RNA–Protein interactions for RNA: ENST00000527052.5

NOD2-204, Transcript of nucleotide binding oligomerization domain containing 2, human

TSL 1 (best)

Gene NOD2, Length 338 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOD2-204	ENST00000527052	UBTFL1	P0CB47	393 aa	Predicted RBP	18.43	■□□□□ 0.54
NOD2-204	ENST00000527052	TNNI2	P48788	182 aa		18.43	■□□□□ 0.54
NOD2-204	ENST00000527052	CHAF1A	Q13111	956 aa	Predicted RBP	18.43	■□□□□ 0.54
NOD2-204	ENST00000527052	PKN2	Q16513	984 aa	Known RBP	18.43	■□□□□ 0.54
NOD2-204	ENST00000527052	KLHDC4	Q8TBB5	520 aa		18.43	■□□□□ 0.54
NOD2-204	ENST00000527052	FBXO3	Q9UK99	471 aa		18.43	■□□□□ 0.54
NOD2-204	ENST00000527052	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.43	■□□□□ 0.54
NOD2-204	ENST00000527052	SUGT1	Q9Y2Z0	365 aa		18.43	■□□□□ 0.54
NOD2-204	ENST00000527052	MAST3	O60307	1309 aa		18.43	■□□□□ 0.54
NOD2-204	ENST00000527052	GPR25	O00155	361 aa		18.42	■□□□□ 0.54
NOD2-204	ENST00000527052	FGFR2	P21802	821 aa		18.42	■□□□□ 0.54
NOD2-204	ENST00000527052	RFX5	P48382	616 aa	Predicted RBP	18.42	■□□□□ 0.54
NOD2-204	ENST00000527052	ANKRD13A	Q8IZ07	590 aa		18.42	■□□□□ 0.54
NOD2-204	ENST00000527052	ZNF296	Q8WUU4	475 aa	Predicted RBP	18.42	■□□□□ 0.54
NOD2-204	ENST00000527052	TEKT1	Q969V4	418 aa		18.42	■□□□□ 0.54
NOD2-204	ENST00000527052	WNK4	Q96J92	1243 aa		18.42	■□□□□ 0.54
NOD2-204	ENST00000527052	TDRD3	Q9H7E2	651 aa	Known RBP	18.42	■□□□□ 0.54
NOD2-204	ENST00000527052	FZD1	Q9UP38	647 aa		18.42	■□□□□ 0.54
NOD2-204	ENST00000527052	SLC5A1	P13866	664 aa		18.41	■□□□□ 0.54
NOD2-204	ENST00000527052	BCAM	P50895	628 aa		18.41	■□□□□ 0.54
NOD2-204	ENST00000527052	LPIN2	Q92539	896 aa		18.41	■□□□□ 0.54
NOD2-204	ENST00000527052	CLMN	Q96JQ2	1002 aa		18.41	■□□□□ 0.54
NOD2-204	ENST00000527052	MRI	Q9BWK5	157 aa		18.41	■□□□□ 0.54
NOD2-204	ENST00000527052	USP2	O75604	605 aa	Predicted RBP	18.4	■□□□□ 0.54
NOD2-204	ENST00000527052	NOB1	Q9ULX3	412 aa	Known RBP	18.4	■□□□□ 0.54
NOD2-204	ENST00000527052	LAMB1	P07942	1786 aa		18.4	■□□□□ 0.54
NOD2-204	ENST00000527052	TCP10L2	B9ZVM9	353 aa		18.39	■□□□□ 0.53
NOD2-204	ENST00000527052	CIAO1	O76071	339 aa		18.39	■□□□□ 0.53
NOD2-204	ENST00000527052	IFNL1	Q8IU54	200 aa		18.39	■□□□□ 0.53
NOD2-204	ENST00000527052	WDR66	Q8TBY9	1149 aa		18.39	■□□□□ 0.53
NOD2-204	ENST00000527052	TMOD2	Q9NZR1	351 aa		18.39	■□□□□ 0.53
NOD2-204	ENST00000527052	FKTN	O75072	461 aa		18.38	■□□□□ 0.53
NOD2-204	ENST00000527052	GRIK5	Q16478	980 aa		18.38	■□□□□ 0.53
NOD2-204	ENST00000527052	OTUD7B	Q6GQQ9	843 aa		18.38	■□□□□ 0.53
NOD2-204	ENST00000527052	ATG9A	Q7Z3C6	839 aa		18.38	■□□□□ 0.53
NOD2-204	ENST00000527052	ZDHHC15	Q96MV8	337 aa		18.38	■□□□□ 0.53
NOD2-204	ENST00000527052	TEPSIN	Q96N21	525 aa		18.38	■□□□□ 0.53
NOD2-204	ENST00000527052	TNRC18	O15417	2968 aa	Predicted RBP	18.37	■□□□□ 0.53
NOD2-204	ENST00000527052	FKBP1C	Q5VVH2	108 aa		18.37	■□□□□ 0.53
NOD2-204	ENST00000527052	HHIPL2	Q6UWX4	724 aa		18.37	■□□□□ 0.53
NOD2-204	ENST00000527052	ARHGAP45	Q92619	1136 aa		18.37	■□□□□ 0.53
NOD2-204	ENST00000527052	HOOK2	Q96ED9	719 aa		18.37	■□□□□ 0.53
NOD2-204	ENST00000527052	TMEM39B	Q9GZU3	492 aa		18.37	■□□□□ 0.53
NOD2-204	ENST00000527052	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	18.37	■□□□□ 0.53
NOD2-204	ENST00000527052	CEP126	Q9P2H0	1117 aa		18.37	■□□□□ 0.53
NOD2-204	ENST00000527052	RARS	P54136	660 aa	Known RBP	18.36	■□□□□ 0.53
NOD2-204	ENST00000527052	ATP2B3	Q16720	1220 aa		18.36	■□□□□ 0.53
NOD2-204	ENST00000527052	DIEXF	Q68CQ4	756 aa	Known RBP	18.36	■□□□□ 0.53
NOD2-204	ENST00000527052	FAM83A	Q86UY5	434 aa		18.36	■□□□□ 0.53
NOD2-204	ENST00000527052	SIL1	Q9H173	461 aa		18.36	■□□□□ 0.53
NOD2-204	ENST00000527052	GNL3L	Q9NVN8	582 aa	Known RBP	18.36	■□□□□ 0.53
NOD2-204	ENST00000527052	HPS5	Q9UPZ3	1129 aa		18.36	■□□□□ 0.53
NOD2-204	ENST00000527052	LRRFIP2	Q9Y608	721 aa	Known RBP	18.36	■□□□□ 0.53
NOD2-204	ENST00000527052	OTOF	Q9HC10	1997 aa		18.35	■□□□□ 0.53
NOD2-204	ENST00000527052	RPAP1	Q9BWH6	1393 aa	Predicted RBP	18.35	■□□□□ 0.53
NOD2-204	ENST00000527052	IGF2BP3	O00425	579 aa	Known RBP eCLIP	18.35	■□□□□ 0.53
NOD2-204	ENST00000527052	IL15	P40933	162 aa	Predicted RBP	18.35	■□□□□ 0.53
NOD2-204	ENST00000527052	FBXO46	Q6PJ61	603 aa	Predicted RBP	18.35	■□□□□ 0.53
NOD2-204	ENST00000527052	CSAD	Q9Y600	493 aa		18.35	■□□□□ 0.53
NOD2-204	ENST00000527052	TESPA1	A2RU30	521 aa	Predicted RBP	18.34	■□□□□ 0.53
NOD2-204	ENST00000527052	SEMA3E	O15041	775 aa		18.34	■□□□□ 0.53
NOD2-204	ENST00000527052	GNAI3	P08754	354 aa		18.34	■□□□□ 0.53
NOD2-204	ENST00000527052	GJA5	P36382	358 aa		18.34	■□□□□ 0.53
NOD2-204	ENST00000527052	MAP3K9	P80192	1104 aa		18.34	■□□□□ 0.53
NOD2-204	ENST00000527052	APOBEC3H	Q6NTF7	200 aa	Known RBP	18.34	■□□□□ 0.53
NOD2-204	ENST00000527052	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	18.34	■□□□□ 0.53
NOD2-204	ENST00000527052	OPTN	Q96CV9	577 aa		18.34	■□□□□ 0.53
NOD2-204	ENST00000527052	ELP3	Q9H9T3	547 aa		18.34	■□□□□ 0.53
NOD2-204	ENST00000527052	MYH13	Q9UKX3	1938 aa		18.33	■□□□□ 0.53
NOD2-204	ENST00000527052	HTT	P42858	3142 aa		18.33	■□□□□ 0.53
NOD2-204	ENST00000527052	ZBTB22	O15209	634 aa		18.33	■□□□□ 0.52
NOD2-204	ENST00000527052	VGLL4	Q14135	290 aa		18.33	■□□□□ 0.52
NOD2-204	ENST00000527052	INTS3	Q68E01	1043 aa	Known RBP	18.33	■□□□□ 0.52
NOD2-204	ENST00000527052	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	18.33	■□□□□ 0.52
NOD2-204	ENST00000527052	CDAN1	Q8IWY9	1227 aa		18.33	■□□□□ 0.52
NOD2-204	ENST00000527052	MEIS3	Q99687	375 aa		18.33	■□□□□ 0.52
NOD2-204	ENST00000527052	R3HDML	Q9H3Y0	253 aa		18.33	■□□□□ 0.52
NOD2-204	ENST00000527052	COPRS	Q9NQ92	184 aa		18.33	■□□□□ 0.52
NOD2-204	ENST00000527052	IPO8	O15397	1037 aa	Known RBP	18.32	■□□□□ 0.52
NOD2-204	ENST00000527052	CACNB3	P54284	484 aa		18.32	■□□□□ 0.52
NOD2-204	ENST00000527052	SOX10	P56693	466 aa		18.32	■□□□□ 0.52
NOD2-204	ENST00000527052	DCAF15	Q66K64	600 aa		18.32	■□□□□ 0.52
NOD2-204	ENST00000527052	DENND2A	Q9ULE3	1009 aa		18.32	■□□□□ 0.52
NOD2-204	ENST00000527052	SALL1	Q9NSC2	1324 aa		18.31	■□□□□ 0.52
NOD2-204	ENST00000527052	GTF2A2	P52657	109 aa		18.31	■□□□□ 0.52
NOD2-204	ENST00000527052	LDHB	P07195	334 aa	Known RBP	18.3	■□□□□ 0.52
NOD2-204	ENST00000527052	CRHR2	Q13324	411 aa		18.3	■□□□□ 0.52
NOD2-204	ENST00000527052	MTX1	Q13505	466 aa		18.3	■□□□□ 0.52
NOD2-204	ENST00000527052	ZGPAT	Q8N5A5	531 aa	Known RBP	18.3	■□□□□ 0.52
NOD2-204	ENST00000527052	ERO1A	Q96HE7	468 aa		18.3	■□□□□ 0.52
NOD2-204	ENST00000527052	MS4A4A	Q96JQ5	239 aa		18.3	■□□□□ 0.52
NOD2-204	ENST00000527052	PA2G4	Q9UQ80	394 aa	Known RBP	18.3	■□□□□ 0.52
NOD2-204	ENST00000527052	SPDYE5	A6NIY4	337 aa		18.29	■□□□□ 0.52
NOD2-204	ENST00000527052	PRDX5	P30044	214 aa		18.29	■□□□□ 0.52
NOD2-204	ENST00000527052	OTUD5	Q96G74	571 aa		18.29	■□□□□ 0.52
NOD2-204	ENST00000527052	WRNIP1	Q96S55	665 aa		18.29	■□□□□ 0.52
NOD2-204	ENST00000527052	PTPN18	Q99952	460 aa		18.29	■□□□□ 0.52
NOD2-204	ENST00000527052	DAGLA	Q9Y4D2	1042 aa		18.29	■□□□□ 0.52
NOD2-204	ENST00000527052	PDS5A	Q29RF7	1337 aa	Known RBP	18.28	■□□□□ 0.52
NOD2-204	ENST00000527052	CCL15-CCL14	A0A0B4J2E2	113 aa		18.28	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms