1.4
CAPN1-211ENST00000527739 RASGRF1Q13972 1273 aa23.8■■□□□ 1.4
CAPN1-211ENST00000527739 ZGPATQ8N5A5 531 aaKnown RBP23.8■■□□□ 1.4
CAPN1-211ENST00000527739 ELP3Q9H9T3 547 aa23.8■■□□□ 1.4
CAPN1-211ENST00000527739 DAGLAQ9Y4D2 1042 aa23.8■■□□□ 1.4
CAPN1-211ENST00000527739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.8■■□□□ 1.4
CAPN1-211ENST00000527739 MANSC4A6NHS7 340 aaPredicted RBP23.79■■□□□ 1.4
CAPN1-211ENST00000527739 ZBTB48P10074 688 aaPredicted RBP23.78■■□□□ 1.4
CAPN1-211ENST00000527739 DZIP1Q86YF9 867 aaKnown RBP23.78■■□□□ 1.4
CAPN1-211ENST00000527739 USP40Q9NVE5 1235 aa23.78■■□□□ 1.4
CAPN1-211ENST00000527739 SALL1Q9NSC2 1324 aa23.78■■□□□ 1.4
CAPN1-211ENST00000527739 ZBTB7BO15156 539 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms