RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 AOX1Q06278 1338 aa11.86□□□□□ -0.51
SDC2-207ENST00000522911 NBPF7P0C2Y1 421 aaPredicted RBP11.85□□□□□ -0.51
SDC2-207ENST00000522911 GJA5P36382 358 aa11.85□□□□□ -0.51
SDC2-207ENST00000522911 ZEB1P37275 1124 aaPredicted RBP11.85□□□□□ -0.51
SDC2-207ENST00000522911 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
SDC2-207ENST00000522911 ERO1AQ96HE7 468 aa11.85□□□□□ -0.51
SDC2-207ENST00000522911 SUCLG2Q96I99 432 aa11.85□□□□□ -0.51
SDC2-207ENST00000522911 MS4A4AQ96JQ5 239 aa11.85□□□□□ -0.51
SDC2-207ENST00000522911 VEZTQ9HBM0 779 aa11.85□□□□□ -0.51
SDC2-207ENST00000522911 ZCCHC17Q9NP64 241 aaKnown RBP11.85□□□□□ -0.51
SDC2-207ENST00000522911 TTF2Q9UNY4 1162 aaKnown RBP11.85□□□□□ -0.51
SDC2-207ENST00000522911 RPAP1Q9BWH6 1393 aaPredicted RBP11.84□□□□□ -0.51
SDC2-207ENST00000522911 F8W031 263 aaPredicted RBP11.84□□□□□ -0.51
SDC2-207ENST00000522911 PDE8BO95263 885 aa11.84□□□□□ -0.51
SDC2-207ENST00000522911 TNNI2P48788 182 aa11.84□□□□□ -0.51
SDC2-207ENST00000522911 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.84□□□□□ -0.51
SDC2-207ENST00000522911 FAM83AQ86UY5 434 aa11.84□□□□□ -0.51
SDC2-207ENST00000522911 ARMC5Q96C12 935 aa11.84□□□□□ -0.51
SDC2-207ENST00000522911 PTPN18Q99952 460 aa11.84□□□□□ -0.51
SDC2-207ENST00000522911 PUS3Q9BZE2 481 aaKnown RBP11.84□□□□□ -0.51
SDC2-207ENST00000522911 BICC1Q9H694 974 aaKnown RBP11.84□□□□□ -0.51
SDC2-207ENST00000522911 FZD1Q9UP38 647 aa11.84□□□□□ -0.51
SDC2-207ENST00000522911 PLIN1O60240 522 aa11.83□□□□□ -0.52
SDC2-207ENST00000522911 CRKP46108 304 aa11.83□□□□□ -0.52
SDC2-207ENST00000522911 GYG1P46976 350 aa11.83□□□□□ -0.52
SDC2-207ENST00000522911 RBM5P52756 815 aaKnown RBP eCLIP11.83□□□□□ -0.528e-10■□□□□ 10.2
SDC2-207ENST00000522911 CRHR2Q13324 411 aa11.83□□□□□ -0.52
SDC2-207ENST00000522911 CAVIN4Q5BKX8 364 aa11.83□□□□□ -0.52
SDC2-207ENST00000522911 SLC4A10Q6U841 1118 aa11.83□□□□□ -0.52
SDC2-207ENST00000522911 ANKRD44Q8N8A2 993 aa11.83□□□□□ -0.52
SDC2-207ENST00000522911 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.83□□□□□ -0.524e-7■■■□□ 17.7
SDC2-207ENST00000522911 HOOK2Q96ED9 719 aa11.83□□□□□ -0.52
SDC2-207ENST00000522911 ZDHHC15Q96MV8 337 aa11.83□□□□□ -0.52
SDC2-207ENST00000522911 TDRD3Q9H7E2 651 aaKnown RBP11.83□□□□□ -0.52
SDC2-207ENST00000522911 MAST3O60307 1309 aa11.83□□□□□ -0.52
SDC2-207ENST00000522911 ZNF316A6NFI3 1004 aaPredicted RBP11.82□□□□□ -0.52
SDC2-207ENST00000522911 FGFR2P21802 821 aa11.82□□□□□ -0.52
SDC2-207ENST00000522911 GTF2A2P52657 109 aa11.82□□□□□ -0.52
SDC2-207ENST00000522911 MAP3K9P80192 1104 aa11.82□□□□□ -0.52
SDC2-207ENST00000522911 SP3Q02447 781 aa11.82□□□□□ -0.52
SDC2-207ENST00000522911 HHIPL2Q6UWX4 724 aa11.82□□□□□ -0.52
SDC2-207ENST00000522911 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
SDC2-207ENST00000522911 TEKT1Q969V4 418 aa11.82□□□□□ -0.52
SDC2-207ENST00000522911 OPTNQ96CV9 577 aa11.82□□□□□ -0.52
SDC2-207ENST00000522911 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
SDC2-207ENST00000522911 PTPN22Q9Y2R2 807 aa11.82□□□□□ -0.52
SDC2-207ENST00000522911 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
SDC2-207ENST00000522911 TRIM17Q9Y577 477 aa11.82□□□□□ -0.52
SDC2-207ENST00000522911 RBBP6Q7Z6E9 1792 aaKnown RBP11.82□□□□□ -0.52
SDC2-207ENST00000522911 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
SDC2-207ENST00000522911 SPDYE5A6NIY4 337 aa11.81□□□□□ -0.52
SDC2-207ENST00000522911 E9PSI1 815 aa11.81□□□□□ -0.52
SDC2-207ENST00000522911 VGLL4Q14135 290 aa11.81□□□□□ -0.52
SDC2-207ENST00000522911 ARHGEF6Q15052 776 aa11.81□□□□□ -0.52
SDC2-207ENST00000522911 VPS37DQ86XT2 251 aa11.81□□□□□ -0.52
SDC2-207ENST00000522911 GCC1Q96CN9 775 aa11.81□□□□□ -0.52
SDC2-207ENST00000522911 USP44Q9H0E7 712 aa11.81□□□□□ -0.52
SDC2-207ENST00000522911 EFCC1Q9HA90 598 aa11.81□□□□□ -0.52
SDC2-207ENST00000522911 JAG2Q9Y219 1238 aa11.81□□□□□ -0.52
SDC2-207ENST00000522911 PUM3Q15397 648 aaKnown RBP11.8□□□□□ -0.52
SDC2-207ENST00000522911 GRIK5Q16478 980 aa11.8□□□□□ -0.52
SDC2-207ENST00000522911 ALDH1L2Q3SY69 923 aa11.8□□□□□ -0.52
SDC2-207ENST00000522911 LRRC24Q50LG9 513 aa11.8□□□□□ -0.52
SDC2-207ENST00000522911 METTL24Q5JXM2 366 aa11.8□□□□□ -0.52
SDC2-207ENST00000522911 APOBEC3HQ6NTF7 200 aaKnown RBP11.8□□□□□ -0.52
SDC2-207ENST00000522911 ERO1BQ86YB8 467 aa11.8□□□□□ -0.52
SDC2-207ENST00000522911 BRI3BPQ8WY22 251 aa11.8□□□□□ -0.52
SDC2-207ENST00000522911 TMEM39BQ9GZU3 492 aa11.8□□□□□ -0.52
SDC2-207ENST00000522911 CSADQ9Y600 493 aa11.8□□□□□ -0.52
SDC2-207ENST00000522911 GNRH1P01148 92 aa11.79□□□□□ -0.52
SDC2-207ENST00000522911 IFIT1P09914 478 aaKnown RBP11.79□□□□□ -0.52
SDC2-207ENST00000522911 CT47B1P0C2W7 299 aaPredicted RBP11.79□□□□□ -0.52
SDC2-207ENST00000522911 CDAN1Q8IWY9 1227 aa11.79□□□□□ -0.52
SDC2-207ENST00000522911 WDR66Q8TBY9 1149 aa11.79□□□□□ -0.52
SDC2-207ENST00000522911 CD99L2Q8TCZ2 262 aa11.79□□□□□ -0.52
SDC2-207ENST00000522911 ELP3Q9H9T3 547 aa11.79□□□□□ -0.52
SDC2-207ENST00000522911 ZFYVE28Q9HCC9 887 aa11.79□□□□□ -0.52
SDC2-207ENST00000522911 CCL15-CCL14A0A0B4J2E2 113 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 TCP10L2B9ZVM9 353 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 TLR2O60603 784 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 CETPP11597 493 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 RFX5P48382 616 aaPredicted RBP11.78□□□□□ -0.52
SDC2-207ENST00000522911 PPIL2Q13356 520 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 CCL15Q16663 113 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 DCAF15Q66K64 600 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 FAM9BQ8IZU0 186 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 SSH1Q8WYL5 1049 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 LPIN2Q92539 896 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 ZNF333Q96JL9 665 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 TMOD2Q9NZR1 351 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 ZNF112Q9UJU3 913 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 SNCAIPQ9Y6H5 919 aa11.78□□□□□ -0.52
SDC2-207ENST00000522911 EYA2O00167 538 aa11.77□□□□□ -0.53
SDC2-207ENST00000522911 FRAT2O75474 233 aaPredicted RBP11.77□□□□□ -0.53
SDC2-207ENST00000522911 WDHD1O75717 1129 aaPredicted RBP11.77□□□□□ -0.53
SDC2-207ENST00000522911 CIAO1O76071 339 aa11.77□□□□□ -0.53
SDC2-207ENST00000522911 BCAMP50895 628 aa11.77□□□□□ -0.53
SDC2-207ENST00000522911 PRMT2P55345 433 aa11.77□□□□□ -0.53
SDC2-207ENST00000522911 CAP1Q01518 475 aa11.77□□□□□ -0.53
SDC2-207ENST00000522911 PPATQ06203 517 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms