RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 WNK4Q96J92 1243 aa12.11□□□□□ -0.47
CNKSR1-209ENST00000524529 CFHR5Q9BXR6 569 aa12.11□□□□□ -0.47
CNKSR1-209ENST00000524529 SERPINA10Q9UK55 444 aa12.11□□□□□ -0.47
CNKSR1-209ENST00000524529 IGF2BP3O00425 579 aaKnown RBP eCLIP12.1□□□□□ -0.47
CNKSR1-209ENST00000524529 MYO1BO43795 1136 aa12.1□□□□□ -0.47
CNKSR1-209ENST00000524529 PPP1R12BO60237 982 aaPredicted RBP12.1□□□□□ -0.47
CNKSR1-209ENST00000524529 SOX10P56693 466 aa12.1□□□□□ -0.47
CNKSR1-209ENST00000524529 SREBF2Q12772 1141 aa12.1□□□□□ -0.47
CNKSR1-209ENST00000524529 CHAF1AQ13111 956 aaPredicted RBP12.1□□□□□ -0.47
CNKSR1-209ENST00000524529 ALDH1L2Q3SY69 923 aa12.1□□□□□ -0.47
CNKSR1-209ENST00000524529 NOM1Q5C9Z4 860 aaKnown RBP12.1□□□□□ -0.47
CNKSR1-209ENST00000524529 ATG9AQ7Z3C6 839 aa12.1□□□□□ -0.47
CNKSR1-209ENST00000524529 SLC10A4Q96EP9 437 aa12.1□□□□□ -0.47
CNKSR1-209ENST00000524529 KIAA0100Q14667 2235 aaKnown RBP12.09□□□□□ -0.47
CNKSR1-209ENST00000524529 TCP10L2B9ZVM9 353 aa12.09□□□□□ -0.47
CNKSR1-209ENST00000524529 SUPT20HL1Q3ZLR7 823 aa12.09□□□□□ -0.47
CNKSR1-209ENST00000524529 IFNL1Q8IU54 200 aa12.09□□□□□ -0.47
CNKSR1-209ENST00000524529 CNKSR2Q8WXI2 1034 aa12.09□□□□□ -0.47
CNKSR1-209ENST00000524529 TMEM39BQ9GZU3 492 aa12.09□□□□□ -0.47
CNKSR1-209ENST00000524529 SMC4Q9NTJ3 1288 aa12.09□□□□□ -0.47
CNKSR1-209ENST00000524529 HPS5Q9UPZ3 1129 aa12.09□□□□□ -0.47
CNKSR1-209ENST00000524529 HTTP42858 3142 aa12.09□□□□□ -0.47
CNKSR1-209ENST00000524529 AK9Q5TCS8 1911 aa12.08□□□□□ -0.48
CNKSR1-209ENST00000524529 MANSC4A6NHS7 340 aaPredicted RBP12.08□□□□□ -0.48
CNKSR1-209ENST00000524529 EYA2O00167 538 aa12.08□□□□□ -0.48
CNKSR1-209ENST00000524529 ZBTB48P10074 688 aaPredicted RBP12.08□□□□□ -0.48
CNKSR1-209ENST00000524529 CACNB3P54284 484 aa12.08□□□□□ -0.48
CNKSR1-209ENST00000524529 CAP1Q01518 475 aa12.08□□□□□ -0.48
CNKSR1-209ENST00000524529 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.08□□□□□ -0.48
CNKSR1-209ENST00000524529 PTPN18Q99952 460 aa12.08□□□□□ -0.48
CNKSR1-209ENST00000524529 NOB1Q9ULX3 412 aaKnown RBP12.08□□□□□ -0.48
CNKSR1-209ENST00000524529 UNCXA6NJT0 531 aa12.07□□□□□ -0.48
CNKSR1-209ENST00000524529 IREB2P48200 963 aaKnown RBP12.07□□□□□ -0.48
CNKSR1-209ENST00000524529 HDLBPQ00341 1268 aaKnown RBP12.07□□□□□ -0.48
CNKSR1-209ENST00000524529 PUM3Q15397 648 aaKnown RBP12.07□□□□□ -0.48
CNKSR1-209ENST00000524529 CAVIN4Q5BKX8 364 aa12.07□□□□□ -0.48
CNKSR1-209ENST00000524529 APOBEC3HQ6NTF7 200 aaKnown RBP12.07□□□□□ -0.48
CNKSR1-209ENST00000524529 VPS37DQ86XT2 251 aa12.07□□□□□ -0.48
CNKSR1-209ENST00000524529 ANKRD13AQ8IZ07 590 aa12.07□□□□□ -0.48
CNKSR1-209ENST00000524529 MYH2Q9UKX2 1941 aa12.07□□□□□ -0.48
CNKSR1-209ENST00000524529 KIF16BQ96L93 1317 aa12.07□□□□□ -0.48
CNKSR1-209ENST00000524529 TESPA1A2RU30 521 aaPredicted RBP12.06□□□□□ -0.48
CNKSR1-209ENST00000524529 FKTNO75072 461 aa12.06□□□□□ -0.48
CNKSR1-209ENST00000524529 TNFAIP1Q13829 316 aa12.06□□□□□ -0.48
CNKSR1-209ENST00000524529 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.06□□□□□ -0.48
CNKSR1-209ENST00000524529 TBC1D22AQ8WUA7 517 aa12.06□□□□□ -0.48
CNKSR1-209ENST00000524529 OPTNQ96CV9 577 aa12.06□□□□□ -0.48
CNKSR1-209ENST00000524529 MS4A4AQ96JQ5 239 aa12.06□□□□□ -0.48
CNKSR1-209ENST00000524529 ZDHHC15Q96MV8 337 aa12.06□□□□□ -0.48
CNKSR1-209ENST00000524529 ELP3Q9H9T3 547 aa12.06□□□□□ -0.48
CNKSR1-209ENST00000524529 PA2G4Q9UQ80 394 aaKnown RBP12.06□□□□□ -0.48
CNKSR1-209ENST00000524529 ZSWIM8A7E2V4 1837 aa12.06□□□□□ -0.48
CNKSR1-209ENST00000524529 FRAT2O75474 233 aaPredicted RBP12.05□□□□□ -0.48
CNKSR1-209ENST00000524529 ALDH1A1P00352 501 aa12.05□□□□□ -0.48
CNKSR1-209ENST00000524529 IFIT1P09914 478 aaKnown RBP12.05□□□□□ -0.48
CNKSR1-209ENST00000524529 INHBEP58166 350 aa12.05□□□□□ -0.48
CNKSR1-209ENST00000524529 PKN2Q16513 984 aaKnown RBP12.05□□□□□ -0.48
CNKSR1-209ENST00000524529 LPIN2Q92539 896 aa12.05□□□□□ -0.48
CNKSR1-209ENST00000524529 TEKT1Q969V4 418 aa12.05□□□□□ -0.48
CNKSR1-209ENST00000524529 YTHDC1Q96MU7 727 aaKnown RBP12.05□□□□□ -0.48
CNKSR1-209ENST00000524529 MEIS3Q99687 375 aa12.05□□□□□ -0.48
CNKSR1-209ENST00000524529 MRIQ9BWK5 157 aa12.05□□□□□ -0.48
CNKSR1-209ENST00000524529 SIL1Q9H173 461 aa12.05□□□□□ -0.48
CNKSR1-209ENST00000524529 LRRFIP2Q9Y608 721 aaKnown RBP12.05□□□□□ -0.48
CNKSR1-209ENST00000524529 UBTFL1P0CB47 393 aaPredicted RBP12.04□□□□□ -0.48
CNKSR1-209ENST00000524529 SLC5A1P13866 664 aa12.04□□□□□ -0.48
CNKSR1-209ENST00000524529 RARSP54136 660 aaKnown RBP12.04□□□□□ -0.48
CNKSR1-209ENST00000524529 CRHR2Q13324 411 aa12.04□□□□□ -0.48
CNKSR1-209ENST00000524529 VGLL4Q14135 290 aa12.04□□□□□ -0.48
CNKSR1-209ENST00000524529 FBXO46Q6PJ61 603 aaPredicted RBP12.04□□□□□ -0.48
CNKSR1-209ENST00000524529 BRI3BPQ8WY22 251 aa12.04□□□□□ -0.48
CNKSR1-209ENST00000524529 TNNQ9UQP3 1299 aa12.04□□□□□ -0.48
CNKSR1-209ENST00000524529 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.04□□□□□ -0.48
CNKSR1-209ENST00000524529 CENPFP49454 3210 aa12.04□□□□□ -0.48
CNKSR1-209ENST00000524529 CIAO1O76071 339 aa12.03□□□□□ -0.48
CNKSR1-209ENST00000524529 PRDX5P30044 214 aa12.03□□□□□ -0.48
CNKSR1-209ENST00000524529 ADORA1P30542 326 aa12.03□□□□□ -0.48
CNKSR1-209ENST00000524529 PHKA1P46020 1223 aa12.03□□□□□ -0.48
CNKSR1-209ENST00000524529 TNNI2P48788 182 aa12.03□□□□□ -0.48
CNKSR1-209ENST00000524529 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
CNKSR1-209ENST00000524529 HHIPL2Q6UWX4 724 aa12.03□□□□□ -0.48
CNKSR1-209ENST00000524529 OTOP1Q7RTM1 612 aa12.03□□□□□ -0.48
CNKSR1-209ENST00000524529 SUGT1Q9Y2Z0 365 aa12.03□□□□□ -0.48
CNKSR1-209ENST00000524529 SNCAIPQ9Y6H5 919 aa12.03□□□□□ -0.48
CNKSR1-209ENST00000524529 DIXDC1Q155Q3 683 aa12.02□□□□□ -0.49
CNKSR1-209ENST00000524529 ATP2B3Q16720 1220 aa12.02□□□□□ -0.49
CNKSR1-209ENST00000524529 PRPF38BQ5VTL8 546 aaKnown RBP12.02□□□□□ -0.49
CNKSR1-209ENST00000524529 FKBP1CQ5VVH2 108 aa12.02□□□□□ -0.49
CNKSR1-209ENST00000524529 FAM83AQ86UY5 434 aa12.02□□□□□ -0.49
CNKSR1-209ENST00000524529 WDR66Q8TBY9 1149 aa12.02□□□□□ -0.49
CNKSR1-209ENST00000524529 CD99L2Q8TCZ2 262 aa12.02□□□□□ -0.49
CNKSR1-209ENST00000524529 API5Q9BZZ5 524 aaKnown RBP12.02□□□□□ -0.49
CNKSR1-209ENST00000524529 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
CNKSR1-209ENST00000524529 DAGLAQ9Y4D2 1042 aa12.02□□□□□ -0.49
CNKSR1-209ENST00000524529 TRIM17Q9Y577 477 aa12.02□□□□□ -0.49
CNKSR1-209ENST00000524529 RPAP1Q9BWH6 1393 aaPredicted RBP12.02□□□□□ -0.49
CNKSR1-209ENST00000524529 RBBP6Q7Z6E9 1792 aaKnown RBP12.01□□□□□ -0.49
CNKSR1-209ENST00000524529 SPDYE5A6NIY4 337 aa12.01□□□□□ -0.49
CNKSR1-209ENST00000524529 NFIAQ12857 509 aa12.01□□□□□ -0.49
CNKSR1-209ENST00000524529 INTS3Q68E01 1043 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms