RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 TMEM39BQ9GZU3 492 aa16.12■□□□□ 0.17
SF3B2-203ENST00000524627 SPINK5Q9NQ38 1064 aaPredicted RBP16.12■□□□□ 0.17
SF3B2-203ENST00000524627 KIAA0100Q14667 2235 aaKnown RBP16.12■□□□□ 0.17
SF3B2-203ENST00000524627 ARAP2Q8WZ64 1704 aa16.11■□□□□ 0.17
SF3B2-203ENST00000524627 ALDH1L1O75891 902 aa16.11■□□□□ 0.17
SF3B2-203ENST00000524627 CRKP46108 304 aa16.11■□□□□ 0.17
SF3B2-203ENST00000524627 CAP1Q01518 475 aa16.11■□□□□ 0.17
SF3B2-203ENST00000524627 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.11■□□□□ 0.17
SF3B2-203ENST00000524627 GCC1Q96CN9 775 aa16.11■□□□□ 0.17
SF3B2-203ENST00000524627 SUCLG2Q96I99 432 aa16.11■□□□□ 0.17
SF3B2-203ENST00000524627 MS4A4AQ96JQ5 239 aa16.11■□□□□ 0.17
SF3B2-203ENST00000524627 TEPSINQ96N21 525 aa16.11■□□□□ 0.17
SF3B2-203ENST00000524627 VGLL4Q14135 290 aa16.1■□□□□ 0.17
SF3B2-203ENST00000524627 VPS37DQ86XT2 251 aa16.1■□□□□ 0.17
SF3B2-203ENST00000524627 BRI3BPQ8WY22 251 aa16.1■□□□□ 0.17
SF3B2-203ENST00000524627 SRCIN1Q9C0H9 1055 aa16.1■□□□□ 0.17
SF3B2-203ENST00000524627 IQSEC3Q9UPP2 1182 aaPredicted RBP16.1■□□□□ 0.17
SF3B2-203ENST00000524627 RBBP6Q7Z6E9 1792 aaKnown RBP16.09■□□□□ 0.17
SF3B2-203ENST00000524627 CCL15-CCL14A0A0B4J2E2 113 aa16.09■□□□□ 0.17
SF3B2-203ENST00000524627 EN2P19622 333 aaPredicted RBP16.09■□□□□ 0.17
SF3B2-203ENST00000524627 TNNI2P48788 182 aa16.09■□□□□ 0.17
SF3B2-203ENST00000524627 MAP3K9P80192 1104 aa16.09■□□□□ 0.17
SF3B2-203ENST00000524627 CHAF1AQ13111 956 aaPredicted RBP16.09■□□□□ 0.17
SF3B2-203ENST00000524627 TAF1CQ15572 869 aaPredicted RBP16.09■□□□□ 0.17
SF3B2-203ENST00000524627 GRIK5Q16478 980 aa16.09■□□□□ 0.17
SF3B2-203ENST00000524627 CCL15Q16663 113 aa16.09■□□□□ 0.17
SF3B2-203ENST00000524627 ARMC5Q96C12 935 aa16.09■□□□□ 0.17
SF3B2-203ENST00000524627 KAZALD1Q96I82 304 aa16.09■□□□□ 0.17
SF3B2-203ENST00000524627 RIPOR2Q9Y4F9 1068 aa16.09■□□□□ 0.17
SF3B2-203ENST00000524627 CSADQ9Y600 493 aa16.09■□□□□ 0.17
SF3B2-203ENST00000524627 NBPF7P0C2Y1 421 aaPredicted RBP16.08■□□□□ 0.16
SF3B2-203ENST00000524627 GTF2A2P52657 109 aa16.08■□□□□ 0.16
SF3B2-203ENST00000524627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.08■□□□□ 0.16
SF3B2-203ENST00000524627 OTUD5Q96G74 571 aa16.08■□□□□ 0.16
SF3B2-203ENST00000524627 ZFYVE28Q9HCC9 887 aa16.08■□□□□ 0.16
SF3B2-203ENST00000524627 MROH5Q6ZUA9 1318 aa16.08■□□□□ 0.16
SF3B2-203ENST00000524627 FRAT2O75474 233 aaPredicted RBP16.07■□□□□ 0.16
SF3B2-203ENST00000524627 CACNB3P54284 484 aa16.07■□□□□ 0.16
SF3B2-203ENST00000524627 FBXO33Q7Z6M2 555 aa16.07■□□□□ 0.16
SF3B2-203ENST00000524627 BICC1Q9H694 974 aaKnown RBP16.07■□□□□ 0.16
SF3B2-203ENST00000524627 LRRC24Q50LG9 513 aa16.06■□□□□ 0.16
SF3B2-203ENST00000524627 HABP4Q5JVS0 413 aaKnown RBP16.06■□□□□ 0.16
SF3B2-203ENST00000524627 METTL24Q5JXM2 366 aa16.06■□□□□ 0.16
SF3B2-203ENST00000524627 FAM43AQ8N2R8 423 aa16.06■□□□□ 0.16
SF3B2-203ENST00000524627 TEKT1Q969V4 418 aa16.06■□□□□ 0.16
SF3B2-203ENST00000524627 TMEM106CQ9BVX2 250 aa16.06■□□□□ 0.16
SF3B2-203ENST00000524627 PTCH2Q9Y6C5 1203 aa16.06■□□□□ 0.16
SF3B2-203ENST00000524627 ARHGEF6Q15052 776 aa16.05■□□□□ 0.16
SF3B2-203ENST00000524627 SLC9C1Q4G0N8 1177 aa16.05■□□□□ 0.16
SF3B2-203ENST00000524627 CAVIN4Q5BKX8 364 aa16.05■□□□□ 0.16
SF3B2-203ENST00000524627 TBC1D22AQ8WUA7 517 aa16.05■□□□□ 0.16
SF3B2-203ENST00000524627 ZNF333Q96JL9 665 aa16.05■□□□□ 0.16
SF3B2-203ENST00000524627 UTYO14607 1347 aa16.04■□□□□ 0.16
SF3B2-203ENST00000524627 SPDYE5A6NIY4 337 aa16.04■□□□□ 0.16
SF3B2-203ENST00000524627 ANP32CO43423 234 aa16.04■□□□□ 0.16
SF3B2-203ENST00000524627 HDLBPQ00341 1268 aaKnown RBP16.04■□□□□ 0.16
SF3B2-203ENST00000524627 NBPF11Q86T75 865 aa16.04■□□□□ 0.16
SF3B2-203ENST00000524627 WRNIP1Q96S55 665 aa16.04■□□□□ 0.16
SF3B2-203ENST00000524627 TMOD2Q9NZR1 351 aa16.04■□□□□ 0.16
SF3B2-203ENST00000524627 SNCAIPQ9Y6H5 919 aa16.04■□□□□ 0.16
SF3B2-203ENST00000524627 MYCP01106 439 aaPredicted RBP16.03■□□□□ 0.16
SF3B2-203ENST00000524627 BCAMP50895 628 aa16.03■□□□□ 0.16
SF3B2-203ENST00000524627 SLC4A8Q2Y0W8 1093 aa16.03■□□□□ 0.16
SF3B2-203ENST00000524627 RABL6Q3YEC7 729 aaPredicted RBP16.03■□□□□ 0.16
SF3B2-203ENST00000524627 ERO1BQ86YB8 467 aa16.03■□□□□ 0.16
SF3B2-203ENST00000524627 ANKRD44Q8N8A2 993 aa16.03■□□□□ 0.16
SF3B2-203ENST00000524627 VGLL2Q8N8G2 317 aa16.03■□□□□ 0.16
SF3B2-203ENST00000524627 ZKSCAN4Q969J2 545 aaPredicted RBP16.03■□□□□ 0.16
SF3B2-203ENST00000524627 ZDHHC15Q96MV8 337 aa16.03■□□□□ 0.16
SF3B2-203ENST00000524627 WDHD1O75717 1129 aaPredicted RBP16.02■□□□□ 0.16
SF3B2-203ENST00000524627 PDE8BO95263 885 aa16.02■□□□□ 0.16
SF3B2-203ENST00000524627 CETPP11597 493 aa16.02■□□□□ 0.16
SF3B2-203ENST00000524627 KLHDC4Q8TBB5 520 aa16.02■□□□□ 0.16
SF3B2-203ENST00000524627 ARHGAP39Q9C0H5 1083 aa16.02■□□□□ 0.16
SF3B2-203ENST00000524627 ZSWIM8A7E2V4 1837 aa16.02■□□□□ 0.16
SF3B2-203ENST00000524627 BTBD19C9JJ37 291 aa16.01■□□□□ 0.15
SF3B2-203ENST00000524627 IRF6O14896 467 aa16.01■□□□□ 0.15
SF3B2-203ENST00000524627 TLR2O60603 784 aa16.01■□□□□ 0.15
SF3B2-203ENST00000524627 SNAPC2Q13487 334 aa16.01■□□□□ 0.15
SF3B2-203ENST00000524627 KIF22Q14807 665 aa16.01■□□□□ 0.15
SF3B2-203ENST00000524627 APOBEC3HQ6NTF7 200 aaKnown RBP16.01■□□□□ 0.15
SF3B2-203ENST00000524627 FAM83AQ86UY5 434 aa16.01■□□□□ 0.15
SF3B2-203ENST00000524627 FAM9BQ8IZU0 186 aa16.01■□□□□ 0.15
SF3B2-203ENST00000524627 MAST3O60307 1309 aa16■□□□□ 0.15
SF3B2-203ENST00000524627 ECM2O94769 699 aaPredicted RBP16■□□□□ 0.15
SF3B2-203ENST00000524627 LACTBP83111 547 aaPredicted RBP16■□□□□ 0.15
SF3B2-203ENST00000524627 PPIL2Q13356 520 aa16■□□□□ 0.15
SF3B2-203ENST00000524627 DCAF15Q66K64 600 aa16■□□□□ 0.15
SF3B2-203ENST00000524627 MIGA2Q7L4E1 593 aa16■□□□□ 0.15
SF3B2-203ENST00000524627 SH3TC2Q8TF17 1288 aa16■□□□□ 0.15
SF3B2-203ENST00000524627 HOOK2Q96ED9 719 aa16■□□□□ 0.15
SF3B2-203ENST00000524627 MRIQ9BWK5 157 aa16■□□□□ 0.15
SF3B2-203ENST00000524627 IFIT1P09914 478 aaKnown RBP15.99■□□□□ 0.15
SF3B2-203ENST00000524627 PUM3Q15397 648 aaKnown RBP15.99■□□□□ 0.15
SF3B2-203ENST00000524627 FKBP1CQ5VVH2 108 aa15.99■□□□□ 0.15
SF3B2-203ENST00000524627 MRPL50Q8N5N7 158 aaKnown RBP15.99■□□□□ 0.15
SF3B2-203ENST00000524627 ZCCHC17Q9NP64 241 aaKnown RBP15.99■□□□□ 0.15
SF3B2-203ENST00000524627 SUGT1Q9Y2Z0 365 aa15.99■□□□□ 0.15
SF3B2-203ENST00000524627 FGFR2P21802 821 aa15.98■□□□□ 0.15
SF3B2-203ENST00000524627 INPP5BP32019 993 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms