RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ZNF70Q9UC06 446 aaPredicted RBP14.24□□□□□ -0.13
VCAN-212ENST00000515397 SURF6O75683 361 aaKnown RBP14.23□□□□□ -0.13
VCAN-212ENST00000515397 MMP14P50281 582 aa14.23□□□□□ -0.13
VCAN-212ENST00000515397 MKRN3Q13064 507 aaKnown RBP14.23□□□□□ -0.13
VCAN-212ENST00000515397 OS9Q13438 667 aaPredicted RBP14.23□□□□□ -0.13
VCAN-212ENST00000515397 RASA3Q14644 834 aa14.23□□□□□ -0.13
VCAN-212ENST00000515397 NBPF12Q5TAG4 269 aaPredicted RBP14.23□□□□□ -0.13
VCAN-212ENST00000515397 APOBEC3FQ8IUX4 373 aaKnown RBP14.23□□□□□ -0.13
VCAN-212ENST00000515397 CDAN1Q8IWY9 1227 aa14.23□□□□□ -0.13
VCAN-212ENST00000515397 TBC1D22AQ8WUA7 517 aa14.23□□□□□ -0.13
VCAN-212ENST00000515397 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
VCAN-212ENST00000515397 SERPINA10Q9UK55 444 aa14.23□□□□□ -0.13
VCAN-212ENST00000515397 COL1A1P02452 1464 aaPredicted RBP14.23□□□□□ -0.13
VCAN-212ENST00000515397 FAM155AB1AL88 458 aaPredicted RBP14.22□□□□□ -0.13
VCAN-212ENST00000515397 MYO1BO43795 1136 aa14.22□□□□□ -0.13
VCAN-212ENST00000515397 PRDX5P30044 214 aa14.22□□□□□ -0.13
VCAN-212ENST00000515397 LBX1P52954 281 aa14.22□□□□□ -0.13
VCAN-212ENST00000515397 KIF23Q02241 960 aaPredicted RBP14.22□□□□□ -0.13
VCAN-212ENST00000515397 MAP2K1Q02750 393 aaPredicted RBP14.22□□□□□ -0.13
VCAN-212ENST00000515397 DIXDC1Q155Q3 683 aa14.22□□□□□ -0.13
VCAN-212ENST00000515397 SSH3Q8TE77 659 aa14.22□□□□□ -0.13
VCAN-212ENST00000515397 HHIPL1Q96JK4 782 aa14.22□□□□□ -0.13
VCAN-212ENST00000515397 GNL3LQ9NVN8 582 aaKnown RBP14.22□□□□□ -0.13
VCAN-212ENST00000515397 MAP2K2P36507 400 aa14.21□□□□□ -0.13
VCAN-212ENST00000515397 RASGRF1Q13972 1273 aa14.21□□□□□ -0.13
VCAN-212ENST00000515397 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
VCAN-212ENST00000515397 GORABQ5T7V8 394 aa14.21□□□□□ -0.13
VCAN-212ENST00000515397 APOBEC3HQ6NTF7 200 aaKnown RBP14.21□□□□□ -0.13
VCAN-212ENST00000515397 CEP85Q6P2H3 762 aa14.21□□□□□ -0.13
VCAN-212ENST00000515397 PI16Q6UXB8 463 aa14.21□□□□□ -0.13
VCAN-212ENST00000515397 WDR66Q8TBY9 1149 aa14.21□□□□□ -0.13
VCAN-212ENST00000515397 TEKT1Q969V4 418 aa14.21□□□□□ -0.13
VCAN-212ENST00000515397 TMEM39BQ9GZU3 492 aa14.21□□□□□ -0.13
VCAN-212ENST00000515397 ANGEL1Q9UNK9 670 aaKnown RBP14.21□□□□□ -0.13
VCAN-212ENST00000515397 AKAP2Q9Y2D5 859 aa14.21□□□□□ -0.13
VCAN-212ENST00000515397 NF2P35240 595 aa14.2□□□□□ -0.14
VCAN-212ENST00000515397 MVPQ14764 893 aaKnown RBP14.2□□□□□ -0.14
VCAN-212ENST00000515397 TBC1D9Q6ZT07 1266 aa14.2□□□□□ -0.14
VCAN-212ENST00000515397 ABCF2Q9UG63 623 aa14.2□□□□□ -0.14
VCAN-212ENST00000515397 DENND2AQ9ULE3 1009 aa14.2□□□□□ -0.14
VCAN-212ENST00000515397 APBB1O00213 710 aa14.19□□□□□ -0.14
VCAN-212ENST00000515397 LDHBP07195 334 aaKnown RBP14.19□□□□□ -0.14
VCAN-212ENST00000515397 HSPA8P11142 646 aaKnown RBP14.19□□□□□ -0.14
VCAN-212ENST00000515397 CTCFP49711 727 aaPredicted RBP14.19□□□□□ -0.14
VCAN-212ENST00000515397 NOGQ13253 232 aa14.19□□□□□ -0.14
VCAN-212ENST00000515397 RASAL3Q86YV0 1011 aa14.19□□□□□ -0.14
VCAN-212ENST00000515397 CCDC102AQ96A19 550 aa14.19□□□□□ -0.14
VCAN-212ENST00000515397 DBNDD2Q9BQY9 259 aa14.19□□□□□ -0.14
VCAN-212ENST00000515397 BEGAINQ9BUH8 593 aa14.19□□□□□ -0.14
VCAN-212ENST00000515397 CCDC8Q9H0W5 538 aaPredicted RBP14.19□□□□□ -0.14
VCAN-212ENST00000515397 SNRKQ9NRH2 765 aa14.19□□□□□ -0.14
VCAN-212ENST00000515397 EXOC6BQ9Y2D4 811 aa14.19□□□□□ -0.14
VCAN-212ENST00000515397 SLC10A3P09131 477 aa14.18□□□□□ -0.14
VCAN-212ENST00000515397 FKBP1BP68106 108 aa14.18□□□□□ -0.14
VCAN-212ENST00000515397 HDLBPQ00341 1268 aaKnown RBP14.18□□□□□ -0.14
VCAN-212ENST00000515397 TNNI3KQ59H18 835 aa14.18□□□□□ -0.14
VCAN-212ENST00000515397 ARMC9Q7Z3E5 817 aa14.18□□□□□ -0.14
VCAN-212ENST00000515397 TNS4Q8IZW8 715 aa14.18□□□□□ -0.14
VCAN-212ENST00000515397 CLMNQ96JQ2 1002 aa14.18□□□□□ -0.14
VCAN-212ENST00000515397 ZDHHC15Q96MV8 337 aa14.18□□□□□ -0.14
VCAN-212ENST00000515397 CSRNP1Q96S65 589 aa14.18□□□□□ -0.14
VCAN-212ENST00000515397 HMG20BQ9P0W2 317 aa14.18□□□□□ -0.14
VCAN-212ENST00000515397 DAGLAQ9Y4D2 1042 aa14.18□□□□□ -0.14
VCAN-212ENST00000515397 FPGT-TNNI3KV9GXZ4 949 aa14.18□□□□□ -0.14
VCAN-212ENST00000515397 USP2O75604 605 aaPredicted RBP14.17□□□□□ -0.14
VCAN-212ENST00000515397 MS4A1P11836 297 aa14.17□□□□□ -0.14
VCAN-212ENST00000515397 HHIPL2Q6UWX4 724 aa14.17□□□□□ -0.14
VCAN-212ENST00000515397 SIRT2Q8IXJ6 389 aa14.17□□□□□ -0.14
VCAN-212ENST00000515397 TEPSINQ96N21 525 aa14.17□□□□□ -0.14
VCAN-212ENST00000515397 ZBTB40Q9NUA8 1239 aa14.17□□□□□ -0.14
VCAN-212ENST00000515397 TLR7Q9NYK1 1049 aaKnown RBP14.17□□□□□ -0.14
VCAN-212ENST00000515397 NOP58Q9Y2X3 529 aaKnown RBP14.17□□□□□ -0.14
VCAN-212ENST00000515397 SUGT1Q9Y2Z0 365 aa14.17□□□□□ -0.14
VCAN-212ENST00000515397 SEMA3EO15041 775 aa14.16□□□□□ -0.14
VCAN-212ENST00000515397 TRPA1O75762 1119 aa14.16□□□□□ -0.14
VCAN-212ENST00000515397 MCAMP43121 646 aa14.16□□□□□ -0.14
VCAN-212ENST00000515397 TCP10Q12799 353 aa14.16□□□□□ -0.14
VCAN-212ENST00000515397 SUPT20HL1Q3ZLR7 823 aa14.16□□□□□ -0.14
VCAN-212ENST00000515397 LDLRAD1Q5T700 205 aa14.16□□□□□ -0.14
VCAN-212ENST00000515397 CDC42EP5Q6NZY7 148 aa14.16□□□□□ -0.14
VCAN-212ENST00000515397 EAF2Q96CJ1 260 aaPredicted RBP14.16□□□□□ -0.14
VCAN-212ENST00000515397 SLC10A4Q96EP9 437 aa14.16□□□□□ -0.14
VCAN-212ENST00000515397 MRIQ9BWK5 157 aa14.16□□□□□ -0.14
VCAN-212ENST00000515397 USP40Q9NVE5 1235 aa14.16□□□□□ -0.14
VCAN-212ENST00000515397 SSC5DA1L4H1 1573 aa14.16□□□□□ -0.14
VCAN-212ENST00000515397 PPP1R12BO60237 982 aaPredicted RBP14.15□□□□□ -0.14
VCAN-212ENST00000515397 NFIAQ12857 509 aa14.15□□□□□ -0.14
VCAN-212ENST00000515397 TNFAIP1Q13829 316 aa14.15□□□□□ -0.14
VCAN-212ENST00000515397 TTC39AQ5SRH9 613 aa14.15□□□□□ -0.14
VCAN-212ENST00000515397 ZFPM1Q8IX07 1006 aa14.15□□□□□ -0.14
VCAN-212ENST00000515397 SPATA5Q8NB90 893 aa14.15□□□□□ -0.14
VCAN-212ENST00000515397 ZNF384Q8TF68 577 aa14.15□□□□□ -0.14
VCAN-212ENST00000515397 IL1RAPL2Q9NP60 686 aa14.15□□□□□ -0.14
VCAN-212ENST00000515397 DDX19BQ9UMR2 479 aa14.15□□□□□ -0.14
VCAN-212ENST00000515397 PPP2R3BQ9Y5P8 575 aa14.15□□□□□ -0.14
VCAN-212ENST00000515397 MAST3O60307 1309 aa14.15□□□□□ -0.15
VCAN-212ENST00000515397 MECOMQ03112 1051 aa14.14□□□□□ -0.15
VCAN-212ENST00000515397 MIGA2Q7L4E1 593 aa14.14□□□□□ -0.15
VCAN-212ENST00000515397 DZIP1Q86YF9 867 aaKnown RBP14.14□□□□□ -0.15
VCAN-212ENST00000515397 RNF186Q9NXI6 227 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms