RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.95□□□□□ -1.3
SKP1-210ENST00000522855 TMEM238LA0A1B0GVL6 79 aa6.94□□□□□ -1.3
SKP1-210ENST00000522855 ALX3O95076 343 aa6.94□□□□□ -1.3
SKP1-210ENST00000522855 WISP1O95388 367 aa6.94□□□□□ -1.3
SKP1-210ENST00000522855 ACPPP15309 386 aa6.94□□□□□ -1.3
SKP1-210ENST00000522855 HDLBPQ00341 1268 aaKnown RBP6.94□□□□□ -1.3
SKP1-210ENST00000522855 LDLRAD1Q5T700 205 aa6.94□□□□□ -1.3
SKP1-210ENST00000522855 HS2ST1Q7LGA3 356 aa6.94□□□□□ -1.3
SKP1-210ENST00000522855 MUC3BQ9H195 1237 aa6.94□□□□□ -1.3
SKP1-210ENST00000522855 ZFP64Q9NPA5 681 aa6.94□□□□□ -1.3
SKP1-210ENST00000522855 PPME1Q9Y570 386 aa6.94□□□□□ -1.3
SKP1-210ENST00000522855 SCO2A0A1W2PP80 73 aa6.93□□□□□ -1.3
SKP1-210ENST00000522855 PTPRAP18433 802 aa6.93□□□□□ -1.3
SKP1-210ENST00000522855 ITPKAP23677 461 aa6.93□□□□□ -1.3
SKP1-210ENST00000522855 ERCC5P28715 1186 aaPredicted RBP6.93□□□□□ -1.3
SKP1-210ENST00000522855 CEP135Q66GS9 1140 aa6.93□□□□□ -1.3
SKP1-210ENST00000522855 C3orf58Q8NDZ4 430 aa6.93□□□□□ -1.3
SKP1-210ENST00000522855 DCAF11Q8TEB1 546 aa6.93□□□□□ -1.3
SKP1-210ENST00000522855 ANKRD24Q8TF21 1146 aa6.93□□□□□ -1.3
SKP1-210ENST00000522855 USP31Q70CQ4 1352 aa6.93□□□□□ -1.3
SKP1-210ENST00000522855 NFKBIEO00221 500 aa6.92□□□□□ -1.3
SKP1-210ENST00000522855 EPHA1P21709 976 aa6.92□□□□□ -1.3
SKP1-210ENST00000522855 RPS26P11Q5JNZ5 115 aaPredicted RBP6.92□□□□□ -1.3
SKP1-210ENST00000522855 MEI1Q5TIA1 1274 aa6.92□□□□□ -1.3
SKP1-210ENST00000522855 AGGF1Q8N302 714 aaeCLIP6.92□□□□□ -1.3
SKP1-210ENST00000522855 ASAP3Q8TDY4 903 aa6.92□□□□□ -1.3
SKP1-210ENST00000522855 NXPE3Q969Y0 559 aa6.92□□□□□ -1.3
SKP1-210ENST00000522855 NOC4LQ9BVI4 516 aaKnown RBP6.92□□□□□ -1.3
SKP1-210ENST00000522855 CEP44Q9C0F1 390 aa6.92□□□□□ -1.3
SKP1-210ENST00000522855 ADAM19Q9H013 955 aa6.92□□□□□ -1.3
SKP1-210ENST00000522855 KCNK4Q9NYG8 393 aa6.92□□□□□ -1.3
SKP1-210ENST00000522855 AKAP2Q9Y2D5 859 aa6.92□□□□□ -1.3
SKP1-210ENST00000522855 A0A096LPE4 126 aa6.91□□□□□ -1.3
SKP1-210ENST00000522855 A0A1W2PPZ6 126 aa6.91□□□□□ -1.3
SKP1-210ENST00000522855 LINC01387J3KSC0 135 aa6.91□□□□□ -1.3
SKP1-210ENST00000522855 RLBP1P12271 317 aa6.91□□□□□ -1.3
SKP1-210ENST00000522855 CDC27P30260 824 aa6.91□□□□□ -1.3
SKP1-210ENST00000522855 ZC3H6P61129 1189 aaKnown RBP6.91□□□□□ -1.3
SKP1-210ENST00000522855 TXNDC11Q6PKC3 985 aa6.91□□□□□ -1.3
SKP1-210ENST00000522855 NT5DC4Q86YG4 428 aa6.91□□□□□ -1.3
SKP1-210ENST00000522855 BSNDQ8WZ55 320 aa6.91□□□□□ -1.3
SKP1-210ENST00000522855 HHIPQ96QV1 700 aa6.91□□□□□ -1.3
SKP1-210ENST00000522855 LACRTQ9GZZ8 138 aa6.91□□□□□ -1.3
SKP1-210ENST00000522855 RNF112Q9ULX5 631 aa6.91□□□□□ -1.3
SKP1-210ENST00000522855 ADAM11O75078 769 aa6.9□□□□□ -1.3
SKP1-210ENST00000522855 TRPA1O75762 1119 aa6.9□□□□□ -1.3
SKP1-210ENST00000522855 GRIA4P48058 902 aa6.9□□□□□ -1.3
SKP1-210ENST00000522855 CABP4P57796 275 aa6.9□□□□□ -1.3
SKP1-210ENST00000522855 PWP1Q13610 501 aa6.9□□□□□ -1.3
SKP1-210ENST00000522855 CCDC85BQ15834 202 aaPredicted RBP6.9□□□□□ -1.3
SKP1-210ENST00000522855 METTL16Q86W50 562 aaKnown RBP6.9□□□□□ -1.3
SKP1-210ENST00000522855 C8orf37Q96NL8 207 aa6.9□□□□□ -1.3
SKP1-210ENST00000522855 UBL7Q96S82 380 aaPredicted RBP6.9□□□□□ -1.3
SKP1-210ENST00000522855 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.3
SKP1-210ENST00000522855 CLEC4MQ9H2X3 399 aaPredicted RBP6.9□□□□□ -1.3
SKP1-210ENST00000522855 CCSER2Q9H7U1 834 aa6.9□□□□□ -1.3
SKP1-210ENST00000522855 GGT7Q9UJ14 662 aa6.9□□□□□ -1.3
SKP1-210ENST00000522855 METTL12A8MUP2 240 aa6.89□□□□□ -1.31
SKP1-210ENST00000522855 HYAL3O43820 417 aaPredicted RBP6.89□□□□□ -1.31
SKP1-210ENST00000522855 KIAA1211Q6ZU35 1233 aa6.89□□□□□ -1.31
SKP1-210ENST00000522855 SV2BQ7L1I2 683 aa6.89□□□□□ -1.31
SKP1-210ENST00000522855 PSMG3-AS1Q96PY0 264 aa6.89□□□□□ -1.31
SKP1-210ENST00000522855 TGIF2Q9GZN2 237 aa6.89□□□□□ -1.31
SKP1-210ENST00000522855 ZNF576Q9H609 170 aa6.89□□□□□ -1.31
SKP1-210ENST00000522855 FSCN2O14926 492 aa6.88□□□□□ -1.31
SKP1-210ENST00000522855 EIF4EBP3O60516 100 aaPredicted RBP6.88□□□□□ -1.31
SKP1-210ENST00000522855 FSTP19883 344 aa6.88□□□□□ -1.31
SKP1-210ENST00000522855 CD68P34810 354 aaPredicted RBP6.88□□□□□ -1.31
SKP1-210ENST00000522855 SPRED3Q2MJR0 410 aa6.88□□□□□ -1.31
SKP1-210ENST00000522855 C9orf131Q5VYM1 1079 aa6.88□□□□□ -1.31
SKP1-210ENST00000522855 TPTE2Q6XPS3 522 aa6.88□□□□□ -1.31
SKP1-210ENST00000522855 USP48Q86UV5 1035 aa6.88□□□□□ -1.31
SKP1-210ENST00000522855 ARMC10Q8N2F6 343 aa6.88□□□□□ -1.31
SKP1-210ENST00000522855 DDX54Q8TDD1 881 aaKnown RBP6.88□□□□□ -1.31
SKP1-210ENST00000522855 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
SKP1-210ENST00000522855 SH2B1Q9NRF2 756 aaPredicted RBP6.88□□□□□ -1.31
SKP1-210ENST00000522855 GPN3Q9UHW5 284 aaPredicted RBP6.88□□□□□ -1.31
SKP1-210ENST00000522855 PPP2R3AQ06190 1150 aa6.87□□□□□ -1.31
SKP1-210ENST00000522855 ERMP1Q7Z2K6 904 aa6.87□□□□□ -1.31
SKP1-210ENST00000522855 KLHL23Q8NBE8 558 aa6.87□□□□□ -1.31
SKP1-210ENST00000522855 FAM46AQ96IP4 442 aaKnown RBP6.87□□□□□ -1.31
SKP1-210ENST00000522855 CARD10Q9BWT7 1032 aa6.87□□□□□ -1.31
SKP1-210ENST00000522855 SOX13Q9UN79 622 aa6.87□□□□□ -1.31
SKP1-210ENST00000522855 SAMM50Q9Y512 469 aa6.87□□□□□ -1.31
SKP1-210ENST00000522855 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.86□□□□□ -1.31
SKP1-210ENST00000522855 H3BRJ5 948 aa6.86□□□□□ -1.31
SKP1-210ENST00000522855 FBXO24O75426 580 aa6.86□□□□□ -1.31
SKP1-210ENST00000522855 PCDH1Q08174 1060 aa6.86□□□□□ -1.31
SKP1-210ENST00000522855 RAD51AP2Q09MP3 1159 aa6.86□□□□□ -1.31
SKP1-210ENST00000522855 GNL2Q13823 731 aaKnown RBP6.86□□□□□ -1.31
SKP1-210ENST00000522855 ACAD11Q709F0 780 aa6.86□□□□□ -1.31
SKP1-210ENST00000522855 SLC51AQ86UW1 340 aa6.86□□□□□ -1.31
SKP1-210ENST00000522855 ZNF654Q8IZM8 581 aa6.86□□□□□ -1.31
SKP1-210ENST00000522855 UBASH3BQ8TF42 649 aa6.86□□□□□ -1.31
SKP1-210ENST00000522855 WNT8BQ93098 351 aa6.86□□□□□ -1.31
SKP1-210ENST00000522855 TMEM39AQ9NV64 488 aa6.86□□□□□ -1.31
SKP1-210ENST00000522855 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.86□□□□□ -1.31
SKP1-210ENST00000522855 B3GALT4O96024 378 aa6.85□□□□□ -1.31
SKP1-210ENST00000522855 GLB1P16278 677 aa6.85□□□□□ -1.31
SKP1-210ENST00000522855 UVSSAQ2YD98 709 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 3416.9 ms