RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 DPYDQ12882 1025 aa9.29□□□□□ -0.92
CASP4-205ENST00000525116 CC2D1BQ5T0F9 858 aaKnown RBP9.29□□□□□ -0.92
CASP4-205ENST00000525116 NPM2Q86SE8 214 aaKnown RBP9.29□□□□□ -0.92
CASP4-205ENST00000525116 ZNF496Q96IT1 587 aaPredicted RBP9.29□□□□□ -0.92
CASP4-205ENST00000525116 SETDB2Q96T68 719 aa9.29□□□□□ -0.92
CASP4-205ENST00000525116 VIRMAQ69YN4 1812 aaKnown RBP9.28□□□□□ -0.92
CASP4-205ENST00000525116 A1BGP04217 495 aa9.28□□□□□ -0.92
CASP4-205ENST00000525116 CLDN10P78369 228 aa9.28□□□□□ -0.92
CASP4-205ENST00000525116 IL17REQ8NFR9 667 aa9.28□□□□□ -0.92
CASP4-205ENST00000525116 GZF1Q9H116 711 aaPredicted RBP9.28□□□□□ -0.92
CASP4-205ENST00000525116 TAOK3Q9H2K8 898 aa9.28□□□□□ -0.92
CASP4-205ENST00000525116 ANKRD31Q8N7Z5 1873 aa9.28□□□□□ -0.92
CASP4-205ENST00000525116 GNAT3A8MTJ3 354 aa9.27□□□□□ -0.93
CASP4-205ENST00000525116 IL6STP40189 918 aaPredicted RBP9.27□□□□□ -0.93
CASP4-205ENST00000525116 PIP4K2AP48426 406 aaPredicted RBP9.27□□□□□ -0.93
CASP4-205ENST00000525116 SEC13P55735 322 aa9.27□□□□□ -0.93
CASP4-205ENST00000525116 ST5P78524 1137 aa9.27□□□□□ -0.93
CASP4-205ENST00000525116 DHX9Q08211 1270 aaKnown RBP9.27□□□□□ -0.93
CASP4-205ENST00000525116 SWI5Q1ZZU3 235 aa9.27□□□□□ -0.93
CASP4-205ENST00000525116 INTS6LQ5JSJ4 861 aaKnown RBP9.27□□□□□ -0.93
CASP4-205ENST00000525116 PRPF40BQ6NWY9 871 aaKnown RBP9.27□□□□□ -0.93
CASP4-205ENST00000525116 ZNF790Q6PG37 636 aa9.27□□□□□ -0.93
CASP4-205ENST00000525116 SIX5Q8N196 739 aa9.27□□□□□ -0.93
CASP4-205ENST00000525116 CNBD1Q8NA66 436 aa9.27□□□□□ -0.93
CASP4-205ENST00000525116 CNKSR1Q969H4 720 aa9.27□□□□□ -0.93
CASP4-205ENST00000525116 TEX13AQ9BXU3 409 aaPredicted RBP9.27□□□□□ -0.93
CASP4-205ENST00000525116 PDZRN3Q9UPQ7 1066 aa9.27□□□□□ -0.93
CASP4-205ENST00000525116 HEG1Q9ULI3 1381 aa9.26□□□□□ -0.93
CASP4-205ENST00000525116 COL11A2P13942 1736 aaPredicted RBP9.26□□□□□ -0.93
CASP4-205ENST00000525116 FOXN1O15353 648 aa9.26□□□□□ -0.93
CASP4-205ENST00000525116 KCNQ3O43525 872 aa9.26□□□□□ -0.93
CASP4-205ENST00000525116 SRGNP10124 158 aa9.26□□□□□ -0.93
CASP4-205ENST00000525116 FSHRP23945 695 aa9.26□□□□□ -0.93
CASP4-205ENST00000525116 EAPPQ56P03 285 aaPredicted RBP9.26□□□□□ -0.93
CASP4-205ENST00000525116 TMCO4Q5TGY1 634 aa9.26□□□□□ -0.93
CASP4-205ENST00000525116 CCDC102BQ68D86 513 aa9.26□□□□□ -0.93
CASP4-205ENST00000525116 STYK1Q6J9G0 422 aa9.26□□□□□ -0.93
CASP4-205ENST00000525116 TPCN2Q8NHX9 752 aa9.26□□□□□ -0.93
CASP4-205ENST00000525116 FMNL2Q96PY5 1086 aa9.26□□□□□ -0.93
CASP4-205ENST00000525116 CDK15Q96Q40 435 aa9.26□□□□□ -0.93
CASP4-205ENST00000525116 UBR2Q8IWV8 1755 aa9.26□□□□□ -0.93
CASP4-205ENST00000525116 FAM177BA6PVY3 158 aa9.25□□□□□ -0.93
CASP4-205ENST00000525116 BTBD11A6QL63 1104 aa9.25□□□□□ -0.93
CASP4-205ENST00000525116 CAMTA2O94983 1202 aa9.25□□□□□ -0.93
CASP4-205ENST00000525116 NBPF5PQ86XG9 351 aaPredicted RBP9.25□□□□□ -0.93
CASP4-205ENST00000525116 CLP1Q92989 425 aaKnown RBP9.25□□□□□ -0.93
CASP4-205ENST00000525116 MASTLQ96GX5 879 aa9.25□□□□□ -0.93
CASP4-205ENST00000525116 SLX4Q8IY92 1834 aa9.25□□□□□ -0.93
CASP4-205ENST00000525116 CACNA1SQ13698 1873 aa9.25□□□□□ -0.93
CASP4-205ENST00000525116 FER1L6Q2WGJ9 1857 aa9.25□□□□□ -0.93
CASP4-205ENST00000525116 LTBP3Q9NS15 1303 aa9.25□□□□□ -0.93
CASP4-205ENST00000525116 DICER1Q9UPY3 1922 aaKnown RBP9.25□□□□□ -0.93
CASP4-205ENST00000525116 IQCA1LA6NCM1 817 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 SLC19A1P41440 591 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 SOGA3Q5TF21 947 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 OLFM4Q6UX06 510 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 LIAT1Q6ZQX7 453 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 LDHDQ86WU2 507 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 MPNDQ8N594 471 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 GAS2L2Q8NHY3 880 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 AIDAQ96BJ3 306 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 TAF1DQ9H5J8 278 aaPredicted RBP9.24□□□□□ -0.93
CASP4-205ENST00000525116 ZNF277Q9NRM2 450 aaPredicted RBP9.24□□□□□ -0.93
CASP4-205ENST00000525116 KIAA1024Q9UPX6 916 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 USP16Q9Y5T5 823 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 TLL2Q9Y6L7 1015 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 IVNS1ABPQ9Y6Y0 642 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 KIF7Q2M1P5 1343 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 CLSPNQ9HAW4 1339 aa9.24□□□□□ -0.93
CASP4-205ENST00000525116 SCN7AQ01118 1682 aa9.23□□□□□ -0.93
CASP4-205ENST00000525116 PRAMEF22A3QJZ6 481 aa9.23□□□□□ -0.93
CASP4-205ENST00000525116 VEGFBP49765 207 aa9.23□□□□□ -0.93
CASP4-205ENST00000525116 CCDC93Q567U6 631 aa9.23□□□□□ -0.93
CASP4-205ENST00000525116 CCER1Q8TC90 406 aaPredicted RBP9.23□□□□□ -0.93
CASP4-205ENST00000525116 PHACTR3Q96KR7 559 aa9.23□□□□□ -0.93
CASP4-205ENST00000525116 PCDHGA11Q9Y5H2 935 aa9.23□□□□□ -0.93
CASP4-205ENST00000525116 PASKQ96RG2 1323 aa9.23□□□□□ -0.93
CASP4-205ENST00000525116 ZNF541Q9H0D2 1346 aa9.23□□□□□ -0.93
CASP4-205ENST00000525116 CNTNAP1P78357 1384 aa9.23□□□□□ -0.93
CASP4-205ENST00000525116 WNT7AO00755 349 aa9.22□□□□□ -0.93
CASP4-205ENST00000525116 ZBTB7BO15156 539 aaPredicted RBP9.22□□□□□ -0.93
CASP4-205ENST00000525116 ADH1CP00326 375 aa9.22□□□□□ -0.93
CASP4-205ENST00000525116 NPR1P16066 1061 aa9.22□□□□□ -0.93
CASP4-205ENST00000525116 ATP2B4P23634 1241 aa9.22□□□□□ -0.93
CASP4-205ENST00000525116 CTCFP49711 727 aaPredicted RBP9.22□□□□□ -0.93
CASP4-205ENST00000525116 MMRN1Q13201 1228 aa9.22□□□□□ -0.93
CASP4-205ENST00000525116 CC2D2BQ6DHV5 1058 aa9.22□□□□□ -0.93
CASP4-205ENST00000525116 C7orf43Q8WVR3 580 aa9.22□□□□□ -0.93
CASP4-205ENST00000525116 HACL1Q9UJ83 578 aa9.22□□□□□ -0.93
CASP4-205ENST00000525116 NIP7Q9Y221 180 aaKnown RBP eCLIP9.22□□□□□ -0.93
CASP4-205ENST00000525116 GTF2E1P29083 439 aaPredicted RBP9.21□□□□□ -0.94
CASP4-205ENST00000525116 PRKAR2BP31323 418 aa9.21□□□□□ -0.94
CASP4-205ENST00000525116 EPHX2P34913 555 aa9.21□□□□□ -0.94
CASP4-205ENST00000525116 LBX1P52954 281 aa9.21□□□□□ -0.94
CASP4-205ENST00000525116 ERVK-9P63128 1117 aa9.21□□□□□ -0.94
CASP4-205ENST00000525116 FKBP4Q02790 459 aaKnown RBP eCLIP9.21□□□□□ -0.94
CASP4-205ENST00000525116 NR5A1Q13285 461 aa9.21□□□□□ -0.94
CASP4-205ENST00000525116 MAP1SQ66K74 1059 aaPredicted RBP9.21□□□□□ -0.94
CASP4-205ENST00000525116 TPTE2Q6XPS3 522 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms