RNA–Protein interactions for RNA: ENST00000525653.1

HHLA3-206, Transcript of HERV-H LTR-associating 3, humanhuman

TSL 3

Gene HHLA3, Length 689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-206ENST00000525653 OTOFQ9HC10 1997 aa11.17□□□□□ -0.62
HHLA3-206ENST00000525653 KIAA0100Q14667 2235 aaKnown RBP11.16□□□□□ -0.62
HHLA3-206ENST00000525653 CLRN2A0PK11 232 aa11.16□□□□□ -0.62
HHLA3-206ENST00000525653 FKTNO75072 461 aa11.16□□□□□ -0.62
HHLA3-206ENST00000525653 GYG1P46976 350 aa11.16□□□□□ -0.62
HHLA3-206ENST00000525653 PRKG1Q13976 671 aa11.16□□□□□ -0.62
HHLA3-206ENST00000525653 METTL24Q5JXM2 366 aa11.16□□□□□ -0.62
HHLA3-206ENST00000525653 FBXO33Q7Z6M2 555 aa11.16□□□□□ -0.62
HHLA3-206ENST00000525653 ZNF296Q8WUU4 475 aaPredicted RBP11.16□□□□□ -0.62
HHLA3-206ENST00000525653 WNK4Q96J92 1243 aa11.16□□□□□ -0.62
HHLA3-206ENST00000525653 MRIQ9BWK5 157 aa11.16□□□□□ -0.62
HHLA3-206ENST00000525653 BICC1Q9H694 974 aaKnown RBP11.16□□□□□ -0.62
HHLA3-206ENST00000525653 SSC5DA1L4H1 1573 aa11.16□□□□□ -0.62
HHLA3-206ENST00000525653 FRAT2O75474 233 aaPredicted RBP11.15□□□□□ -0.62
HHLA3-206ENST00000525653 PDE8BO95263 885 aa11.15□□□□□ -0.62
HHLA3-206ENST00000525653 TBC1D8O95759 1140 aa11.15□□□□□ -0.62
HHLA3-206ENST00000525653 IFIT1P09914 478 aaKnown RBP11.15□□□□□ -0.62
HHLA3-206ENST00000525653 RASA3Q14644 834 aa11.15□□□□□ -0.62
HHLA3-206ENST00000525653 FBXO46Q6PJ61 603 aaPredicted RBP11.15□□□□□ -0.62
HHLA3-206ENST00000525653 DZIP1LQ8IYY4 767 aaKnown RBP11.15□□□□□ -0.62
HHLA3-206ENST00000525653 ANKRD44Q8N8A2 993 aa11.15□□□□□ -0.62
HHLA3-206ENST00000525653 HOOK2Q96ED9 719 aa11.15□□□□□ -0.62
HHLA3-206ENST00000525653 PUS3Q9BZE2 481 aaKnown RBP11.15□□□□□ -0.62
HHLA3-206ENST00000525653 ZNF70Q9UC06 446 aaPredicted RBP11.15□□□□□ -0.62
HHLA3-206ENST00000525653 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
HHLA3-206ENST00000525653 AK9Q5TCS8 1911 aa11.15□□□□□ -0.62
HHLA3-206ENST00000525653 CRKP46108 304 aa11.14□□□□□ -0.63
HHLA3-206ENST00000525653 SLFN5Q08AF3 891 aa11.14□□□□□ -0.63
HHLA3-206ENST00000525653 MKRN3Q13064 507 aaKnown RBP11.14□□□□□ -0.63
HHLA3-206ENST00000525653 PUM3Q15397 648 aaKnown RBP11.14□□□□□ -0.63
HHLA3-206ENST00000525653 NBPF12Q5TAG4 269 aaPredicted RBP11.14□□□□□ -0.63
HHLA3-206ENST00000525653 IFNL1Q8IU54 200 aa11.14□□□□□ -0.63
HHLA3-206ENST00000525653 VGLL2Q8N8G2 317 aa11.14□□□□□ -0.63
HHLA3-206ENST00000525653 SSH1Q8WYL5 1049 aa11.14□□□□□ -0.63
HHLA3-206ENST00000525653 TEKT1Q969V4 418 aa11.14□□□□□ -0.63
HHLA3-206ENST00000525653 USP44Q9H0E7 712 aa11.14□□□□□ -0.63
HHLA3-206ENST00000525653 TMOD2Q9NZR1 351 aa11.14□□□□□ -0.63
HHLA3-206ENST00000525653 HPS5Q9UPZ3 1129 aa11.14□□□□□ -0.63
HHLA3-206ENST00000525653 USP2O75604 605 aaPredicted RBP11.13□□□□□ -0.63
HHLA3-206ENST00000525653 FKBP1CQ5VVH2 108 aa11.13□□□□□ -0.63
HHLA3-206ENST00000525653 JAG2Q9Y219 1238 aa11.13□□□□□ -0.63
HHLA3-206ENST00000525653 PCDHAC2Q9Y5I4 1007 aa11.13□□□□□ -0.63
HHLA3-206ENST00000525653 RPAP1Q9BWH6 1393 aaPredicted RBP11.13□□□□□ -0.63
HHLA3-206ENST00000525653 TESPA1A2RU30 521 aaPredicted RBP11.12□□□□□ -0.63
HHLA3-206ENST00000525653 EYA2O00167 538 aa11.12□□□□□ -0.63
HHLA3-206ENST00000525653 SLC5A1P13866 664 aa11.12□□□□□ -0.63
HHLA3-206ENST00000525653 LRRC24Q50LG9 513 aa11.12□□□□□ -0.63
HHLA3-206ENST00000525653 HHIPL2Q6UWX4 724 aa11.12□□□□□ -0.63
HHLA3-206ENST00000525653 FAM83AQ86UY5 434 aa11.12□□□□□ -0.63
HHLA3-206ENST00000525653 WDR66Q8TBY9 1149 aa11.12□□□□□ -0.63
HHLA3-206ENST00000525653 LPIN2Q92539 896 aa11.12□□□□□ -0.63
HHLA3-206ENST00000525653 ERO1AQ96HE7 468 aa11.12□□□□□ -0.63
HHLA3-206ENST00000525653 CLMNQ96JQ2 1002 aa11.12□□□□□ -0.63
HHLA3-206ENST00000525653 ZDHHC15Q96MV8 337 aa11.12□□□□□ -0.63
HHLA3-206ENST00000525653 TDRD3Q9H7E2 651 aaKnown RBP11.12□□□□□ -0.63
HHLA3-206ENST00000525653 SMC4Q9NTJ3 1288 aa11.12□□□□□ -0.63
HHLA3-206ENST00000525653 CSADQ9Y600 493 aa11.12□□□□□ -0.63
HHLA3-206ENST00000525653 RBBP6Q7Z6E9 1792 aaKnown RBP11.11□□□□□ -0.63
HHLA3-206ENST00000525653 WDHD1O75717 1129 aaPredicted RBP11.11□□□□□ -0.63
HHLA3-206ENST00000525653 UBTFL1P0CB47 393 aaPredicted RBP11.11□□□□□ -0.63
HHLA3-206ENST00000525653 FGFR2P21802 821 aa11.11□□□□□ -0.63
HHLA3-206ENST00000525653 CHAF1AQ13111 956 aaPredicted RBP11.11□□□□□ -0.63
HHLA3-206ENST00000525653 ARHGEF6Q15052 776 aa11.11□□□□□ -0.63
HHLA3-206ENST00000525653 TEPSINQ96N21 525 aa11.11□□□□□ -0.63
HHLA3-206ENST00000525653 API5Q9BZZ5 524 aaKnown RBP11.11□□□□□ -0.63
HHLA3-206ENST00000525653 SSUH2Q9Y2M2 353 aa11.11□□□□□ -0.63
HHLA3-206ENST00000525653 TCP10L2B9ZVM9 353 aa11.1□□□□□ -0.63
HHLA3-206ENST00000525653 IGF2BP3O00425 579 aaKnown RBP eCLIP11.1□□□□□ -0.63
HHLA3-206ENST00000525653 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
HHLA3-206ENST00000525653 CIAO1O76071 339 aa11.1□□□□□ -0.63
HHLA3-206ENST00000525653 GTF2A2P52657 109 aa11.1□□□□□ -0.63
HHLA3-206ENST00000525653 SOX10P56693 466 aa11.1□□□□□ -0.63
HHLA3-206ENST00000525653 MAP3K9P80192 1104 aa11.1□□□□□ -0.63
HHLA3-206ENST00000525653 DCAF15Q66K64 600 aa11.1□□□□□ -0.63
HHLA3-206ENST00000525653 INTS3Q68E01 1043 aaKnown RBP11.1□□□□□ -0.63
HHLA3-206ENST00000525653 TRMT2AQ8IZ69 625 aaKnown RBP11.1□□□□□ -0.63
HHLA3-206ENST00000525653 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.1□□□□□ -0.63
HHLA3-206ENST00000525653 OPTNQ96CV9 577 aa11.1□□□□□ -0.63
HHLA3-206ENST00000525653 ZCCHC17Q9NP64 241 aaKnown RBP11.1□□□□□ -0.63
HHLA3-206ENST00000525653 GNL3LQ9NVN8 582 aaKnown RBP11.1□□□□□ -0.63
HHLA3-206ENST00000525653 FZD1Q9UP38 647 aa11.1□□□□□ -0.63
HHLA3-206ENST00000525653 AOX1Q06278 1338 aa11.09□□□□□ -0.63
HHLA3-206ENST00000525653 MYH2Q9UKX2 1941 aa11.09□□□□□ -0.63
HHLA3-206ENST00000525653 SEMA3EO15041 775 aa11.09□□□□□ -0.63
HHLA3-206ENST00000525653 RFX5P48382 616 aaPredicted RBP11.09□□□□□ -0.63
HHLA3-206ENST00000525653 BCAMP50895 628 aa11.09□□□□□ -0.63
HHLA3-206ENST00000525653 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.09□□□□□ -0.63
HHLA3-206ENST00000525653 TMEM39BQ9GZU3 492 aa11.09□□□□□ -0.63
HHLA3-206ENST00000525653 CEP126Q9P2H0 1117 aa11.09□□□□□ -0.63
HHLA3-206ENST00000525653 IQSEC3Q9UPP2 1182 aaPredicted RBP11.09□□□□□ -0.63
HHLA3-206ENST00000525653 TRIM17Q9Y577 477 aa11.09□□□□□ -0.63
HHLA3-206ENST00000525653 CCER2I3L3R5 266 aa11.08□□□□□ -0.64
HHLA3-206ENST00000525653 SLC34A2O95436 690 aa11.08□□□□□ -0.64
HHLA3-206ENST00000525653 GJA5P36382 358 aa11.08□□□□□ -0.64
HHLA3-206ENST00000525653 IL15P40933 162 aaPredicted RBP11.08□□□□□ -0.64
HHLA3-206ENST00000525653 SP3Q02447 781 aa11.08□□□□□ -0.64
HHLA3-206ENST00000525653 CRHR2Q13324 411 aa11.08□□□□□ -0.64
HHLA3-206ENST00000525653 ERO1BQ86YB8 467 aa11.08□□□□□ -0.64
HHLA3-206ENST00000525653 ZGPATQ8N5A5 531 aaKnown RBP11.08□□□□□ -0.64
HHLA3-206ENST00000525653 KLHDC4Q8TBB5 520 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms