RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 MAP3K11Q16584 847 aa14.04□□□□□ -0.16
IGHV3-25-201ENST00000518224 CCDC102BQ68D86 513 aa14.04□□□□□ -0.16
IGHV3-25-201ENST00000518224 HHIPL2Q6UWX4 724 aa14.04□□□□□ -0.16
IGHV3-25-201ENST00000518224 PANK1Q8TE04 598 aa14.04□□□□□ -0.16
IGHV3-25-201ENST00000518224 CCDC102AQ96A19 550 aa14.04□□□□□ -0.16
IGHV3-25-201ENST00000518224 SCAF8Q9UPN6 1271 aaKnown RBP14.04□□□□□ -0.16
IGHV3-25-201ENST00000518224 MAST3O60307 1309 aa14.04□□□□□ -0.16
IGHV3-25-201ENST00000518224 UNCXA6NJT0 531 aa14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 AOC2O75106 756 aa14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 CHAF1AQ13111 956 aaPredicted RBP14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 LDLRAD1Q5T700 205 aa14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 FKBP1CQ5VVH2 108 aa14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 PRAMEF18Q5VWM3 479 aa14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 APOBEC3HQ6NTF7 200 aaKnown RBP14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 CEP85Q6P2H3 762 aa14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 XAGE2Q96GT9 111 aa14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 PRDM10Q9NQV6 1147 aa14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 GNL3LQ9NVN8 582 aaKnown RBP14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 ZNF70Q9UC06 446 aaPredicted RBP14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 DENND2AQ9ULE3 1009 aa14.03□□□□□ -0.16
IGHV3-25-201ENST00000518224 FRAT2O75474 233 aaPredicted RBP14.02□□□□□ -0.17
IGHV3-25-201ENST00000518224 MVPQ14764 893 aaKnown RBP14.02□□□□□ -0.17
IGHV3-25-201ENST00000518224 TEKT1Q969V4 418 aa14.02□□□□□ -0.17
IGHV3-25-201ENST00000518224 TEPSINQ96N21 525 aa14.02□□□□□ -0.17
IGHV3-25-201ENST00000518224 ZIC5Q96T25 663 aa14.02□□□□□ -0.17
IGHV3-25-201ENST00000518224 ZBTB40Q9NUA8 1239 aa14.02□□□□□ -0.17
IGHV3-25-201ENST00000518224 CLRN2A0PK11 232 aa14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 CA12O43570 354 aa14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 ARID4AP29374 1257 aaPredicted RBP14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 NF2P35240 595 aa14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 CTCFP49711 727 aaPredicted RBP14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 ZNF157P51786 506 aaPredicted RBP14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 G3BP1Q13283 466 aaKnown RBP eCLIP14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 TNFAIP1Q13829 316 aa14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 RASGRF1Q13972 1273 aa14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 PDE3AQ14432 1141 aa14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 RASA3Q14644 834 aa14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 COL13A1Q5TAT6 717 aaPredicted RBP14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 RASAL3Q86YV0 1011 aa14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 TDRD3Q9H7E2 651 aaKnown RBP14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 C1orf115Q9H7X2 142 aa14.01□□□□□ -0.17
IGHV3-25-201ENST00000518224 HSPA8P11142 646 aaKnown RBP14□□□□□ -0.17
IGHV3-25-201ENST00000518224 PRDX5P30044 214 aa14□□□□□ -0.17
IGHV3-25-201ENST00000518224 PAXIP1Q6ZW49 1069 aaPredicted RBP14□□□□□ -0.17
IGHV3-25-201ENST00000518224 MOB2Q70IA6 237 aa14□□□□□ -0.17
IGHV3-25-201ENST00000518224 REM2Q8IYK8 340 aaPredicted RBP14□□□□□ -0.17
IGHV3-25-201ENST00000518224 FAM163AQ96GL9 167 aaPredicted RBP14□□□□□ -0.17
IGHV3-25-201ENST00000518224 DDX19BQ9UMR2 479 aa14□□□□□ -0.17
IGHV3-25-201ENST00000518224 LAMB1P07942 1786 aa14□□□□□ -0.17
IGHV3-25-201ENST00000518224 RPAP1Q9BWH6 1393 aaPredicted RBP13.99□□□□□ -0.17
IGHV3-25-201ENST00000518224 GAKO14976 1311 aa13.99□□□□□ -0.17
IGHV3-25-201ENST00000518224 UBE2Q2LH0YL09 131 aa13.99□□□□□ -0.17
IGHV3-25-201ENST00000518224 RBM5P52756 815 aaKnown RBP eCLIP13.99□□□□□ -0.17
IGHV3-25-201ENST00000518224 SUPT20HL1Q3ZLR7 823 aa13.99□□□□□ -0.17
IGHV3-25-201ENST00000518224 FAM83AQ86UY5 434 aa13.99□□□□□ -0.17
IGHV3-25-201ENST00000518224 ZGPATQ8N5A5 531 aaKnown RBP13.99□□□□□ -0.17
IGHV3-25-201ENST00000518224 AIDAQ96BJ3 306 aa13.99□□□□□ -0.17
IGHV3-25-201ENST00000518224 ZNF512BQ96KM6 892 aaPredicted RBP13.99□□□□□ -0.17
IGHV3-25-201ENST00000518224 DAGLAQ9Y4D2 1042 aa13.99□□□□□ -0.17
IGHV3-25-201ENST00000518224 SURF6O75683 361 aaKnown RBP13.98□□□□□ -0.17
IGHV3-25-201ENST00000518224 LDHBP07195 334 aaKnown RBP13.98□□□□□ -0.17
IGHV3-25-201ENST00000518224 TNNI3KQ59H18 835 aa13.98□□□□□ -0.17
IGHV3-25-201ENST00000518224 NBPF12Q5TAG4 269 aaPredicted RBP13.98□□□□□ -0.17
IGHV3-25-201ENST00000518224 ARMC9Q7Z3E5 817 aa13.98□□□□□ -0.17
IGHV3-25-201ENST00000518224 SIRT2Q8IXJ6 389 aa13.98□□□□□ -0.17
IGHV3-25-201ENST00000518224 RPAP2Q8IXW5 612 aaPredicted RBP13.98□□□□□ -0.17
IGHV3-25-201ENST00000518224 VEZTQ9HBM0 779 aa13.98□□□□□ -0.17
IGHV3-25-201ENST00000518224 HMG20BQ9P0W2 317 aa13.98□□□□□ -0.17
IGHV3-25-201ENST00000518224 FPGT-TNNI3KV9GXZ4 949 aa13.98□□□□□ -0.17
IGHV3-25-201ENST00000518224 AKAP11Q9UKA4 1901 aa13.98□□□□□ -0.17
IGHV3-25-201ENST00000518224 RFX7Q2KHR2 1363 aa13.97□□□□□ -0.17
IGHV3-25-201ENST00000518224 IGSF3O75054 1194 aa13.97□□□□□ -0.17
IGHV3-25-201ENST00000518224 USP2O75604 605 aaPredicted RBP13.97□□□□□ -0.17
IGHV3-25-201ENST00000518224 KIF23Q02241 960 aaPredicted RBP13.97□□□□□ -0.17
IGHV3-25-201ENST00000518224 ZNF384Q8TF68 577 aa13.97□□□□□ -0.17
IGHV3-25-201ENST00000518224 CSRNP1Q96S65 589 aa13.97□□□□□ -0.17
IGHV3-25-201ENST00000518224 SAGE1Q9NXZ1 904 aa13.97□□□□□ -0.17
IGHV3-25-201ENST00000518224 COG6Q9Y2V7 657 aa13.97□□□□□ -0.17
IGHV3-25-201ENST00000518224 PPP1R12BO60237 982 aaPredicted RBP13.96□□□□□ -0.17
IGHV3-25-201ENST00000518224 UQCRFS1P1P0C7P4 283 aa13.96□□□□□ -0.17
IGHV3-25-201ENST00000518224 TNNI2P48788 182 aa13.96□□□□□ -0.17
IGHV3-25-201ENST00000518224 GRM1Q13255 1194 aa13.96□□□□□ -0.17
IGHV3-25-201ENST00000518224 DIXDC1Q155Q3 683 aa13.96□□□□□ -0.17
IGHV3-25-201ENST00000518224 CDC42EP5Q6NZY7 148 aa13.96□□□□□ -0.17
IGHV3-25-201ENST00000518224 CDAN1Q8IWY9 1227 aa13.96□□□□□ -0.17
IGHV3-25-201ENST00000518224 SPATA5Q8NB90 893 aa13.96□□□□□ -0.17
IGHV3-25-201ENST00000518224 NEUROD6Q96NK8 337 aa13.96□□□□□ -0.17
IGHV3-25-201ENST00000518224 CHMP4BQ9H444 224 aaKnown RBP13.96□□□□□ -0.17
IGHV3-25-201ENST00000518224 TCP10L2B9ZVM9 353 aa13.95□□□□□ -0.18
IGHV3-25-201ENST00000518224 MCAMP43121 646 aa13.95□□□□□ -0.18
IGHV3-25-201ENST00000518224 TM4SF4P48230 202 aa13.95□□□□□ -0.18
IGHV3-25-201ENST00000518224 LBX1P52954 281 aa13.95□□□□□ -0.18
IGHV3-25-201ENST00000518224 C20orf194Q5TEA3 1177 aa13.95□□□□□ -0.18
IGHV3-25-201ENST00000518224 IFFO2Q5TF58 517 aa13.95□□□□□ -0.18
IGHV3-25-201ENST00000518224 SPTY2D1Q68D10 685 aaPredicted RBP13.95□□□□□ -0.18
IGHV3-25-201ENST00000518224 DBNDD2Q9BQY9 259 aa13.95□□□□□ -0.18
IGHV3-25-201ENST00000518224 BEGAINQ9BUH8 593 aa13.95□□□□□ -0.18
IGHV3-25-201ENST00000518224 TMEM39BQ9GZU3 492 aa13.95□□□□□ -0.18
IGHV3-25-201ENST00000518224 DBNLQ9UJU6 430 aaKnown RBP13.95□□□□□ -0.18
IGHV3-25-201ENST00000518224 ANGEL1Q9UNK9 670 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms