RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 TTLL12Q14166 644 aaPredicted RBP15.64■□□□□ 0.09
SMCO4-202ENST00000525141 RASA3Q14644 834 aa15.64■□□□□ 0.09
SMCO4-202ENST00000525141 MAP3K11Q16584 847 aa15.64■□□□□ 0.09
SMCO4-202ENST00000525141 SPDYE2Q495Y8 402 aa15.64■□□□□ 0.09
SMCO4-202ENST00000525141 ATF7IPQ6VMQ6 1270 aa15.64■□□□□ 0.09
SMCO4-202ENST00000525141 VPS37DQ86XT2 251 aa15.64■□□□□ 0.09
SMCO4-202ENST00000525141 CDAN1Q8IWY9 1227 aa15.64■□□□□ 0.09
SMCO4-202ENST00000525141 LPIN2Q92539 896 aa15.64■□□□□ 0.09
SMCO4-202ENST00000525141 TEPSINQ96N21 525 aa15.64■□□□□ 0.09
SMCO4-202ENST00000525141 FBXO3Q9UK99 471 aa15.64■□□□□ 0.09
SMCO4-202ENST00000525141 ANGEL1Q9UNK9 670 aaKnown RBP15.64■□□□□ 0.09
SMCO4-202ENST00000525141 SSC5DA1L4H1 1573 aa15.63■□□□□ 0.09
SMCO4-202ENST00000525141 IFIT1P09914 478 aaKnown RBP15.63■□□□□ 0.09
SMCO4-202ENST00000525141 NF2P35240 595 aa15.63■□□□□ 0.09
SMCO4-202ENST00000525141 ARMC9Q7Z3E5 817 aa15.63■□□□□ 0.09
SMCO4-202ENST00000525141 FRAT1Q92837 279 aaPredicted RBP15.63■□□□□ 0.09
SMCO4-202ENST00000525141 CLUAP1Q96AJ1 413 aa15.63■□□□□ 0.09
SMCO4-202ENST00000525141 YTHDC1Q96MU7 727 aaKnown RBP15.63■□□□□ 0.09
SMCO4-202ENST00000525141 VEZTQ9HBM0 779 aa15.63■□□□□ 0.09
SMCO4-202ENST00000525141 CEP126Q9P2H0 1117 aa15.63■□□□□ 0.09
SMCO4-202ENST00000525141 IL15P40933 162 aaPredicted RBP15.62■□□□□ 0.09
SMCO4-202ENST00000525141 TIMM10P62072 90 aa15.62■□□□□ 0.09
SMCO4-202ENST00000525141 HDLBPQ00341 1268 aaKnown RBP15.62■□□□□ 0.09
SMCO4-202ENST00000525141 MKRN3Q13064 507 aaKnown RBP15.62■□□□□ 0.09
SMCO4-202ENST00000525141 MTX1Q13505 466 aa15.62■□□□□ 0.09
SMCO4-202ENST00000525141 APOBEC3HQ6NTF7 200 aaKnown RBP15.62■□□□□ 0.09
SMCO4-202ENST00000525141 TBC1D22AQ8WUA7 517 aa15.62■□□□□ 0.09
SMCO4-202ENST00000525141 ABHD8Q96I13 439 aa15.62■□□□□ 0.09
SMCO4-202ENST00000525141 CLMNQ96JQ2 1002 aa15.62■□□□□ 0.09
SMCO4-202ENST00000525141 SAGE1Q9NXZ1 904 aa15.62■□□□□ 0.09
SMCO4-202ENST00000525141 PPP2R3BQ9Y5P8 575 aa15.62■□□□□ 0.09
SMCO4-202ENST00000525141 ECM29Q5VYK3 1845 aa15.61■□□□□ 0.09
SMCO4-202ENST00000525141 AKAP11Q9UKA4 1901 aa15.61■□□□□ 0.09
SMCO4-202ENST00000525141 MYO1BO43795 1136 aa15.61■□□□□ 0.09
SMCO4-202ENST00000525141 FRAT2O75474 233 aaPredicted RBP15.61■□□□□ 0.09
SMCO4-202ENST00000525141 GNAI3P08754 354 aa15.61■□□□□ 0.09
SMCO4-202ENST00000525141 SLC5A1P13866 664 aa15.61■□□□□ 0.09
SMCO4-202ENST00000525141 ADORA1P30542 326 aa15.61■□□□□ 0.09
SMCO4-202ENST00000525141 SPRYD7Q5W111 196 aa15.61■□□□□ 0.09
SMCO4-202ENST00000525141 ZKSCAN2Q63HK3 967 aa15.61■□□□□ 0.09
SMCO4-202ENST00000525141 REM2Q8IYK8 340 aaPredicted RBP15.61■□□□□ 0.09
SMCO4-202ENST00000525141 TCP10L2B9ZVM9 353 aa15.6■□□□□ 0.09
SMCO4-202ENST00000525141 PHKA1P46020 1223 aa15.6■□□□□ 0.09
SMCO4-202ENST00000525141 CACNB3P54284 484 aa15.6■□□□□ 0.09
SMCO4-202ENST00000525141 ATP2B3Q16720 1220 aa15.6■□□□□ 0.09
SMCO4-202ENST00000525141 SUPT20HL1Q3ZLR7 823 aa15.6■□□□□ 0.09
SMCO4-202ENST00000525141 TMEM57Q8N5G2 664 aa15.6■□□□□ 0.09
SMCO4-202ENST00000525141 SLC10A4Q96EP9 437 aa15.6■□□□□ 0.09
SMCO4-202ENST00000525141 ZDHHC15Q96MV8 337 aa15.6■□□□□ 0.09
SMCO4-202ENST00000525141 MCOLN1Q9GZU1 580 aa15.6■□□□□ 0.09
SMCO4-202ENST00000525141 R3HDMLQ9H3Y0 253 aa15.6■□□□□ 0.09
SMCO4-202ENST00000525141 RCAN3Q9UKA8 241 aa15.6■□□□□ 0.09
SMCO4-202ENST00000525141 HDAC5Q9UQL6 1122 aa15.6■□□□□ 0.09
SMCO4-202ENST00000525141 COL1A1P02452 1464 aaPredicted RBP15.59■□□□□ 0.09
SMCO4-202ENST00000525141 PNMA6EA0A0J9YXQ4 647 aa15.59■□□□□ 0.09
SMCO4-202ENST00000525141 SRGAP3O43295 1099 aa15.59■□□□□ 0.09
SMCO4-202ENST00000525141 ABCB7O75027 752 aa15.59■□□□□ 0.09
SMCO4-202ENST00000525141 TBC1D8O95759 1140 aa15.59■□□□□ 0.09
SMCO4-202ENST00000525141 GJA5P36382 358 aa15.59■□□□□ 0.09
SMCO4-202ENST00000525141 TFCP2Q12800 502 aa15.59■□□□□ 0.09
SMCO4-202ENST00000525141 SAMD1Q6SPF0 538 aaPredicted RBP15.59■□□□□ 0.09
SMCO4-202ENST00000525141 TMEM39BQ9GZU3 492 aa15.59■□□□□ 0.09
SMCO4-202ENST00000525141 SUGT1Q9Y2Z0 365 aa15.59■□□□□ 0.09
SMCO4-202ENST00000525141 ZBTB22O15209 634 aa15.58■□□□□ 0.08
SMCO4-202ENST00000525141 PPP1R12BO60237 982 aaPredicted RBP15.58■□□□□ 0.08
SMCO4-202ENST00000525141 HHIPL2Q6UWX4 724 aa15.58■□□□□ 0.08
SMCO4-202ENST00000525141 WDR66Q8TBY9 1149 aa15.58■□□□□ 0.08
SMCO4-202ENST00000525141 TEKT1Q969V4 418 aa15.58■□□□□ 0.08
SMCO4-202ENST00000525141 UNCXA6NJT0 531 aa15.57■□□□□ 0.08
SMCO4-202ENST00000525141 GNAI2P04899 355 aa15.57■□□□□ 0.08
SMCO4-202ENST00000525141 RLBP1P12271 317 aa15.57■□□□□ 0.08
SMCO4-202ENST00000525141 CCDC102BQ68D86 513 aa15.57■□□□□ 0.08
SMCO4-202ENST00000525141 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.57■□□□□ 0.08
SMCO4-202ENST00000525141 ZBTB7BO15156 539 aaPredicted RBP15.56■□□□□ 0.08
SMCO4-202ENST00000525141 PRDX5P30044 214 aa15.56■□□□□ 0.08
SMCO4-202ENST00000525141 DGKZQ13574 1117 aa15.56■□□□□ 0.08
SMCO4-202ENST00000525141 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.56■□□□□ 0.08
SMCO4-202ENST00000525141 WNK4Q96J92 1243 aa15.56■□□□□ 0.08
SMCO4-202ENST00000525141 ARAP2Q8WZ64 1704 aa15.55■□□□□ 0.08
SMCO4-202ENST00000525141 MS4A1P11836 297 aa15.55■□□□□ 0.08
SMCO4-202ENST00000525141 ATP8B2P98198 1209 aa15.55■□□□□ 0.08
SMCO4-202ENST00000525141 POLA2Q14181 598 aa15.55■□□□□ 0.08
SMCO4-202ENST00000525141 DIXDC1Q155Q3 683 aa15.55■□□□□ 0.08
SMCO4-202ENST00000525141 XAGE2Q96GT9 111 aa15.55■□□□□ 0.08
SMCO4-202ENST00000525141 PTPN18Q99952 460 aa15.55■□□□□ 0.08
SMCO4-202ENST00000525141 DAGLAQ9Y4D2 1042 aa15.55■□□□□ 0.08
SMCO4-202ENST00000525141 SALL1Q9NSC2 1324 aa15.54■□□□□ 0.08
SMCO4-202ENST00000525141 A0A1B0GUL7 405 aa15.54■□□□□ 0.08
SMCO4-202ENST00000525141 IREB2P48200 963 aaKnown RBP15.54■□□□□ 0.08
SMCO4-202ENST00000525141 TNFAIP1Q13829 316 aa15.54■□□□□ 0.08
SMCO4-202ENST00000525141 FKBP1CQ5VVH2 108 aa15.54■□□□□ 0.08
SMCO4-202ENST00000525141 CDC42EP5Q6NZY7 148 aa15.54■□□□□ 0.08
SMCO4-202ENST00000525141 ANKRD13AQ8IZ07 590 aa15.54■□□□□ 0.08
SMCO4-202ENST00000525141 GNL3LQ9NVN8 582 aaKnown RBP15.54■□□□□ 0.08
SMCO4-202ENST00000525141 DENND2AQ9ULE3 1009 aa15.54■□□□□ 0.08
SMCO4-202ENST00000525141 TESPA1A2RU30 521 aaPredicted RBP15.53■□□□□ 0.08
SMCO4-202ENST00000525141 IGF2BP3O00425 579 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMCO4-202ENST00000525141 SEMA3EO15041 775 aa15.53■□□□□ 0.08
SMCO4-202ENST00000525141 ZBTB48P10074 688 aaPredicted RBP15.53■□□□□ 0.08
SMCO4-202ENST00000525141 MAP3K9P80192 1104 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms