RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 ALDH1L1O75891 902 aa20.78■□□□□ 0.92
TRAM1-204ENST00000521049 CRKP46108 304 aa20.78■□□□□ 0.92
TRAM1-204ENST00000521049 NBPF11Q86T75 865 aa20.78■□□□□ 0.92
TRAM1-204ENST00000521049 ZNF333Q96JL9 665 aa20.78■□□□□ 0.92
TRAM1-204ENST00000521049 HTTP42858 3142 aa20.77■□□□□ 0.92
TRAM1-204ENST00000521049 CCL15-CCL14A0A0B4J2E2 113 aa20.77■□□□□ 0.92
TRAM1-204ENST00000521049 TCP10L2B9ZVM9 353 aa20.77■□□□□ 0.92
TRAM1-204ENST00000521049 HDLBPQ00341 1268 aaKnown RBP20.77■□□□□ 0.92
TRAM1-204ENST00000521049 VGLL4Q14135 290 aa20.77■□□□□ 0.92
TRAM1-204ENST00000521049 TAF1CQ15572 869 aaPredicted RBP20.77■□□□□ 0.92
TRAM1-204ENST00000521049 CCL15Q16663 113 aa20.77■□□□□ 0.92
TRAM1-204ENST00000521049 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRAM1-204ENST00000521049 TMEM39BQ9GZU3 492 aa20.77■□□□□ 0.92
TRAM1-204ENST00000521049 CSADQ9Y600 493 aa20.77■□□□□ 0.92
TRAM1-204ENST00000521049 FBXO33Q7Z6M2 555 aa20.76■□□□□ 0.91
TRAM1-204ENST00000521049 CDAN1Q8IWY9 1227 aa20.76■□□□□ 0.91
TRAM1-204ENST00000521049 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
TRAM1-204ENST00000521049 RIPOR2Q9Y4F9 1068 aa20.76■□□□□ 0.91
TRAM1-204ENST00000521049 WDHD1O75717 1129 aaPredicted RBP20.75■□□□□ 0.91
TRAM1-204ENST00000521049 MRIQ9BWK5 157 aa20.75■□□□□ 0.91
TRAM1-204ENST00000521049 PUS3Q9BZE2 481 aaKnown RBP20.75■□□□□ 0.91
TRAM1-204ENST00000521049 MROH5Q6ZUA9 1318 aa20.75■□□□□ 0.91
TRAM1-204ENST00000521049 LAMB1P07942 1786 aa20.74■□□□□ 0.91
TRAM1-204ENST00000521049 SLC9C1Q4G0N8 1177 aa20.74■□□□□ 0.91
TRAM1-204ENST00000521049 PPP4R3CPQ6ZMV5 832 aa20.74■□□□□ 0.91
TRAM1-204ENST00000521049 FAM43AQ8N2R8 423 aa20.74■□□□□ 0.91
TRAM1-204ENST00000521049 TBC1D22AQ8WUA7 517 aa20.74■□□□□ 0.91
TRAM1-204ENST00000521049 SRCIN1Q9C0H9 1055 aa20.74■□□□□ 0.91
TRAM1-204ENST00000521049 ZCCHC17Q9NP64 241 aaKnown RBP20.74■□□□□ 0.91
TRAM1-204ENST00000521049 PTCH2Q9Y6C5 1203 aa20.74■□□□□ 0.91
TRAM1-204ENST00000521049 ECM29Q5VYK3 1845 aa20.74■□□□□ 0.91
TRAM1-204ENST00000521049 MKI67P46013 3256 aaKnown RBP20.73■□□□□ 0.91
TRAM1-204ENST00000521049 SPDYE5A6NIY4 337 aa20.73■□□□□ 0.91
TRAM1-204ENST00000521049 VPS37DQ86XT2 251 aa20.73■□□□□ 0.91
TRAM1-204ENST00000521049 OTUD5Q96G74 571 aa20.73■□□□□ 0.91
TRAM1-204ENST00000521049 KAZALD1Q96I82 304 aa20.73■□□□□ 0.91
TRAM1-204ENST00000521049 TLR2O60603 784 aa20.72■□□□□ 0.91
TRAM1-204ENST00000521049 CETPP11597 493 aa20.72■□□□□ 0.91
TRAM1-204ENST00000521049 GRIK5Q16478 980 aa20.72■□□□□ 0.91
TRAM1-204ENST00000521049 SLC4A10Q6U841 1118 aa20.72■□□□□ 0.91
TRAM1-204ENST00000521049 ERO1BQ86YB8 467 aa20.72■□□□□ 0.91
TRAM1-204ENST00000521049 HOOK2Q96ED9 719 aa20.72■□□□□ 0.91
TRAM1-204ENST00000521049 SUCLG2Q96I99 432 aa20.72■□□□□ 0.91
TRAM1-204ENST00000521049 SALL2Q9Y467 1007 aaPredicted RBP20.72■□□□□ 0.91
TRAM1-204ENST00000521049 GNRH1P01148 92 aa20.71■□□□□ 0.91
TRAM1-204ENST00000521049 SLC4A8Q2Y0W8 1093 aa20.71■□□□□ 0.91
TRAM1-204ENST00000521049 CAVIN4Q5BKX8 364 aa20.71■□□□□ 0.91
TRAM1-204ENST00000521049 FKBP1CQ5VVH2 108 aa20.71■□□□□ 0.91
TRAM1-204ENST00000521049 FAM83AQ86UY5 434 aa20.71■□□□□ 0.91
TRAM1-204ENST00000521049 TEKT1Q969V4 418 aa20.71■□□□□ 0.91
TRAM1-204ENST00000521049 CACNA1FO60840 1977 aa20.71■□□□□ 0.91
TRAM1-204ENST00000521049 KIF22Q14807 665 aa20.7■□□□□ 0.9
TRAM1-204ENST00000521049 ZDHHC15Q96MV8 337 aa20.7■□□□□ 0.9
TRAM1-204ENST00000521049 SPINK5Q9NQ38 1064 aaPredicted RBP20.7■□□□□ 0.9
TRAM1-204ENST00000521049 SNCAIPQ9Y6H5 919 aa20.7■□□□□ 0.9
TRAM1-204ENST00000521049 UTYO14607 1347 aa20.7■□□□□ 0.9
TRAM1-204ENST00000521049 KIAA0100Q14667 2235 aaKnown RBP20.7■□□□□ 0.9
TRAM1-204ENST00000521049 BTBD19C9JJ37 291 aa20.69■□□□□ 0.9
TRAM1-204ENST00000521049 FRAT2O75474 233 aaPredicted RBP20.69■□□□□ 0.9
TRAM1-204ENST00000521049 NBPF7P0C2Y1 421 aaPredicted RBP20.69■□□□□ 0.9
TRAM1-204ENST00000521049 PRMT2P55345 433 aa20.69■□□□□ 0.9
TRAM1-204ENST00000521049 CHAF1AQ13111 956 aaPredicted RBP20.69■□□□□ 0.9
TRAM1-204ENST00000521049 SNAPC2Q13487 334 aa20.69■□□□□ 0.9
TRAM1-204ENST00000521049 TMOD2Q9NZR1 351 aa20.69■□□□□ 0.9
TRAM1-204ENST00000521049 IQSEC3Q9UPP2 1182 aaPredicted RBP20.69■□□□□ 0.9
TRAM1-204ENST00000521049 SUGT1Q9Y2Z0 365 aa20.69■□□□□ 0.9
TRAM1-204ENST00000521049 IRF6O14896 467 aa20.68■□□□□ 0.9
TRAM1-204ENST00000521049 PDE8BO95263 885 aa20.68■□□□□ 0.9
TRAM1-204ENST00000521049 FXR1P51114 621 aaKnown RBP eCLIP20.68■□□□□ 0.9
TRAM1-204ENST00000521049 CACNB3P54284 484 aa20.68■□□□□ 0.9
TRAM1-204ENST00000521049 LACTBP83111 547 aaPredicted RBP20.68■□□□□ 0.9
TRAM1-204ENST00000521049 RABL6Q3YEC7 729 aaPredicted RBP20.68■□□□□ 0.9
TRAM1-204ENST00000521049 APOBEC3HQ6NTF7 200 aaKnown RBP20.68■□□□□ 0.9
TRAM1-204ENST00000521049 WRNIP1Q96S55 665 aa20.68■□□□□ 0.9
TRAM1-204ENST00000521049 MRS2Q9HD23 443 aa20.68■□□□□ 0.9
TRAM1-204ENST00000521049 CENPFP49454 3210 aa20.68■□□□□ 0.9
TRAM1-204ENST00000521049 A0A1B0GUL6 1792 aa20.67■□□□□ 0.9
TRAM1-204ENST00000521049 RBBP6Q7Z6E9 1792 aaKnown RBP20.67■□□□□ 0.9
TRAM1-204ENST00000521049 PPIL2Q13356 520 aa20.67■□□□□ 0.9
TRAM1-204ENST00000521049 LRRC24Q50LG9 513 aa20.67■□□□□ 0.9
TRAM1-204ENST00000521049 METTL24Q5JXM2 366 aa20.67■□□□□ 0.9
TRAM1-204ENST00000521049 HHIPL2Q6UWX4 724 aa20.67■□□□□ 0.9
TRAM1-204ENST00000521049 ZKSCAN4Q969J2 545 aaPredicted RBP20.67■□□□□ 0.9
TRAM1-204ENST00000521049 BICC1Q9H694 974 aaKnown RBP20.67■□□□□ 0.9
TRAM1-204ENST00000521049 PPATQ06203 517 aa20.66■□□□□ 0.9
TRAM1-204ENST00000521049 DCAF15Q66K64 600 aa20.66■□□□□ 0.9
TRAM1-204ENST00000521049 VGLL2Q8N8G2 317 aa20.66■□□□□ 0.9
TRAM1-204ENST00000521049 ARHGAP39Q9C0H5 1083 aa20.66■□□□□ 0.9
TRAM1-204ENST00000521049 COLQQ9Y215 455 aaPredicted RBP20.66■□□□□ 0.9
TRAM1-204ENST00000521049 MAST3O60307 1309 aa20.66■□□□□ 0.9
TRAM1-204ENST00000521049 BCAMP50895 628 aa20.65■□□□□ 0.9
TRAM1-204ENST00000521049 C17orf99Q6UX52 265 aa20.65■□□□□ 0.9
TRAM1-204ENST00000521049 SH3TC2Q8TF17 1288 aa20.65■□□□□ 0.9
TRAM1-204ENST00000521049 KIF16BQ96L93 1317 aa20.64■□□□□ 0.89
TRAM1-204ENST00000521049 ANKRD44Q8N8A2 993 aa20.64■□□□□ 0.89
TRAM1-204ENST00000521049 ZNF341Q9BYN7 854 aa20.64■□□□□ 0.89
TRAM1-204ENST00000521049 OTOFQ9HC10 1997 aa20.63■□□□□ 0.89
TRAM1-204ENST00000521049 MYCP01106 439 aaPredicted RBP20.62■□□□□ 0.89
TRAM1-204ENST00000521049 IFIT1P09914 478 aaKnown RBP20.62■□□□□ 0.89
TRAM1-204ENST00000521049 FGFR2P21802 821 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms