RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 ZGPATQ8N5A5 531 aaKnown RBP20.32■□□□□ 0.84
SMCO4-204ENST00000527149 MTMR14Q8NCE2 650 aa20.32■□□□□ 0.84
SMCO4-204ENST00000527149 PIH1D3Q9NQM4 214 aaKnown RBP20.32■□□□□ 0.84
SMCO4-204ENST00000527149 STAP2Q9UGK3 403 aa20.32■□□□□ 0.84
SMCO4-204ENST00000527149 PCDHAC2Q9Y5I4 1007 aa20.32■□□□□ 0.84
SMCO4-204ENST00000527149 AOX1Q06278 1338 aa20.31■□□□□ 0.84
SMCO4-204ENST00000527149 PDE4AP27815 886 aa20.31■□□□□ 0.84
SMCO4-204ENST00000527149 CENPQQ7L2Z9 268 aaPredicted RBP20.31■□□□□ 0.84
SMCO4-204ENST00000527149 OGFOD1Q8N543 542 aa20.31■□□□□ 0.84
SMCO4-204ENST00000527149 HAUS7Q99871 368 aa20.31■□□□□ 0.84
SMCO4-204ENST00000527149 ANTXR1Q9H6X2 564 aa20.31■□□□□ 0.84
SMCO4-204ENST00000527149 SERPINA10Q9UK55 444 aa20.31■□□□□ 0.84
SMCO4-204ENST00000527149 HDAC9Q9UKV0 1011 aa20.31■□□□□ 0.84
SMCO4-204ENST00000527149 MYH7P12883 1935 aa20.3■□□□□ 0.84
SMCO4-204ENST00000527149 LDHBP07195 334 aaKnown RBP20.3■□□□□ 0.84
SMCO4-204ENST00000527149 PDE1AP54750 535 aa20.3■□□□□ 0.84
SMCO4-204ENST00000527149 HDLBPQ00341 1268 aaKnown RBP20.3■□□□□ 0.84
SMCO4-204ENST00000527149 PNMA8AQ86V59 439 aaPredicted RBP20.3■□□□□ 0.84
SMCO4-204ENST00000527149 EDC3Q96F86 508 aaKnown RBP20.3■□□□□ 0.84
SMCO4-204ENST00000527149 GPATCH3Q96I76 525 aa20.3■□□□□ 0.84
SMCO4-204ENST00000527149 BOLA2Q9H3K6 86 aa20.3■□□□□ 0.84
SMCO4-204ENST00000527149 ABCF2Q9UG63 623 aa20.3■□□□□ 0.84
SMCO4-204ENST00000527149 MAST3O60307 1309 aa20.29■□□□□ 0.84
SMCO4-204ENST00000527149 ASTN2O75129 1339 aaPredicted RBP20.29■□□□□ 0.84
SMCO4-204ENST00000527149 POLR2AP24928 1970 aaKnown RBP20.29■□□□□ 0.84
SMCO4-204ENST00000527149 SPDYE2BA6NHP3 402 aa20.29■□□□□ 0.84
SMCO4-204ENST00000527149 SPDYE6P0CI01 402 aa20.29■□□□□ 0.84
SMCO4-204ENST00000527149 CRKP46108 304 aa20.29■□□□□ 0.84
SMCO4-204ENST00000527149 DIXDC1Q155Q3 683 aa20.29■□□□□ 0.84
SMCO4-204ENST00000527149 LDHDQ86WU2 507 aa20.29■□□□□ 0.84
SMCO4-204ENST00000527149 MRIQ9BWK5 157 aa20.29■□□□□ 0.84
SMCO4-204ENST00000527149 ZBTB47Q9UFB7 747 aaPredicted RBP20.29■□□□□ 0.84
SMCO4-204ENST00000527149 PGAP2Q9UHJ9 254 aa20.29■□□□□ 0.84
SMCO4-204ENST00000527149 GAKO14976 1311 aa20.28■□□□□ 0.84
SMCO4-204ENST00000527149 WNT10BO00744 389 aa20.28■□□□□ 0.84
SMCO4-204ENST00000527149 MECOMQ03112 1051 aa20.28■□□□□ 0.84
SMCO4-204ENST00000527149 NBPF9Q3BBW0 867 aa20.28■□□□□ 0.84
SMCO4-204ENST00000527149 CFAP100Q494V2 611 aa20.28■□□□□ 0.84
SMCO4-204ENST00000527149 EAPPQ56P03 285 aaPredicted RBP20.28■□□□□ 0.84
SMCO4-204ENST00000527149 ERICH6Q7L0X2 663 aa20.28■□□□□ 0.84
SMCO4-204ENST00000527149 PLEKHM2Q8IWE5 1019 aa20.28■□□□□ 0.84
SMCO4-204ENST00000527149 NSUN4Q96CB9 384 aaKnown RBP20.28■□□□□ 0.84
SMCO4-204ENST00000527149 CCDC136Q96JN2 1154 aa20.28■□□□□ 0.84
SMCO4-204ENST00000527149 DNAJC2Q99543 621 aaKnown RBP20.28■□□□□ 0.84
SMCO4-204ENST00000527149 GOLIM4O00461 696 aa20.27■□□□□ 0.84
SMCO4-204ENST00000527149 RBM26Q5T8P6 1007 aaKnown RBP20.27■□□□□ 0.84
SMCO4-204ENST00000527149 SPTY2D1Q68D10 685 aaPredicted RBP20.27■□□□□ 0.84
SMCO4-204ENST00000527149 HHIPL2Q6UWX4 724 aa20.27■□□□□ 0.84
SMCO4-204ENST00000527149 ZDHHC15Q96MV8 337 aa20.27■□□□□ 0.84
SMCO4-204ENST00000527149 PAG1Q9NWQ8 432 aa20.27■□□□□ 0.84
SMCO4-204ENST00000527149 PPP4R2Q9NY27 417 aa20.27■□□□□ 0.84
SMCO4-204ENST00000527149 DAGLAQ9Y4D2 1042 aa20.27■□□□□ 0.84
SMCO4-204ENST00000527149 GLRX3O76003 335 aaKnown RBP20.26■□□□□ 0.83
SMCO4-204ENST00000527149 APOBEC3HQ6NTF7 200 aaKnown RBP20.26■□□□□ 0.83
SMCO4-204ENST00000527149 DZIP1Q86YF9 867 aaKnown RBP20.26■□□□□ 0.83
SMCO4-204ENST00000527149 RBM46Q8TBY0 533 aaKnown RBP20.26■□□□□ 0.83
SMCO4-204ENST00000527149 ZC3H15Q8WU90 426 aaKnown RBP20.26■□□□□ 0.83
SMCO4-204ENST00000527149 TEKT1Q969V4 418 aa20.26■□□□□ 0.83
SMCO4-204ENST00000527149 PRMT6Q96LA8 375 aaPredicted RBP20.26■□□□□ 0.83
SMCO4-204ENST00000527149 OSBPL3Q9H4L5 887 aa20.26■□□□□ 0.83
SMCO4-204ENST00000527149 ERC2O15083 957 aa20.25■□□□□ 0.83
SMCO4-204ENST00000527149 IGSF3O75054 1194 aa20.25■□□□□ 0.83
SMCO4-204ENST00000527149 TOMM70O94826 608 aa20.25■□□□□ 0.83
SMCO4-204ENST00000527149 DLGAP5Q15398 846 aa20.25■□□□□ 0.83
SMCO4-204ENST00000527149 FAM163AQ96GL9 167 aaPredicted RBP20.25■□□□□ 0.83
SMCO4-204ENST00000527149 GGA3Q9NZ52 723 aa20.25■□□□□ 0.83
SMCO4-204ENST00000527149 LRP2BPQ9P2M1 347 aa20.25■□□□□ 0.83
SMCO4-204ENST00000527149 MROH7-TTC4A0A0A0MT08 1334 aa20.25■□□□□ 0.83
SMCO4-204ENST00000527149 TTF1Q15361 905 aaPredicted RBP20.24■□□□□ 0.83
SMCO4-204ENST00000527149 RAI14Q9P0K7 980 aa20.24■□□□□ 0.83
SMCO4-204ENST00000527149 RFX7Q2KHR2 1363 aa20.23■□□□□ 0.83
SMCO4-204ENST00000527149 IDH1O75874 414 aaKnown RBP20.23■□□□□ 0.83
SMCO4-204ENST00000527149 SPDYE2Q495Y8 402 aa20.23■□□□□ 0.83
SMCO4-204ENST00000527149 CHADLQ6NUI6 762 aa20.23■□□□□ 0.83
SMCO4-204ENST00000527149 ADGRA1Q86SQ6 560 aa20.23■□□□□ 0.83
SMCO4-204ENST00000527149 PITPNM2Q9BZ72 1349 aa20.23■□□□□ 0.83
SMCO4-204ENST00000527149 ANGEL2Q5VTE6 544 aaKnown RBP20.22■□□□□ 0.83
SMCO4-204ENST00000527149 MAP1SQ66K74 1059 aaPredicted RBP20.22■□□□□ 0.83
SMCO4-204ENST00000527149 CDK5RAP2Q96SN8 1893 aa20.22■□□□□ 0.83
SMCO4-204ENST00000527149 TCRBV5S4A2TA0A5A2 114 aa20.21■□□□□ 0.83
SMCO4-204ENST00000527149 PDE6AP16499 860 aa20.21■□□□□ 0.83
SMCO4-204ENST00000527149 RBM5P52756 815 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMCO4-204ENST00000527149 MAP3K12Q12852 859 aa20.21■□□□□ 0.83
SMCO4-204ENST00000527149 NAA16Q6N069 864 aaPredicted RBP20.21■□□□□ 0.83
SMCO4-204ENST00000527149 SKAP1Q86WV1 359 aa20.21■□□□□ 0.83
SMCO4-204ENST00000527149 KBTBD3Q8NAB2 608 aa20.21■□□□□ 0.83
SMCO4-204ENST00000527149 GPR75-ASB3A0A0A6YYF3 556 aa20.2■□□□□ 0.82
SMCO4-204ENST00000527149 CLRN2A0PK11 232 aa20.2■□□□□ 0.82
SMCO4-204ENST00000527149 MAP4K4O95819 1239 aaPredicted RBP20.2■□□□□ 0.82
SMCO4-204ENST00000527149 ITGBL1O95965 494 aaPredicted RBP20.2■□□□□ 0.82
SMCO4-204ENST00000527149 CHGBP05060 677 aa20.2■□□□□ 0.82
SMCO4-204ENST00000527149 GSTO1P78417 241 aa20.2■□□□□ 0.82
SMCO4-204ENST00000527149 TMED8Q6PL24 325 aaPredicted RBP20.2■□□□□ 0.82
SMCO4-204ENST00000527149 MAGEB6Q8N7X4 407 aa20.2■□□□□ 0.82
SMCO4-204ENST00000527149 SMC1BQ8NDV3 1235 aa20.2■□□□□ 0.82
SMCO4-204ENST00000527149 TDRD3Q9H7E2 651 aaKnown RBP20.2■□□□□ 0.82
SMCO4-204ENST00000527149 ZNF70Q9UC06 446 aaPredicted RBP20.2■□□□□ 0.82
SMCO4-204ENST00000527149 CLEC11AQ9Y240 323 aa20.2■□□□□ 0.82
SMCO4-204ENST00000527149 FOCADQ5VW36 1801 aa20.2■□□□□ 0.82
SMCO4-204ENST00000527149 AK9Q5TCS8 1911 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms