RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 POLA2Q14181 598 aa15.2■□□□□ 0.02
MRPS28-202ENST00000518271 CDAN1Q8IWY9 1227 aa15.2■□□□□ 0.02
MRPS28-202ENST00000518271 DZIP1LQ8IYY4 767 aaKnown RBP15.2■□□□□ 0.02
MRPS28-202ENST00000518271 TBC1D22AQ8WUA7 517 aa15.2■□□□□ 0.02
MRPS28-202ENST00000518271 C1orf115Q9H7X2 142 aa15.2■□□□□ 0.02
MRPS28-202ENST00000518271 HDLBPQ00341 1268 aaKnown RBP15.19■□□□□ 0.02
MRPS28-202ENST00000518271 TFCP2Q12800 502 aa15.19■□□□□ 0.02
MRPS28-202ENST00000518271 TDRD3Q9H7E2 651 aaKnown RBP15.19■□□□□ 0.02
MRPS28-202ENST00000518271 VEZTQ9HBM0 779 aa15.19■□□□□ 0.02
MRPS28-202ENST00000518271 ZNF70Q9UC06 446 aaPredicted RBP15.19■□□□□ 0.02
MRPS28-202ENST00000518271 TSKSQ9UJT2 592 aa15.19■□□□□ 0.02
MRPS28-202ENST00000518271 MAST2Q6P0Q8 1798 aa15.19■□□□□ 0.02
MRPS28-202ENST00000518271 ZBTB7BO15156 539 aaPredicted RBP15.18■□□□□ 0.02
MRPS28-202ENST00000518271 RBM5P52756 815 aaKnown RBP eCLIP15.18■□□□□ 0.02
MRPS28-202ENST00000518271 KIF23Q02241 960 aaPredicted RBP15.18■□□□□ 0.02
MRPS28-202ENST00000518271 LDLRAD1Q5T700 205 aa15.18■□□□□ 0.02
MRPS28-202ENST00000518271 PANK1Q8TE04 598 aa15.18■□□□□ 0.02
MRPS28-202ENST00000518271 SSH3Q8TE77 659 aa15.18■□□□□ 0.02
MRPS28-202ENST00000518271 CCDC102AQ96A19 550 aa15.18■□□□□ 0.02
MRPS28-202ENST00000518271 TEPSINQ96N21 525 aa15.18■□□□□ 0.02
MRPS28-202ENST00000518271 SUGT1Q9Y2Z0 365 aa15.18■□□□□ 0.02
MRPS28-202ENST00000518271 PPP2R3BQ9Y5P8 575 aa15.18■□□□□ 0.02
MRPS28-202ENST00000518271 DOCK2Q92608 1830 aa15.17■□□□□ 0.02
MRPS28-202ENST00000518271 A0A1B0GUL7 405 aa15.17■□□□□ 0.02
MRPS28-202ENST00000518271 FRAT2O75474 233 aaPredicted RBP15.17■□□□□ 0.02
MRPS28-202ENST00000518271 PRDX5P30044 214 aa15.17■□□□□ 0.02
MRPS28-202ENST00000518271 TIMM10P62072 90 aa15.17■□□□□ 0.02
MRPS28-202ENST00000518271 RASGRF1Q13972 1273 aa15.17■□□□□ 0.02
MRPS28-202ENST00000518271 RASA3Q14644 834 aa15.17■□□□□ 0.02
MRPS28-202ENST00000518271 MAP3K11Q16584 847 aa15.17■□□□□ 0.02
MRPS28-202ENST00000518271 NBPF12Q5TAG4 269 aaPredicted RBP15.17■□□□□ 0.02
MRPS28-202ENST00000518271 CCDC102BQ68D86 513 aa15.17■□□□□ 0.02
MRPS28-202ENST00000518271 APOBEC3HQ6NTF7 200 aaKnown RBP15.17■□□□□ 0.02
MRPS28-202ENST00000518271 ITPRIPQ8IWB1 547 aa15.17■□□□□ 0.02
MRPS28-202ENST00000518271 FTSJ3Q8IY81 847 aaKnown RBP15.17■□□□□ 0.02
MRPS28-202ENST00000518271 SALL1Q9NSC2 1324 aa15.17■□□□□ 0.02
MRPS28-202ENST00000518271 CDK5RAP2Q96SN8 1893 aa15.16■□□□□ 0.02
MRPS28-202ENST00000518271 MYO1BO43795 1136 aa15.16■□□□□ 0.02
MRPS28-202ENST00000518271 PRKG1Q13976 671 aa15.16■□□□□ 0.02
MRPS28-202ENST00000518271 TNS4Q8IZW8 715 aa15.16■□□□□ 0.02
MRPS28-202ENST00000518271 WDR66Q8TBY9 1149 aa15.16■□□□□ 0.02
MRPS28-202ENST00000518271 TEKT1Q969V4 418 aa15.16■□□□□ 0.02
MRPS28-202ENST00000518271 ZDHHC15Q96MV8 337 aa15.16■□□□□ 0.02
MRPS28-202ENST00000518271 MRIQ9BWK5 157 aa15.16■□□□□ 0.02
MRPS28-202ENST00000518271 HTTP42858 3142 aa15.16■□□□□ 0.02
MRPS28-202ENST00000518271 PDS5AQ29RF7 1337 aaKnown RBP15.16■□□□□ 0.02
MRPS28-202ENST00000518271 AK9Q5TCS8 1911 aa15.15■□□□□ 0.02
MRPS28-202ENST00000518271 SEMA3EO15041 775 aa15.15■□□□□ 0.02
MRPS28-202ENST00000518271 NF2P35240 595 aa15.15■□□□□ 0.02
MRPS28-202ENST00000518271 CACNB3P54284 484 aa15.15■□□□□ 0.02
MRPS28-202ENST00000518271 ATP8B2P98198 1209 aa15.15■□□□□ 0.02
MRPS28-202ENST00000518271 TTLL12Q14166 644 aaPredicted RBP15.15■□□□□ 0.02
MRPS28-202ENST00000518271 DIXDC1Q155Q3 683 aa15.15■□□□□ 0.02
MRPS28-202ENST00000518271 HHIPL2Q6UWX4 724 aa15.15■□□□□ 0.02
MRPS28-202ENST00000518271 XAGE2Q96GT9 111 aa15.15■□□□□ 0.02
MRPS28-202ENST00000518271 CSRNP1Q96S65 589 aa15.15■□□□□ 0.02
MRPS28-202ENST00000518271 ANGEL1Q9UNK9 670 aaKnown RBP15.15■□□□□ 0.02
MRPS28-202ENST00000518271 DAGLAQ9Y4D2 1042 aa15.15■□□□□ 0.02
MRPS28-202ENST00000518271 MAST3O60307 1309 aa15.15■□□□□ 0.02
MRPS28-202ENST00000518271 RFX7Q2KHR2 1363 aa15.14■□□□□ 0.01
MRPS28-202ENST00000518271 TCP10L2B9ZVM9 353 aa15.14■□□□□ 0.01
MRPS28-202ENST00000518271 CEP85Q6P2H3 762 aa15.14■□□□□ 0.01
MRPS28-202ENST00000518271 CLMNQ96JQ2 1002 aa15.14■□□□□ 0.01
MRPS28-202ENST00000518271 TMEM39BQ9GZU3 492 aa15.14■□□□□ 0.01
MRPS28-202ENST00000518271 DENND2AQ9ULE3 1009 aa15.14■□□□□ 0.01
MRPS28-202ENST00000518271 RPAP1Q9BWH6 1393 aaPredicted RBP15.13■□□□□ 0.01
MRPS28-202ENST00000518271 CA12O43570 354 aa15.13■□□□□ 0.01
MRPS28-202ENST00000518271 USP2O75604 605 aaPredicted RBP15.13■□□□□ 0.01
MRPS28-202ENST00000518271 TNFAIP1Q13829 316 aa15.13■□□□□ 0.01
MRPS28-202ENST00000518271 PI16Q6UXB8 463 aa15.13■□□□□ 0.01
MRPS28-202ENST00000518271 ARMC9Q7Z3E5 817 aa15.13■□□□□ 0.01
MRPS28-202ENST00000518271 BEGAINQ9BUH8 593 aa15.13■□□□□ 0.01
MRPS28-202ENST00000518271 GNL3LQ9NVN8 582 aaKnown RBP15.13■□□□□ 0.01
MRPS28-202ENST00000518271 AKAP2Q9Y2D5 859 aa15.13■□□□□ 0.01
MRPS28-202ENST00000518271 FOCADQ5VW36 1801 aa15.13■□□□□ 0.01
MRPS28-202ENST00000518271 ARID4AP29374 1257 aaPredicted RBP15.12■□□□□ 0.01
MRPS28-202ENST00000518271 ZNF384Q8TF68 577 aa15.12■□□□□ 0.01
MRPS28-202ENST00000518271 RNF186Q9NXI6 227 aa15.12■□□□□ 0.01
MRPS28-202ENST00000518271 SAGE1Q9NXZ1 904 aa15.12■□□□□ 0.01
MRPS28-202ENST00000518271 RCAN3Q9UKA8 241 aa15.12■□□□□ 0.01
MRPS28-202ENST00000518271 NOP58Q9Y2X3 529 aaKnown RBP15.12■□□□□ 0.01
MRPS28-202ENST00000518271 GAKO14976 1311 aa15.12■□□□□ 0.01
MRPS28-202ENST00000518271 GJA5P36382 358 aa15.11■□□□□ 0.01
MRPS28-202ENST00000518271 MKRN3Q13064 507 aaKnown RBP15.11■□□□□ 0.01
MRPS28-202ENST00000518271 G3BP1Q13283 466 aaKnown RBP eCLIP15.11■□□□□ 0.01
MRPS28-202ENST00000518271 MVPQ14764 893 aaKnown RBP15.11■□□□□ 0.01
MRPS28-202ENST00000518271 SUPT20HL1Q3ZLR7 823 aa15.11■□□□□ 0.01
MRPS28-202ENST00000518271 FKBP1CQ5VVH2 108 aa15.11■□□□□ 0.01
MRPS28-202ENST00000518271 SPRYD7Q5W111 196 aa15.11■□□□□ 0.01
MRPS28-202ENST00000518271 HMG20BQ9P0W2 317 aa15.11■□□□□ 0.01
MRPS28-202ENST00000518271 PPP1R12BO60237 982 aaPredicted RBP15.1■□□□□ 0.01
MRPS28-202ENST00000518271 LDHBP07195 334 aaKnown RBP15.1■□□□□ 0.01
MRPS28-202ENST00000518271 TNNI3KQ59H18 835 aa15.1■□□□□ 0.01
MRPS28-202ENST00000518271 CDC42EP5Q6NZY7 148 aa15.1■□□□□ 0.01
MRPS28-202ENST00000518271 FAM83AQ86UY5 434 aa15.1■□□□□ 0.01
MRPS28-202ENST00000518271 NEUROD6Q96NK8 337 aa15.1■□□□□ 0.01
MRPS28-202ENST00000518271 GPR108Q9NPR9 543 aa15.1■□□□□ 0.01
MRPS28-202ENST00000518271 FPGT-TNNI3KV9GXZ4 949 aa15.1■□□□□ 0.01
MRPS28-202ENST00000518271 SIPA1L1O43166 1804 aa15.1■□□□□ 0.01
MRPS28-202ENST00000518271 SURF6O75683 361 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms