RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 PDE8BO95263 885 aa12.71□□□□□ -0.37
TRIM35-204ENST00000521283 HIRAP54198 1017 aaPredicted RBP12.71□□□□□ -0.37
TRIM35-204ENST00000521283 MFSD10Q14728 455 aa12.71□□□□□ -0.37
TRIM35-204ENST00000521283 DEFB115Q30KQ5 88 aa12.71□□□□□ -0.37
TRIM35-204ENST00000521283 TBC1D10BQ4KMP7 808 aaPredicted RBP12.71□□□□□ -0.37
TRIM35-204ENST00000521283 METTL24Q5JXM2 366 aa12.71□□□□□ -0.37
TRIM35-204ENST00000521283 SAMD7Q7Z3H4 446 aa12.71□□□□□ -0.37
TRIM35-204ENST00000521283 SULF1Q8IWU6 871 aa12.71□□□□□ -0.37
TRIM35-204ENST00000521283 ZNF594Q96JF6 807 aaPredicted RBP12.71□□□□□ -0.37
TRIM35-204ENST00000521283 HHIPL1Q96JK4 782 aa12.71□□□□□ -0.37
TRIM35-204ENST00000521283 MYOZ2Q9NPC6 264 aa12.71□□□□□ -0.37
TRIM35-204ENST00000521283 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
TRIM35-204ENST00000521283 POLR2AP24928 1970 aaKnown RBP12.7□□□□□ -0.38
TRIM35-204ENST00000521283 CNTNAP1P78357 1384 aa12.7□□□□□ -0.38
TRIM35-204ENST00000521283 IRS2Q9Y4H2 1338 aa12.7□□□□□ -0.38
TRIM35-204ENST00000521283 EYA2O00167 538 aa12.7□□□□□ -0.38
TRIM35-204ENST00000521283 PLIN1O60240 522 aa12.7□□□□□ -0.38
TRIM35-204ENST00000521283 HIBADHP31937 336 aaKnown RBP12.7□□□□□ -0.38
TRIM35-204ENST00000521283 ECE1P42892 770 aa12.7□□□□□ -0.38
TRIM35-204ENST00000521283 TXNRD3Q86VQ6 643 aa12.7□□□□□ -0.38
TRIM35-204ENST00000521283 VPS37DQ86XT2 251 aa12.7□□□□□ -0.38
TRIM35-204ENST00000521283 HELBQ8NG08 1087 aaPredicted RBP12.7□□□□□ -0.38
TRIM35-204ENST00000521283 TRPM4Q8TD43 1214 aa12.7□□□□□ -0.38
TRIM35-204ENST00000521283 FRAT1Q92837 279 aaPredicted RBP12.7□□□□□ -0.38
TRIM35-204ENST00000521283 RNF166Q96A37 237 aaPredicted RBP12.7□□□□□ -0.38
TRIM35-204ENST00000521283 FAM205AQ6ZU69 1335 aa12.69□□□□□ -0.38
TRIM35-204ENST00000521283 IFIT1P09914 478 aaKnown RBP12.69□□□□□ -0.38
TRIM35-204ENST00000521283 TRIM27P14373 513 aa12.69□□□□□ -0.38
TRIM35-204ENST00000521283 GTF2IP78347 998 aa12.69□□□□□ -0.38
TRIM35-204ENST00000521283 PUM3Q15397 648 aaKnown RBP12.69□□□□□ -0.38
TRIM35-204ENST00000521283 KRT26Q7Z3Y9 468 aa12.69□□□□□ -0.38
TRIM35-204ENST00000521283 TBC1D22AQ8WUA7 517 aa12.69□□□□□ -0.38
TRIM35-204ENST00000521283 BBXQ8WY36 941 aaPredicted RBP12.69□□□□□ -0.38
TRIM35-204ENST00000521283 FBXW7Q969H0 707 aa12.69□□□□□ -0.38
TRIM35-204ENST00000521283 DDX27Q96GQ7 796 aaKnown RBP12.69□□□□□ -0.38
TRIM35-204ENST00000521283 ABT1Q9ULW3 272 aaKnown RBP12.69□□□□□ -0.38
TRIM35-204ENST00000521283 ARHGAP33O14559 1287 aa12.68□□□□□ -0.38
TRIM35-204ENST00000521283 BCAR3O75815 825 aa12.68□□□□□ -0.38
TRIM35-204ENST00000521283 GNAI2P04899 355 aa12.68□□□□□ -0.38
TRIM35-204ENST00000521283 IL15P40933 162 aaPredicted RBP12.68□□□□□ -0.38
TRIM35-204ENST00000521283 FKBP1BP68106 108 aa12.68□□□□□ -0.38
TRIM35-204ENST00000521283 HTRA3P83110 453 aa12.68□□□□□ -0.38
TRIM35-204ENST00000521283 PTPN12Q05209 780 aaKnown RBP12.68□□□□□ -0.38
TRIM35-204ENST00000521283 MTX1Q13505 466 aa12.68□□□□□ -0.38
TRIM35-204ENST00000521283 SCARF1Q14162 830 aa12.68□□□□□ -0.38
TRIM35-204ENST00000521283 RBM26Q5T8P6 1007 aaKnown RBP12.68□□□□□ -0.38
TRIM35-204ENST00000521283 FTSJ3Q8IY81 847 aaKnown RBP12.68□□□□□ -0.38
TRIM35-204ENST00000521283 MTMR14Q8NCE2 650 aa12.68□□□□□ -0.38
TRIM35-204ENST00000521283 TDRD7Q8NHU6 1098 aaKnown RBP12.68□□□□□ -0.38
TRIM35-204ENST00000521283 LPIN2Q92539 896 aa12.68□□□□□ -0.38
TRIM35-204ENST00000521283 COPRSQ9NQ92 184 aa12.68□□□□□ -0.38
TRIM35-204ENST00000521283 CEP126Q9P2H0 1117 aa12.68□□□□□ -0.38
TRIM35-204ENST00000521283 TLL2Q9Y6L7 1015 aa12.68□□□□□ -0.38
TRIM35-204ENST00000521283 ZNF646O15015 1829 aaPredicted RBP12.67□□□□□ -0.38
TRIM35-204ENST00000521283 WTIPA6NIX2 430 aaPredicted RBP12.67□□□□□ -0.38
TRIM35-204ENST00000521283 MYO1BO43795 1136 aa12.67□□□□□ -0.38
TRIM35-204ENST00000521283 CELF2O95319 508 aaKnown RBP12.67□□□□□ -0.38
TRIM35-204ENST00000521283 SLC5A1P13866 664 aa12.67□□□□□ -0.38
TRIM35-204ENST00000521283 RFX5P48382 616 aaPredicted RBP12.67□□□□□ -0.38
TRIM35-204ENST00000521283 VGLL2Q8N8G2 317 aa12.67□□□□□ -0.38
TRIM35-204ENST00000521283 C2orf69Q8N8R5 385 aa12.67□□□□□ -0.38
TRIM35-204ENST00000521283 FAM84BQ96KN1 310 aaPredicted RBP12.67□□□□□ -0.38
TRIM35-204ENST00000521283 GLIS2Q9BZE0 524 aaPredicted RBP12.67□□□□□ -0.38
TRIM35-204ENST00000521283 PUS3Q9BZE2 481 aaKnown RBP12.67□□□□□ -0.38
TRIM35-204ENST00000521283 CHMP4BQ9H444 224 aaKnown RBP12.67□□□□□ -0.38
TRIM35-204ENST00000521283 SUGT1Q9Y2Z0 365 aa12.67□□□□□ -0.38
TRIM35-204ENST00000521283 LRRFIP2Q9Y608 721 aaKnown RBP12.67□□□□□ -0.38
TRIM35-204ENST00000521283 FRAT2O75474 233 aaPredicted RBP12.66□□□□□ -0.38
TRIM35-204ENST00000521283 KLRK1P26718 216 aa12.66□□□□□ -0.38
TRIM35-204ENST00000521283 MAP2K1Q02750 393 aaPredicted RBP12.66□□□□□ -0.38
TRIM35-204ENST00000521283 LRRC24Q50LG9 513 aa12.66□□□□□ -0.38
TRIM35-204ENST00000521283 CST9Q5W186 159 aa12.66□□□□□ -0.38
TRIM35-204ENST00000521283 FBXO33Q7Z6M2 555 aa12.66□□□□□ -0.38
TRIM35-204ENST00000521283 SAPCD2Q86UD0 394 aa12.66□□□□□ -0.38
TRIM35-204ENST00000521283 USP48Q86UV5 1035 aa12.66□□□□□ -0.38
TRIM35-204ENST00000521283 APOBEC3FQ8IUX4 373 aaKnown RBP12.66□□□□□ -0.38
TRIM35-204ENST00000521283 DZIP1LQ8IYY4 767 aaKnown RBP12.66□□□□□ -0.38
TRIM35-204ENST00000521283 MEIS3Q99687 375 aa12.66□□□□□ -0.38
TRIM35-204ENST00000521283 MRIQ9BWK5 157 aa12.66□□□□□ -0.38
TRIM35-204ENST00000521283 GNL3LQ9NVN8 582 aaKnown RBP12.66□□□□□ -0.38
TRIM35-204ENST00000521283 GGA3Q9NZ52 723 aa12.66□□□□□ -0.38
TRIM35-204ENST00000521283 MKRN1Q9UHC7 482 aaKnown RBP12.66□□□□□ -0.38
TRIM35-204ENST00000521283 AKAP2Q9Y2D5 859 aa12.66□□□□□ -0.38
TRIM35-204ENST00000521283 COL1A1P02452 1464 aaPredicted RBP12.65□□□□□ -0.38
TRIM35-204ENST00000521283 SHTN1A0MZ66 631 aa12.65□□□□□ -0.38
TRIM35-204ENST00000521283 TRAF5O00463 557 aa12.65□□□□□ -0.38
TRIM35-204ENST00000521283 WNT10BO00744 389 aa12.65□□□□□ -0.38
TRIM35-204ENST00000521283 SRGAP3O43295 1099 aa12.65□□□□□ -0.38
TRIM35-204ENST00000521283 FGFR2P21802 821 aa12.65□□□□□ -0.38
TRIM35-204ENST00000521283 NF2P35240 595 aa12.65□□□□□ -0.38
TRIM35-204ENST00000521283 MAP2K2P36507 400 aa12.65□□□□□ -0.38
TRIM35-204ENST00000521283 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
TRIM35-204ENST00000521283 DLGAP5Q15398 846 aa12.65□□□□□ -0.38
TRIM35-204ENST00000521283 ANGEL2Q5VTE6 544 aaKnown RBP12.65□□□□□ -0.38
TRIM35-204ENST00000521283 KIAA0825Q8IV33 1275 aa12.65□□□□□ -0.38
TRIM35-204ENST00000521283 PPP2R3BQ9Y5P8 575 aa12.65□□□□□ -0.38
TRIM35-204ENST00000521283 ECM29Q5VYK3 1845 aa12.65□□□□□ -0.39
TRIM35-204ENST00000521283 MAST3O60307 1309 aa12.64□□□□□ -0.39
TRIM35-204ENST00000521283 SNAP23O00161 211 aa12.64□□□□□ -0.39
TRIM35-204ENST00000521283 SEMA3EO15041 775 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms