RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 SNCAIPQ9Y6H5 919 aa10.33□□□□□ -0.76
CSMD1-209ENST00000520630 DOCK1Q14185 1865 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 SPDYE5A6NIY4 337 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 ZNF853P0CG23 659 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 IL1R1P14778 569 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 GRK4P32298 578 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 GTF2A2P52657 109 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 CASP7P55210 303 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 MOGSQ13724 837 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 RALBP1Q15311 655 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 NEUROD2Q15784 382 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 C15orf52Q6ZUT6 534 aaKnown RBP10.32□□□□□ -0.76
CSMD1-209ENST00000520630 TMEM39BQ9GZU3 492 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 UNC93B1Q9H1C4 597 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 TDRD3Q9H7E2 651 aaKnown RBP10.32□□□□□ -0.76
CSMD1-209ENST00000520630 MBIPQ9NS73 344 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 ZNF70Q9UC06 446 aaPredicted RBP10.32□□□□□ -0.76
CSMD1-209ENST00000520630 RIPOR2Q9Y4F9 1068 aa10.32□□□□□ -0.76
CSMD1-209ENST00000520630 MAST2Q6P0Q8 1798 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 H7C1W4 665 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 IRF6O14896 467 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 TAF5LO75529 589 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 GNRH1P01148 92 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 PSMC4P43686 418 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 PRMT2P55345 433 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 FKBP1AP62942 108 aaKnown RBP10.31□□□□□ -0.76
CSMD1-209ENST00000520630 MAP3K9P80192 1104 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 CHRNDQ07001 517 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 ARHGEF6Q15052 776 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 GRIK5Q16478 980 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 CCDC184Q52MB2 194 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 GPR153Q6NV75 609 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 CCDC146Q8IYE0 955 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 DEFB123Q8N688 67 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 U2AF1L4Q8WU68 220 aaKnown RBP10.31□□□□□ -0.76
CSMD1-209ENST00000520630 HTATIP2Q9BUP3 242 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 RNF208Q9H0X6 261 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 CPA4Q9UI42 421 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 GABRQQ9UN88 632 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 STXBP5LQ9Y2K9 1186 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 REV3LO60673 3130 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 MYO9BQ13459 2157 aa10.31□□□□□ -0.76
CSMD1-209ENST00000520630 FARP2O94887 1054 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-209ENST00000520630 SGPL1O95470 568 aa10.3□□□□□ -0.76
CSMD1-209ENST00000520630 CSF1RP07333 972 aa10.3□□□□□ -0.76
CSMD1-209ENST00000520630 HSP90B1P14625 803 aaKnown RBP10.3□□□□□ -0.76
CSMD1-209ENST00000520630 ITGA6P23229 1130 aa10.3□□□□□ -0.76
CSMD1-209ENST00000520630 BMP8BP34820 402 aa10.3□□□□□ -0.76
CSMD1-209ENST00000520630 GOLGA2Q08379 1002 aa10.3□□□□□ -0.76
CSMD1-209ENST00000520630 CWF19L2Q2TBE0 894 aaKnown RBP10.3□□□□□ -0.76
CSMD1-209ENST00000520630 HELBQ8NG08 1087 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-209ENST00000520630 ZKSCAN4Q969J2 545 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-209ENST00000520630 PNNQ9H307 717 aaKnown RBP10.3□□□□□ -0.76
CSMD1-209ENST00000520630 ZCCHC17Q9NP64 241 aaKnown RBP10.3□□□□□ -0.76
CSMD1-209ENST00000520630 MAP3K2Q9Y2U5 619 aa10.3□□□□□ -0.76
CSMD1-209ENST00000520630 NR2E3Q9Y5X4 410 aa10.3□□□□□ -0.76
CSMD1-209ENST00000520630 TTC28Q96AY4 2481 aa10.3□□□□□ -0.76
CSMD1-209ENST00000520630 MYBBP1AQ9BQG0 1328 aaKnown RBP10.3□□□□□ -0.76
CSMD1-209ENST00000520630 COL2A1P02458 1487 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-209ENST00000520630 LOC285556D6RIA3 1793 aa10.29□□□□□ -0.76
CSMD1-209ENST00000520630 RLFQ13129 1914 aa10.29□□□□□ -0.76
CSMD1-209ENST00000520630 TCP10L2B9ZVM9 353 aa10.29□□□□□ -0.76
CSMD1-209ENST00000520630 ELL2O00472 640 aaPredicted RBP10.29□□□□□ -0.76
CSMD1-209ENST00000520630 BCAMP50895 628 aa10.29□□□□□ -0.76
CSMD1-209ENST00000520630 PRKCZQ05513 592 aa10.29□□□□□ -0.76
CSMD1-209ENST00000520630 LMOD3Q0VAK6 560 aa10.29□□□□□ -0.76
CSMD1-209ENST00000520630 C8orf58Q8NAV2 365 aa10.29□□□□□ -0.76
CSMD1-209ENST00000520630 NKX2-3Q8TAU0 364 aa10.29□□□□□ -0.76
CSMD1-209ENST00000520630 DIS3LQ8TF46 1054 aaKnown RBP10.29□□□□□ -0.76
CSMD1-209ENST00000520630 PLA2G12BQ9BX93 195 aa10.29□□□□□ -0.76
CSMD1-209ENST00000520630 MYPNQ86TC9 1320 aa10.29□□□□□ -0.76
CSMD1-209ENST00000520630 CDK5RAP2Q96SN8 1893 aa10.28□□□□□ -0.76
CSMD1-209ENST00000520630 NEURL1BA8MQ27 555 aa10.28□□□□□ -0.76
CSMD1-209ENST00000520630 MYO1BO43795 1136 aa10.28□□□□□ -0.76
CSMD1-209ENST00000520630 BCRP11274 1271 aa10.28□□□□□ -0.76
CSMD1-209ENST00000520630 CETPP11597 493 aa10.28□□□□□ -0.76
CSMD1-209ENST00000520630 KIF22Q14807 665 aa10.28□□□□□ -0.76
CSMD1-209ENST00000520630 ANKRD2Q9GZV1 360 aa10.28□□□□□ -0.76
CSMD1-209ENST00000520630 CRISPLD2Q9H0B8 497 aa10.28□□□□□ -0.76
CSMD1-209ENST00000520630 FAM205AQ6ZU69 1335 aa10.28□□□□□ -0.76
CSMD1-209ENST00000520630 PI4KAP2A4QPH2 592 aa10.27□□□□□ -0.77
CSMD1-209ENST00000520630 EVI5O60447 810 aa10.27□□□□□ -0.77
CSMD1-209ENST00000520630 IGHMBP2P38935 993 aaKnown RBP10.27□□□□□ -0.77
CSMD1-209ENST00000520630 CACNB3P54284 484 aa10.27□□□□□ -0.77
CSMD1-209ENST00000520630 PPIL2Q13356 520 aa10.27□□□□□ -0.77
CSMD1-209ENST00000520630 LRIT3Q3SXY7 679 aa10.27□□□□□ -0.77
CSMD1-209ENST00000520630 G2E3Q7L622 706 aa10.27□□□□□ -0.77
CSMD1-209ENST00000520630 UBE3BQ7Z3V4 1068 aa10.27□□□□□ -0.77
CSMD1-209ENST00000520630 ERO1BQ86YB8 467 aa10.27□□□□□ -0.77
CSMD1-209ENST00000520630 DZIP1LQ8IYY4 767 aaKnown RBP10.27□□□□□ -0.77
CSMD1-209ENST00000520630 PI4KAP1Q8N8J0 262 aa10.27□□□□□ -0.77
CSMD1-209ENST00000520630 RAET1EQ8TD07 263 aa10.27□□□□□ -0.77
CSMD1-209ENST00000520630 PAWRQ96IZ0 340 aaKnown RBP10.27□□□□□ -0.77
CSMD1-209ENST00000520630 PAK6Q9NQU5 681 aaPredicted RBP10.27□□□□□ -0.77
CSMD1-209ENST00000520630 ELNP15502 786 aa10.26□□□□□ -0.77
CSMD1-209ENST00000520630 RBM5P52756 815 aaKnown RBP eCLIP10.26□□□□□ -0.77
CSMD1-209ENST00000520630 GPAT2Q6NUI2 795 aa10.26□□□□□ -0.77
CSMD1-209ENST00000520630 KSR2Q6VAB6 950 aa10.26□□□□□ -0.77
CSMD1-209ENST00000520630 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.26□□□□□ -0.77
CSMD1-209ENST00000520630 TSPYL6Q8N831 410 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms