RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 SPDYE2Q495Y8 402 aa15.06■□□□□ 0
SSBP3-210ENST00000525990 LDLRAD1Q5T700 205 aa15.06■□□□□ 0
SSBP3-210ENST00000525990 INTS3Q68E01 1043 aaKnown RBP15.06■□□□□ 0
SSBP3-210ENST00000525990 ARMC9Q7Z3E5 817 aa15.06■□□□□ 0
SSBP3-210ENST00000525990 MCOLN1Q9GZU1 580 aa15.06■□□□□ 0
SSBP3-210ENST00000525990 SERPINA10Q9UK55 444 aa15.06■□□□□ 0
SSBP3-210ENST00000525990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.06■□□□□ 0
SSBP3-210ENST00000525990 AK9Q5TCS8 1911 aa15.05■□□□□ 0
SSBP3-210ENST00000525990 TCP10L2B9ZVM9 353 aa15.05■□□□□ -0
SSBP3-210ENST00000525990 LPIN2Q92539 896 aa15.05■□□□□ -0
SSBP3-210ENST00000525990 ARHGAP45Q92619 1136 aa15.05■□□□□ -0
SSBP3-210ENST00000525990 TMEM39BQ9GZU3 492 aa15.05■□□□□ -0
SSBP3-210ENST00000525990 SAGE1Q9NXZ1 904 aa15.05■□□□□ -0
SSBP3-210ENST00000525990 SLC5A1P13866 664 aa15.04■□□□□ -0
SSBP3-210ENST00000525990 ADORA1P30542 326 aa15.04■□□□□ -0
SSBP3-210ENST00000525990 DGKZQ13574 1117 aa15.04■□□□□ -0
SSBP3-210ENST00000525990 ATP2B3Q16720 1220 aa15.04■□□□□ -0
SSBP3-210ENST00000525990 TEPSINQ96N21 525 aa15.04■□□□□ -0
SSBP3-210ENST00000525990 PPP2R3BQ9Y5P8 575 aa15.04■□□□□ -0
SSBP3-210ENST00000525990 USP2O75604 605 aaPredicted RBP15.03■□□□□ -0
SSBP3-210ENST00000525990 CIAO1O76071 339 aa15.03■□□□□ -0
SSBP3-210ENST00000525990 TBC1D8O95759 1140 aa15.03■□□□□ -0
SSBP3-210ENST00000525990 PHKA1P46020 1223 aa15.03■□□□□ -0
SSBP3-210ENST00000525990 MAP3K11Q16584 847 aa15.03■□□□□ -0
SSBP3-210ENST00000525990 SPRYD7Q5W111 196 aa15.03■□□□□ -0
SSBP3-210ENST00000525990 ATF7IPQ6VMQ6 1270 aa15.03■□□□□ -0
SSBP3-210ENST00000525990 R3HDMLQ9H3Y0 253 aa15.03■□□□□ -0
SSBP3-210ENST00000525990 MYO5AQ9Y4I1 1855 aaKnown RBP15.03■□□□□ -0
SSBP3-210ENST00000525990 DOCK2Q92608 1830 aa15.02■□□□□ -0
SSBP3-210ENST00000525990 GJA5P36382 358 aa15.02■□□□□ -0
SSBP3-210ENST00000525990 TMEM57Q8N5G2 664 aa15.02■□□□□ -0
SSBP3-210ENST00000525990 TBC1D22AQ8WUA7 517 aa15.02■□□□□ -0
SSBP3-210ENST00000525990 COPRSQ9NQ92 184 aa15.02■□□□□ -0
SSBP3-210ENST00000525990 CEP126Q9P2H0 1117 aa15.02■□□□□ -0
SSBP3-210ENST00000525990 PNMA6EA0A0J9YXQ4 647 aa15.01□□□□□ -0.01
SSBP3-210ENST00000525990 CCDC85CA6NKD9 419 aa15.01□□□□□ -0.01
SSBP3-210ENST00000525990 SRGAP3O43295 1099 aa15.01□□□□□ -0.01
SSBP3-210ENST00000525990 PRDX5P30044 214 aa15.01□□□□□ -0.01
SSBP3-210ENST00000525990 IL15P40933 162 aaPredicted RBP15.01□□□□□ -0.01
SSBP3-210ENST00000525990 TM4SF4P48230 202 aa15.01□□□□□ -0.01
SSBP3-210ENST00000525990 DIXDC1Q155Q3 683 aa15.01□□□□□ -0.01
SSBP3-210ENST00000525990 APOBEC3HQ6NTF7 200 aaKnown RBP15.01□□□□□ -0.01
SSBP3-210ENST00000525990 TEKT1Q969V4 418 aa15.01□□□□□ -0.01
SSBP3-210ENST00000525990 WNK4Q96J92 1243 aa15.01□□□□□ -0.01
SSBP3-210ENST00000525990 PPP1R12BO60237 982 aaPredicted RBP15□□□□□ -0.01
SSBP3-210ENST00000525990 GNAI3P08754 354 aa15□□□□□ -0.01
SSBP3-210ENST00000525990 TIMM10P62072 90 aa15□□□□□ -0.01
SSBP3-210ENST00000525990 TFCP2Q12800 502 aa15□□□□□ -0.01
SSBP3-210ENST00000525990 SUPT20HL1Q3ZLR7 823 aa15□□□□□ -0.01
SSBP3-210ENST00000525990 CNKSR2Q8WXI2 1034 aa15□□□□□ -0.01
SSBP3-210ENST00000525990 SLC10A4Q96EP9 437 aa15□□□□□ -0.01
SSBP3-210ENST00000525990 ZDHHC15Q96MV8 337 aa15□□□□□ -0.01
SSBP3-210ENST00000525990 FBXO3Q9UK99 471 aa15□□□□□ -0.01
SSBP3-210ENST00000525990 ZSWIM8A7E2V4 1837 aa14.99□□□□□ -0.01
SSBP3-210ENST00000525990 HDLBPQ00341 1268 aaKnown RBP14.99□□□□□ -0.01
SSBP3-210ENST00000525990 MTX1Q13505 466 aa14.99□□□□□ -0.01
SSBP3-210ENST00000525990 TNFAIP1Q13829 316 aa14.99□□□□□ -0.01
SSBP3-210ENST00000525990 ELP3Q9H9T3 547 aa14.99□□□□□ -0.01
SSBP3-210ENST00000525990 IGF2BP3O00425 579 aaKnown RBP eCLIP14.98□□□□□ -0.01
SSBP3-210ENST00000525990 IPO8O15397 1037 aaKnown RBP14.98□□□□□ -0.01
SSBP3-210ENST00000525990 RLBP1P12271 317 aa14.98□□□□□ -0.01
SSBP3-210ENST00000525990 IREB2P48200 963 aaKnown RBP14.98□□□□□ -0.01
SSBP3-210ENST00000525990 CCDC102BQ68D86 513 aa14.98□□□□□ -0.01
SSBP3-210ENST00000525990 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.98□□□□□ -0.01
SSBP3-210ENST00000525990 REM2Q8IYK8 340 aaPredicted RBP14.98□□□□□ -0.01
SSBP3-210ENST00000525990 WDR66Q8TBY9 1149 aa14.98□□□□□ -0.01
SSBP3-210ENST00000525990 ZNF296Q8WUU4 475 aaPredicted RBP14.98□□□□□ -0.01
SSBP3-210ENST00000525990 C1orf115Q9H7X2 142 aa14.98□□□□□ -0.01
SSBP3-210ENST00000525990 DAGLAQ9Y4D2 1042 aa14.98□□□□□ -0.01
SSBP3-210ENST00000525990 MAST3O60307 1309 aa14.97□□□□□ -0.01
SSBP3-210ENST00000525990 A0A1B0GUL7 405 aa14.97□□□□□ -0.01
SSBP3-210ENST00000525990 GNAI2P04899 355 aa14.97□□□□□ -0.01
SSBP3-210ENST00000525990 SREBF2Q12772 1141 aa14.97□□□□□ -0.01
SSBP3-210ENST00000525990 RASGRF1Q13972 1273 aa14.97□□□□□ -0.01
SSBP3-210ENST00000525990 ZKSCAN2Q63HK3 967 aa14.97□□□□□ -0.01
SSBP3-210ENST00000525990 HHIPL2Q6UWX4 724 aa14.97□□□□□ -0.01
SSBP3-210ENST00000525990 ANKRD13AQ8IZ07 590 aa14.97□□□□□ -0.01
SSBP3-210ENST00000525990 OPTNQ96CV9 577 aa14.97□□□□□ -0.01
SSBP3-210ENST00000525990 SUGT1Q9Y2Z0 365 aa14.97□□□□□ -0.01
SSBP3-210ENST00000525990 CDK5RAP2Q96SN8 1893 aa14.97□□□□□ -0.01
SSBP3-210ENST00000525990 GPR25O00155 361 aa14.96□□□□□ -0.01
SSBP3-210ENST00000525990 ZBTB48P10074 688 aaPredicted RBP14.96□□□□□ -0.01
SSBP3-210ENST00000525990 TNNI2P48788 182 aa14.96□□□□□ -0.01
SSBP3-210ENST00000525990 NFIAQ12857 509 aa14.96□□□□□ -0.01
SSBP3-210ENST00000525990 VGLL4Q14135 290 aa14.96□□□□□ -0.01
SSBP3-210ENST00000525990 PI16Q6UXB8 463 aa14.96□□□□□ -0.01
SSBP3-210ENST00000525990 IFNL1Q8IU54 200 aa14.96□□□□□ -0.01
SSBP3-210ENST00000525990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.96□□□□□ -0.01
SSBP3-210ENST00000525990 XAGE2Q96GT9 111 aa14.96□□□□□ -0.01
SSBP3-210ENST00000525990 HDAC5Q9UQL6 1122 aa14.96□□□□□ -0.01
SSBP3-210ENST00000525990 MANSC4A6NHS7 340 aaPredicted RBP14.95□□□□□ -0.02
SSBP3-210ENST00000525990 LDHBP07195 334 aaKnown RBP14.95□□□□□ -0.02
SSBP3-210ENST00000525990 TCP10Q12799 353 aa14.95□□□□□ -0.02
SSBP3-210ENST00000525990 CDC42EP5Q6NZY7 148 aa14.95□□□□□ -0.02
SSBP3-210ENST00000525990 PTPN18Q99952 460 aa14.95□□□□□ -0.02
SSBP3-210ENST00000525990 MRIQ9BWK5 157 aa14.95□□□□□ -0.02
SSBP3-210ENST00000525990 MAST2Q6P0Q8 1798 aa14.95□□□□□ -0.02
SSBP3-210ENST00000525990 ZBED9Q6R2W3 1325 aa14.94□□□□□ -0.02
SSBP3-210ENST00000525990 SALL1Q9NSC2 1324 aa14.94□□□□□ -0.02
SSBP3-210ENST00000525990 CTU1Q7Z7A3 348 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms