RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 BRAPQ7Z569 592 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 NFATC2IPQ8NCF5 419 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 ZNF274Q96GC6 653 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 ITSN1Q15811 1721 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 RHOXF2BP0C7M4 288 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 ZC3H6P61129 1189 aaKnown RBP14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 ZNF594Q96JF6 807 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 MPHOSPH8Q99549 860 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 RHOXF2Q9BQY4 288 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 RASSF4Q9H2L5 321 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 RSPH14Q9UHP6 348 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 ZNF213O14771 459 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 WDR24Q96S15 920 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 METTL22Q9BUU2 404 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 PARD6BQ9BYG5 372 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 CEP126Q9P2H0 1117 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 ADGRL3Q9HAR2 1447 aa14.73□□□□□ -0.05
TRAPPC9-208ENST00000520857 RNF113AO15541 343 aaKnown RBP14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 CERS3Q8IU89 383 aa14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 ANKRD24Q8TF21 1146 aa14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 PHKBQ93100 1093 aa14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 COPRSQ9NQ92 184 aa14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 KCNA6P17658 529 aa14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 GPR161Q8N6U8 529 aaKnown RBP14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 HELLSQ9NRZ9 838 aa14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 KIF5CO60282 957 aa14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 ERLIN1O75477 346 aa14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 CMA1P23946 247 aa14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 SAFBQ15424 915 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 CC2D1AQ6P1N0 951 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 ILDR1Q86SU0 546 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 DHX58Q96C10 678 aa14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 NFE2L3Q9Y4A8 694 aa14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 ERBB3P21860 1342 aa14.72□□□□□ -0.05
TRAPPC9-208ENST00000520857 COL15A1P39059 1388 aa14.71□□□□□ -0.05
TRAPPC9-208ENST00000520857 GOLGA6L9A6NEM1 432 aa14.71□□□□□ -0.05
TRAPPC9-208ENST00000520857 FDPSP14324 419 aaKnown RBP14.71□□□□□ -0.05
TRAPPC9-208ENST00000520857 METAP2P50579 478 aaKnown RBP eCLIP14.71□□□□□ -0.05
TRAPPC9-208ENST00000520857 NCOA7Q8NI08 942 aa14.71□□□□□ -0.05
TRAPPC9-208ENST00000520857 DSCC1Q9BVC3 393 aa14.71□□□□□ -0.05
TRAPPC9-208ENST00000520857 STX17P56962 302 aa14.71□□□□□ -0.05
TRAPPC9-208ENST00000520857 RRP12Q5JTH9 1297 aaKnown RBP14.71□□□□□ -0.05
TRAPPC9-208ENST00000520857 ZNF790Q6PG37 636 aa14.71□□□□□ -0.05
TRAPPC9-208ENST00000520857 PCDHA5Q9Y5H7 936 aa14.71□□□□□ -0.05
TRAPPC9-208ENST00000520857 EIF3JO75822 258 aaKnown RBP14.71□□□□□ -0.06
TRAPPC9-208ENST00000520857 VPS37DQ86XT2 251 aa14.71□□□□□ -0.06
TRAPPC9-208ENST00000520857 IRX2Q9BZI1 471 aaPredicted RBP14.71□□□□□ -0.06
TRAPPC9-208ENST00000520857 POLR3EQ9NVU0 708 aa14.71□□□□□ -0.06
TRAPPC9-208ENST00000520857 PEAK1Q9H792 1746 aa14.71□□□□□ -0.06
TRAPPC9-208ENST00000520857 CHMP4BP1P59074 171 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 PARP3Q9Y6F1 533 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 MAST3O60307 1309 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 KIF28PB7ZC32 967 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 LONRF2Q1L5Z9 754 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 KCNH5Q8NCM2 988 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 KCNH3Q9ULD8 1083 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 WDHD1O75717 1129 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 FAM193AP78312 1265 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 CCDC93Q567U6 631 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 NOM1Q5C9Z4 860 aaKnown RBP14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 ZNF569Q5MCW4 686 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 TOGARAM2Q6ZUX3 1019 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 VSTM4Q8IW00 320 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 ZNF496Q96IT1 587 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 MYL10Q9BUA6 226 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 ZBTB3Q9H5J0 574 aa14.7□□□□□ -0.06
TRAPPC9-208ENST00000520857 IKBKBO14920 756 aa14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 TRIM66O15016 1216 aa14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 CCDC175P0C221 793 aa14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 PDE11AQ9HCR9 933 aa14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 C3P01024 1663 aa14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 A0A1B0GUL7 405 aa14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 IARSP41252 1262 aaKnown RBP14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 EXOSC10Q01780 885 aaKnown RBP14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 NCAPHQ15003 741 aa14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 KRT40Q6A162 431 aa14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 SLC26A6Q9BXS9 759 aa14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 ADAM21Q9UKJ8 722 aa14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 CEMIPQ8WUJ3 1361 aa14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 IDH1O75874 414 aaKnown RBP14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 SASH3O75995 380 aa14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 KIF23Q02241 960 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC9-208ENST00000520857 CDKL5O76039 1030 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 TBC1D8O95759 1140 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 AKAP17AQ02040 695 aaKnown RBP14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 FEZ2Q9UHY8 353 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 M0R2C6 588 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 SLC39A14Q15043 492 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 ZMYM1Q5SVZ6 1142 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 SPECC1LQ69YQ0 1117 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 REXO1L1PQ8IX06 675 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 DACH1Q9UI36 760 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 VWA3AA6NCI4 1184 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 FGAP02671 866 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 LONRF3Q496Y0 759 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 LRRC24Q50LG9 513 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 WWC2Q6AWC2 1192 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 TRIM65Q6PJ69 517 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 OSBP2Q969R2 916 aa14.68□□□□□ -0.06
TRAPPC9-208ENST00000520857 MON2Q7Z3U7 1717 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms