RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 BMP2P12643 396 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 KCNH2Q12809 1159 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 TRIM28Q13263 835 aaKnown RBP8.37□□□□□ -1.07
CSMD1-211ENST00000523062 TCIRG1Q13488 830 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 HSP90AB3PQ58FF7 597 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 EPHA10Q5JZY3 1008 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 NUTM1Q86Y26 1132 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 FNBP4Q8N3X1 1017 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-211ENST00000523062 SMARCC1Q92922 1105 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-211ENST00000523062 SLC4A9Q96Q91 983 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 ISCA1Q9BUE6 129 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 COPRSQ9NQ92 184 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 PCDHGC3Q9UN70 934 aa8.37□□□□□ -1.07
CSMD1-211ENST00000523062 ZNF330Q9Y3S2 320 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-211ENST00000523062 TUBGCP6Q96RT7 1819 aa8.36□□□□□ -1.07
CSMD1-211ENST00000523062 GLRX3O76003 335 aaKnown RBP8.36□□□□□ -1.07
CSMD1-211ENST00000523062 IFIT2P09913 472 aaKnown RBP8.36□□□□□ -1.07
CSMD1-211ENST00000523062 SLURP2P0DP57 97 aa8.36□□□□□ -1.07
CSMD1-211ENST00000523062 IL6STP40189 918 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-211ENST00000523062 RFX5P48382 616 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-211ENST00000523062 MDM2Q00987 491 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-211ENST00000523062 TSHZ3Q63HK5 1081 aa8.36□□□□□ -1.07
CSMD1-211ENST00000523062 FAM174AQ8TBP5 190 aa8.36□□□□□ -1.07
CSMD1-211ENST00000523062 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
CSMD1-211ENST00000523062 CDK15Q96Q40 435 aa8.36□□□□□ -1.07
CSMD1-211ENST00000523062 ZFAND3Q9H8U3 227 aa8.36□□□□□ -1.07
CSMD1-211ENST00000523062 PALLDQ8WX93 1383 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 THSD7AQ9UPZ6 1657 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 MSTNO14793 375 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 PCCAP05165 728 aaPredicted RBP8.35□□□□□ -1.07
CSMD1-211ENST00000523062 MEX3CQ5U5Q3 659 aaKnown RBP8.35□□□□□ -1.07
CSMD1-211ENST00000523062 GIGYF2Q6Y7W6 1299 aaKnown RBP8.35□□□□□ -1.07
CSMD1-211ENST00000523062 AACSQ86V21 672 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 GPIHBP1Q8IV16 184 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 HSCBQ8IWL3 235 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 CNTROBQ8N137 903 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 PI4K2BQ8TCG2 481 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 ITPKCQ96DU7 683 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 ACSBG1Q96GR2 724 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 RTN4Q9NQC3 1192 aaKnown RBP8.35□□□□□ -1.07
CSMD1-211ENST00000523062 ECHDC1Q9NTX5 307 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 USP21Q9UK80 565 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 ZBTB1Q9Y2K1 713 aa8.35□□□□□ -1.07
CSMD1-211ENST00000523062 KAT6BQ8WYB5 2073 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 RREB1Q92766 1687 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 LOC102724428A0A0B4J2F2 783 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 ERVV-1B6SEH8 477 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 SASH1O94885 1247 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 CHMLP26374 656 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 SIK1P57059 783 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 FOXO4P98177 505 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 PTPN12Q05209 780 aaKnown RBP8.34□□□□□ -1.07
CSMD1-211ENST00000523062 LMBR1LQ6UX01 489 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 DZIP3Q86Y13 1208 aaKnown RBP8.34□□□□□ -1.07
CSMD1-211ENST00000523062 JARID2Q92833 1246 aaPredicted RBP8.34□□□□□ -1.07
CSMD1-211ENST00000523062 RILPL2Q969X0 211 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 ESYT1Q9BSJ8 1104 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 PLA2G12BQ9BX93 195 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 SIL1Q9H173 461 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 CCDC87Q9NVE4 849 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 DNMT3LQ9UJW3 386 aa8.34□□□□□ -1.07
CSMD1-211ENST00000523062 CDHR2Q9BYE9 1310 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 FDX1P10109 184 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 HSPA1LP34931 641 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 CRKLP46109 303 aaKnown RBP8.33□□□□□ -1.08
CSMD1-211ENST00000523062 MAP2K5Q13163 448 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 NR5A1Q13285 461 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 RABEP1Q15276 862 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.33□□□□□ -1.08
CSMD1-211ENST00000523062 LINC00528Q8N1L1 170 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 ZBTB38Q8NAP3 1195 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-211ENST00000523062 SNX21Q969T3 373 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 ARXQ96QS3 562 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 USP26Q9BXU7 913 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 CHMP3Q9Y3E7 222 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 ZNF831Q5JPB2 1677 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 ANKRD36CQ5JPF3 1778 aa8.33□□□□□ -1.08
CSMD1-211ENST00000523062 ATRNO75882 1429 aa8.32□□□□□ -1.08
CSMD1-211ENST00000523062 C6orf229H3BNL8 230 aa8.32□□□□□ -1.08
CSMD1-211ENST00000523062 IRF6O14896 467 aa8.32□□□□□ -1.08
CSMD1-211ENST00000523062 SPTLC1O15269 473 aa8.32□□□□□ -1.08
CSMD1-211ENST00000523062 EPB41L2O43491 1005 aaKnown RBP8.32□□□□□ -1.08
CSMD1-211ENST00000523062 MCCP23508 829 aa8.32□□□□□ -1.08
CSMD1-211ENST00000523062 EIF5P55010 431 aaKnown RBP8.32□□□□□ -1.08
CSMD1-211ENST00000523062 TNNI3KQ59H18 835 aa8.32□□□□□ -1.08
CSMD1-211ENST00000523062 INTS5Q6P9B9 1019 aaKnown RBP8.32□□□□□ -1.08
CSMD1-211ENST00000523062 NLRP10Q86W26 655 aa8.32□□□□□ -1.08
CSMD1-211ENST00000523062 KLHDC4Q8TBB5 520 aa8.32□□□□□ -1.08
CSMD1-211ENST00000523062 WHAMMQ8TF30 809 aa8.32□□□□□ -1.08
CSMD1-211ENST00000523062 EAF2Q96CJ1 260 aaPredicted RBP8.32□□□□□ -1.08
CSMD1-211ENST00000523062 KIF2CQ99661 725 aa8.32□□□□□ -1.08
CSMD1-211ENST00000523062 FPGT-TNNI3KV9GXZ4 949 aa8.32□□□□□ -1.08
CSMD1-211ENST00000523062 AFF2P51816 1311 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 EYA2O00167 538 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 HIP1O00291 1037 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 CIAO1O76071 339 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 NR3C2P08235 984 aa8.31□□□□□ -1.08
CSMD1-211ENST00000523062 IL15P40933 162 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-211ENST00000523062 TFCP2Q12800 502 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms