RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 ARAP2Q8WZ64 1704 aa16.45■□□□□ 0.22
CAPN1-209ENST00000527469 POLR2AP24928 1970 aaKnown RBP16.44■□□□□ 0.22
CAPN1-209ENST00000527469 CNTNAP1P78357 1384 aa16.44■□□□□ 0.22
CAPN1-209ENST00000527469 UQCRFS1P1P0C7P4 283 aa16.44■□□□□ 0.22
CAPN1-209ENST00000527469 HDLBPQ00341 1268 aaKnown RBP16.44■□□□□ 0.22
CAPN1-209ENST00000527469 RASGRF1Q13972 1273 aa16.44■□□□□ 0.22
CAPN1-209ENST00000527469 TTLL12Q14166 644 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-209ENST00000527469 SPTY2D1Q68D10 685 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-209ENST00000527469 ZBED3Q96IU2 234 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-209ENST00000527469 PRMT6Q96LA8 375 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-209ENST00000527469 TMOD2Q9NZR1 351 aa16.44■□□□□ 0.22
CAPN1-209ENST00000527469 ABCF2Q9UG63 623 aa16.44■□□□□ 0.22
CAPN1-209ENST00000527469 TLL2Q9Y6L7 1015 aa16.44■□□□□ 0.22
CAPN1-209ENST00000527469 RASSF10A6NK89 507 aa16.43■□□□□ 0.22
CAPN1-209ENST00000527469 ECE1P42892 770 aa16.43■□□□□ 0.22
CAPN1-209ENST00000527469 TNFAIP1Q13829 316 aa16.43■□□□□ 0.22
CAPN1-209ENST00000527469 GRIK5Q16478 980 aa16.43■□□□□ 0.22
CAPN1-209ENST00000527469 PCDHAC2Q9Y5I4 1007 aa16.43■□□□□ 0.22
CAPN1-209ENST00000527469 HUNKP57058 714 aa16.42■□□□□ 0.22
CAPN1-209ENST00000527469 PRAMEF18Q5VWM3 479 aa16.42■□□□□ 0.22
CAPN1-209ENST00000527469 SAPCD2Q86UD0 394 aa16.42■□□□□ 0.22
CAPN1-209ENST00000527469 DZIP1Q86YF9 867 aaKnown RBP16.42■□□□□ 0.22
CAPN1-209ENST00000527469 SPATA5Q8NB90 893 aa16.42■□□□□ 0.22
CAPN1-209ENST00000527469 DEFB129Q9H1M3 183 aa16.42■□□□□ 0.22
CAPN1-209ENST00000527469 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-209ENST00000527469 PDS5AQ29RF7 1337 aaKnown RBP16.42■□□□□ 0.22
CAPN1-209ENST00000527469 SALL1Q9NSC2 1324 aa16.42■□□□□ 0.22
CAPN1-209ENST00000527469 COL1A1P02452 1464 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-209ENST00000527469 TNNI2P48788 182 aa16.41■□□□□ 0.22
CAPN1-209ENST00000527469 VEGFBP49765 207 aa16.41■□□□□ 0.22
CAPN1-209ENST00000527469 AACSQ86V21 672 aa16.41■□□□□ 0.22
CAPN1-209ENST00000527469 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
CAPN1-209ENST00000527469 CLASRPQ8N2M8 674 aaKnown RBP16.41■□□□□ 0.22
CAPN1-209ENST00000527469 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
CAPN1-209ENST00000527469 DBNDD2Q9BQY9 259 aa16.41■□□□□ 0.22
CAPN1-209ENST00000527469 MRIQ9BWK5 157 aa16.41■□□□□ 0.22
CAPN1-209ENST00000527469 CCDC8Q9H0W5 538 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-209ENST00000527469 TDRD3Q9H7E2 651 aaKnown RBP16.41■□□□□ 0.22
CAPN1-209ENST00000527469 ZNF70Q9UC06 446 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-209ENST00000527469 PPP2R3BQ9Y5P8 575 aa16.41■□□□□ 0.22
CAPN1-209ENST00000527469 RAB11FIP3O75154 756 aa16.4■□□□□ 0.22
CAPN1-209ENST00000527469 ARID4AP29374 1257 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-209ENST00000527469 PRDX5P30044 214 aa16.4■□□□□ 0.22
CAPN1-209ENST00000527469 FKBP1BP68106 108 aa16.4■□□□□ 0.22
CAPN1-209ENST00000527469 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
CAPN1-209ENST00000527469 HHIPL2Q6UWX4 724 aa16.4■□□□□ 0.22
CAPN1-209ENST00000527469 SIRT2Q8IXJ6 389 aa16.4■□□□□ 0.22
CAPN1-209ENST00000527469 RHPN1Q8TCX5 695 aa16.4■□□□□ 0.22
CAPN1-209ENST00000527469 CAPNS2Q96L46 248 aa16.4■□□□□ 0.22
CAPN1-209ENST00000527469 ZDHHC15Q96MV8 337 aa16.4■□□□□ 0.22
CAPN1-209ENST00000527469 IL1RAPL2Q9NP60 686 aa16.4■□□□□ 0.22
CAPN1-209ENST00000527469 HMG20BQ9P0W2 317 aa16.4■□□□□ 0.22
CAPN1-209ENST00000527469 ZBTB22O15209 634 aa16.39■□□□□ 0.21
CAPN1-209ENST00000527469 IFIT2P09913 472 aaKnown RBP16.39■□□□□ 0.21
CAPN1-209ENST00000527469 DIXDC1Q155Q3 683 aa16.39■□□□□ 0.21
CAPN1-209ENST00000527469 SUPT20HL1Q3ZLR7 823 aa16.39■□□□□ 0.21
CAPN1-209ENST00000527469 CYP4F22Q6NT55 531 aa16.39■□□□□ 0.21
CAPN1-209ENST00000527469 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.21
CAPN1-209ENST00000527469 JMYQ8N9B5 988 aa16.39■□□□□ 0.21
CAPN1-209ENST00000527469 HHIPL1Q96JK4 782 aa16.39■□□□□ 0.21
CAPN1-209ENST00000527469 WDR33Q9C0J8 1336 aaKnown RBP16.39■□□□□ 0.21
CAPN1-209ENST00000527469 TCP10L2B9ZVM9 353 aa16.38■□□□□ 0.21
CAPN1-209ENST00000527469 GSTO1P78417 241 aa16.38■□□□□ 0.21
CAPN1-209ENST00000527469 RASA3Q14644 834 aa16.38■□□□□ 0.21
CAPN1-209ENST00000527469 EAF2Q96CJ1 260 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-209ENST00000527469 SNRKQ9NRH2 765 aa16.38■□□□□ 0.21
CAPN1-209ENST00000527469 RAI14Q9P0K7 980 aa16.38■□□□□ 0.21
CAPN1-209ENST00000527469 LRP2BPQ9P2M1 347 aa16.38■□□□□ 0.21
CAPN1-209ENST00000527469 DBNLQ9UJU6 430 aaKnown RBP16.38■□□□□ 0.21
CAPN1-209ENST00000527469 PPP1R12BO60237 982 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-209ENST00000527469 MCAMP43121 646 aa16.37■□□□□ 0.21
CAPN1-209ENST00000527469 ZNF157P51786 506 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-209ENST00000527469 PRKG1Q13976 671 aa16.37■□□□□ 0.21
CAPN1-209ENST00000527469 PI16Q6UXB8 463 aa16.37■□□□□ 0.21
CAPN1-209ENST00000527469 ARMC9Q7Z3E5 817 aa16.37■□□□□ 0.21
CAPN1-209ENST00000527469 AIDAQ96BJ3 306 aa16.37■□□□□ 0.21
CAPN1-209ENST00000527469 CRBNQ96SW2 442 aa16.37■□□□□ 0.21
CAPN1-209ENST00000527469 TLR7Q9NYK1 1049 aaKnown RBP16.37■□□□□ 0.21
CAPN1-209ENST00000527469 ECM29Q5VYK3 1845 aa16.37■□□□□ 0.21
CAPN1-209ENST00000527469 AOX1Q06278 1338 aa16.37■□□□□ 0.21
CAPN1-209ENST00000527469 CACNB3P54284 484 aa16.36■□□□□ 0.21
CAPN1-209ENST00000527469 APOBEC3HQ6NTF7 200 aaKnown RBP16.36■□□□□ 0.21
CAPN1-209ENST00000527469 RGMBQ6NW40 437 aa16.36■□□□□ 0.21
CAPN1-209ENST00000527469 TBC1D9Q6ZT07 1266 aa16.36■□□□□ 0.21
CAPN1-209ENST00000527469 CCDC102AQ96A19 550 aa16.36■□□□□ 0.21
CAPN1-209ENST00000527469 ZNF512BQ96KM6 892 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-209ENST00000527469 NOL10Q9BSC4 688 aaKnown RBP16.36■□□□□ 0.21
CAPN1-209ENST00000527469 LRRCC1Q9C099 1032 aa16.36■□□□□ 0.21
CAPN1-209ENST00000527469 DAGLAQ9Y4D2 1042 aa16.36■□□□□ 0.21
CAPN1-209ENST00000527469 LDHCP07864 332 aa16.35■□□□□ 0.21
CAPN1-209ENST00000527469 MECOMQ03112 1051 aa16.35■□□□□ 0.21
CAPN1-209ENST00000527469 BEGAINQ9BUH8 593 aa16.35■□□□□ 0.21
CAPN1-209ENST00000527469 USP40Q9NVE5 1235 aa16.35■□□□□ 0.21
CAPN1-209ENST00000527469 ANGEL1Q9UNK9 670 aaKnown RBP16.35■□□□□ 0.21
CAPN1-209ENST00000527469 PAPPA2Q9BXP8 1791 aa16.35■□□□□ 0.21
CAPN1-209ENST00000527469 UBE2Q2LH0YL09 131 aa16.34■□□□□ 0.21
CAPN1-209ENST00000527469 MAP2K1Q02750 393 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-209ENST00000527469 FKBP1CQ5VVH2 108 aa16.34■□□□□ 0.21
CAPN1-209ENST00000527469 HOOK2Q96ED9 719 aa16.34■□□□□ 0.21
CAPN1-209ENST00000527469 TMEM39BQ9GZU3 492 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms