RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 BACH2Q9BYV9 841 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 DNAI1Q9UI46 699 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 FAN1Q9Y2M0 1017 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 ANKARQ7Z5J8 1434 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 PNMA8AQ86V59 439 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-216ENST00000527467 USP6NLQ92738 828 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 THEGQ9P2T0 379 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 TLDC2A0PJX2 215 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 CNGA1P29973 690 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 CLUL1Q15846 466 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 CCDC62Q6P9F0 684 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 RUNDC1Q96C34 613 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 BICD1Q96G01 975 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 JAKMIP1Q96N16 626 aaKnown RBP8.18□□□□□ -1.1
CTNND1-216ENST00000527467 OVOS2A0A0G2JMS6 1433 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 OVOS2A0A0J9YW53 1432 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 TNS3Q68CZ2 1445 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 OVOS2Q6IE36 1432 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 CTAGE9A4FU28 777 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 PHACTR2O75167 634 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 ALDH1B1P30837 517 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 NOLC1Q14978 699 aaKnown RBP eCLIP8.18□□□□□ -1.1
CTNND1-216ENST00000527467 MAP3K21Q5TCX8 1036 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 HDXQ7Z353 690 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 OGFOD1Q8N543 542 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 CNNM3Q8NE01 707 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 SMARCC2Q8TAQ2 1214 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 CARD10Q9BWT7 1032 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 WDR46O15213 610 aaKnown RBP8.17□□□□□ -1.1
CTNND1-216ENST00000527467 PEX19P40855 299 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 ECE1P42892 770 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 RAP1GDS1P52306 607 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 LRRC23Q53EV4 343 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-216ENST00000527467 ATP2A3Q93084 1043 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 BAG1Q99933 345 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-216ENST00000527467 HAUS8Q9BT25 410 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 LARSQ9P2J5 1176 aaKnown RBP8.17□□□□□ -1.1
CTNND1-216ENST00000527467 FAM169AQ9Y6X4 670 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 CCDC196A0A1B0GTZ2 297 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 KRT13P13646 458 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 RBM5P52756 815 aaKnown RBP eCLIP8.17□□□□□ -1.1
CTNND1-216ENST00000527467 RASIP1Q5U651 963 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 TCERG1LQ5VWI1 586 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 VSIG1Q86XK7 387 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 KLHDC4Q8TBB5 520 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 AFAP1L1Q8TED9 768 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 LMBR1Q8WVP7 490 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 GGNBP2Q9H3C7 697 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 GIMAP4Q9NUV9 329 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.17□□□□□ -1.14e-9■□□□□ 9.9
CTNND1-216ENST00000527467 LUC7L3O95232 432 aaKnown RBP8.17□□□□□ -1.1
CTNND1-216ENST00000527467 SLMAPQ14BN4 828 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 TMEM266Q2M3C6 531 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 EAPPQ56P03 285 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-216ENST00000527467 RBM17Q96I25 401 aaKnown RBP8.17□□□□□ -1.1
CTNND1-216ENST00000527467 Q9H521 79 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 ADGRF5Q8IZF2 1346 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 CLTCQ00610 1675 aaKnown RBP8.17□□□□□ -1.1
CTNND1-216ENST00000527467 POLR3AO14802 1390 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-216ENST00000527467 GFAPP14136 432 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 GSTA5Q7RTV2 222 aa8.17□□□□□ -1.1
CTNND1-216ENST00000527467 UPF1Q92900 1129 aaKnown RBP eCLIP8.17□□□□□ -1.16e-7■■□□□ 14.4
CTNND1-216ENST00000527467 ABT1Q9ULW3 272 aaKnown RBP8.17□□□□□ -1.1
CTNND1-216ENST00000527467 PALM3A6NDB9 673 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-216ENST00000527467 SMIM23A6NLE4 172 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 IGSF3O75054 1194 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 ZNF131P52739 623 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 STXBP4Q6ZWJ1 553 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 CCDC65Q8IXS2 484 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 SRCIN1Q9C0H9 1055 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 FAM177BA6PVY3 158 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 OPHN1O60890 802 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 AMPD3Q01432 767 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 GABPB1Q06547 395 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-216ENST00000527467 MUM1Q2TAK8 710 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 FERMT3Q86UX7 667 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 ZNF219Q9P2Y4 722 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-216ENST00000527467 IGHMBP2P38935 993 aaKnown RBP8.16□□□□□ -1.1
CTNND1-216ENST00000527467 TRIM60Q495X7 471 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 TBC1D5Q92609 795 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 TBC1D31Q96DN5 1066 aa8.16□□□□□ -1.1
CTNND1-216ENST00000527467 PYM1Q9BRP8 204 aaKnown RBP8.16□□□□□ -1.1
CTNND1-216ENST00000527467 LRRD1A4D1F6 860 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 H7C1D1 291 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 PPFIA3O75145 1194 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 CRCPO75575 148 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 ZRANB2O95218 330 aaKnown RBP eCLIP8.15□□□□□ -1.17e-11■■■■■ 70
CTNND1-216ENST00000527467 ZNF165P49910 485 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 CC2D2BQ6DHV5 1058 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 USP37Q86T82 979 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 NIM1KQ8IY84 436 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 CKAP2LQ8IYA6 745 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 AFAP1L2Q8N4X5 818 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 PIM2Q9P1W9 311 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 CEP104O60308 925 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 ZBTB7AO95365 584 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 SLF2Q8IX21 1173 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 ANKFY1Q9P2R3 1169 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 GNAI2P04899 355 aa8.15□□□□□ -1.1
CTNND1-216ENST00000527467 SKILP12757 684 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms