RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 CTCFP49711 727 aaPredicted RBP17.24■□□□□ 0.35
ITGA3-214ENST00000514834 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
ITGA3-214ENST00000514834 FTSJ3Q8IY81 847 aaKnown RBP17.24■□□□□ 0.35
ITGA3-214ENST00000514834 TNS4Q8IZW8 715 aa17.24■□□□□ 0.35
ITGA3-214ENST00000514834 ZNF70Q9UC06 446 aaPredicted RBP17.24■□□□□ 0.35
ITGA3-214ENST00000514834 KIF23Q02241 960 aaPredicted RBP17.23■□□□□ 0.35
ITGA3-214ENST00000514834 NOGQ13253 232 aa17.23■□□□□ 0.35
ITGA3-214ENST00000514834 CDAN1Q8IWY9 1227 aa17.23■□□□□ 0.35
ITGA3-214ENST00000514834 TBC1D22AQ8WUA7 517 aa17.23■□□□□ 0.35
ITGA3-214ENST00000514834 SLC10A3P09131 477 aa17.22■□□□□ 0.35
ITGA3-214ENST00000514834 FKBP1BP68106 108 aa17.22■□□□□ 0.35
ITGA3-214ENST00000514834 TTLL12Q14166 644 aaPredicted RBP17.22■□□□□ 0.35
ITGA3-214ENST00000514834 POLA2Q14181 598 aa17.22■□□□□ 0.35
ITGA3-214ENST00000514834 RASA3Q14644 834 aa17.22■□□□□ 0.35
ITGA3-214ENST00000514834 SPDYE2Q495Y8 402 aa17.22■□□□□ 0.35
ITGA3-214ENST00000514834 NBPF12Q5TAG4 269 aaPredicted RBP17.22■□□□□ 0.35
ITGA3-214ENST00000514834 RASAL3Q86YV0 1011 aa17.22■□□□□ 0.35
ITGA3-214ENST00000514834 A0A1B0GUL7 405 aa17.21■□□□□ 0.35
ITGA3-214ENST00000514834 MYO1BO43795 1136 aa17.21■□□□□ 0.35
ITGA3-214ENST00000514834 CACNB3P54284 484 aa17.21■□□□□ 0.35
ITGA3-214ENST00000514834 ATP8B2P98198 1209 aa17.21■□□□□ 0.35
ITGA3-214ENST00000514834 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
ITGA3-214ENST00000514834 CCDC102AQ96A19 550 aa17.21■□□□□ 0.35
ITGA3-214ENST00000514834 TCP10L2B9ZVM9 353 aa17.2■□□□□ 0.34
ITGA3-214ENST00000514834 PRDX5P30044 214 aa17.2■□□□□ 0.34
ITGA3-214ENST00000514834 HDLBPQ00341 1268 aaKnown RBP17.2■□□□□ 0.34
ITGA3-214ENST00000514834 APOBEC3HQ6NTF7 200 aaKnown RBP17.2■□□□□ 0.34
ITGA3-214ENST00000514834 WDR66Q8TBY9 1149 aa17.2■□□□□ 0.34
ITGA3-214ENST00000514834 SSH3Q8TE77 659 aa17.2■□□□□ 0.34
ITGA3-214ENST00000514834 XAGE2Q96GT9 111 aa17.2■□□□□ 0.34
ITGA3-214ENST00000514834 CSRNP1Q96S65 589 aa17.2■□□□□ 0.34
ITGA3-214ENST00000514834 PRDM10Q9NQV6 1147 aa17.2■□□□□ 0.34
ITGA3-214ENST00000514834 NF2P35240 595 aa17.19■□□□□ 0.34
ITGA3-214ENST00000514834 RASGRF1Q13972 1273 aa17.19■□□□□ 0.34
ITGA3-214ENST00000514834 DIXDC1Q155Q3 683 aa17.19■□□□□ 0.34
ITGA3-214ENST00000514834 LDLRAD1Q5T700 205 aa17.19■□□□□ 0.34
ITGA3-214ENST00000514834 TEKT1Q969V4 418 aa17.19■□□□□ 0.34
ITGA3-214ENST00000514834 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
ITGA3-214ENST00000514834 ZDHHC15Q96MV8 337 aa17.19■□□□□ 0.34
ITGA3-214ENST00000514834 TEPSINQ96N21 525 aa17.19■□□□□ 0.34
ITGA3-214ENST00000514834 TMEM39BQ9GZU3 492 aa17.19■□□□□ 0.34
ITGA3-214ENST00000514834 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.19■□□□□ 0.34
ITGA3-214ENST00000514834 RCAN3Q9UKA8 241 aa17.19■□□□□ 0.34
ITGA3-214ENST00000514834 ANGEL1Q9UNK9 670 aaKnown RBP17.19■□□□□ 0.34
ITGA3-214ENST00000514834 MKRN3Q13064 507 aaKnown RBP17.18■□□□□ 0.34
ITGA3-214ENST00000514834 G3BP1Q13283 466 aaKnown RBP eCLIP17.18■□□□□ 0.34
ITGA3-214ENST00000514834 CLMNQ96JQ2 1002 aa17.18■□□□□ 0.34
ITGA3-214ENST00000514834 NEUROD6Q96NK8 337 aa17.18■□□□□ 0.34
ITGA3-214ENST00000514834 BEGAINQ9BUH8 593 aa17.18■□□□□ 0.34
ITGA3-214ENST00000514834 GNL3LQ9NVN8 582 aaKnown RBP17.18■□□□□ 0.34
ITGA3-214ENST00000514834 USP2O75604 605 aaPredicted RBP17.17■□□□□ 0.34
ITGA3-214ENST00000514834 PI16Q6UXB8 463 aa17.17■□□□□ 0.34
ITGA3-214ENST00000514834 ARMC9Q7Z3E5 817 aa17.17■□□□□ 0.34
ITGA3-214ENST00000514834 MRIQ9BWK5 157 aa17.17■□□□□ 0.34
ITGA3-214ENST00000514834 DENND2AQ9ULE3 1009 aa17.17■□□□□ 0.34
ITGA3-214ENST00000514834 AKAP2Q9Y2D5 859 aa17.17■□□□□ 0.34
ITGA3-214ENST00000514834 SUGT1Q9Y2Z0 365 aa17.17■□□□□ 0.34
ITGA3-214ENST00000514834 PPP2R3BQ9Y5P8 575 aa17.17■□□□□ 0.34
ITGA3-214ENST00000514834 CASP8AP2Q9UKL3 1982 aa17.17■□□□□ 0.34
ITGA3-214ENST00000514834 HHIPL2Q6UWX4 724 aa17.16■□□□□ 0.34
ITGA3-214ENST00000514834 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
ITGA3-214ENST00000514834 SEMA3EO15041 775 aa17.15■□□□□ 0.34
ITGA3-214ENST00000514834 SURF6O75683 361 aaKnown RBP17.15■□□□□ 0.34
ITGA3-214ENST00000514834 LDHBP07195 334 aaKnown RBP17.15■□□□□ 0.34
ITGA3-214ENST00000514834 MAP3K11Q16584 847 aa17.15■□□□□ 0.34
ITGA3-214ENST00000514834 SUPT20HL1Q3ZLR7 823 aa17.15■□□□□ 0.34
ITGA3-214ENST00000514834 C20orf194Q5TEA3 1177 aa17.15■□□□□ 0.34
ITGA3-214ENST00000514834 CEP85Q6P2H3 762 aa17.15■□□□□ 0.34
ITGA3-214ENST00000514834 RNF186Q9NXI6 227 aa17.15■□□□□ 0.34
ITGA3-214ENST00000514834 COG6Q9Y2V7 657 aa17.15■□□□□ 0.34
ITGA3-214ENST00000514834 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
ITGA3-214ENST00000514834 SALL1Q9NSC2 1324 aa17.15■□□□□ 0.34
ITGA3-214ENST00000514834 MYH2Q9UKX2 1941 aa17.14■□□□□ 0.33
ITGA3-214ENST00000514834 TRPA1O75762 1119 aa17.14■□□□□ 0.33
ITGA3-214ENST00000514834 MVPQ14764 893 aaKnown RBP17.14■□□□□ 0.33
ITGA3-214ENST00000514834 HMG20BQ9P0W2 317 aa17.14■□□□□ 0.33
ITGA3-214ENST00000514834 NOP58Q9Y2X3 529 aaKnown RBP17.14■□□□□ 0.33
ITGA3-214ENST00000514834 OTOFQ9HC10 1997 aa17.14■□□□□ 0.33
ITGA3-214ENST00000514834 MAST3O60307 1309 aa17.14■□□□□ 0.33
ITGA3-214ENST00000514834 ZBTB22O15209 634 aa17.13■□□□□ 0.33
ITGA3-214ENST00000514834 PPP1R12BO60237 982 aaPredicted RBP17.13■□□□□ 0.33
ITGA3-214ENST00000514834 MS4A1P11836 297 aa17.13■□□□□ 0.33
ITGA3-214ENST00000514834 TNFAIP1Q13829 316 aa17.13■□□□□ 0.33
ITGA3-214ENST00000514834 CDC42EP5Q6NZY7 148 aa17.13■□□□□ 0.33
ITGA3-214ENST00000514834 TBC1D9Q6ZT07 1266 aa17.13■□□□□ 0.33
ITGA3-214ENST00000514834 ZNF384Q8TF68 577 aa17.13■□□□□ 0.33
ITGA3-214ENST00000514834 ABCF2Q9UG63 623 aa17.13■□□□□ 0.33
ITGA3-214ENST00000514834 CA12O43570 354 aa17.12■□□□□ 0.33
ITGA3-214ENST00000514834 GJA5P36382 358 aa17.12■□□□□ 0.33
ITGA3-214ENST00000514834 NFIAQ12857 509 aa17.12■□□□□ 0.33
ITGA3-214ENST00000514834 OS9Q13438 667 aaPredicted RBP17.12■□□□□ 0.33
ITGA3-214ENST00000514834 TNNI3KQ59H18 835 aa17.12■□□□□ 0.33
ITGA3-214ENST00000514834 GORABQ5T7V8 394 aa17.12■□□□□ 0.33
ITGA3-214ENST00000514834 SPRYD7Q5W111 196 aa17.12■□□□□ 0.33
ITGA3-214ENST00000514834 SLC10A4Q96EP9 437 aa17.12■□□□□ 0.33
ITGA3-214ENST00000514834 DBNDD2Q9BQY9 259 aa17.12■□□□□ 0.33
ITGA3-214ENST00000514834 FPGT-TNNI3KV9GXZ4 949 aa17.12■□□□□ 0.33
ITGA3-214ENST00000514834 ARID4AP29374 1257 aaPredicted RBP17.11■□□□□ 0.33
ITGA3-214ENST00000514834 MCAMP43121 646 aa17.11■□□□□ 0.33
ITGA3-214ENST00000514834 TNNI2P48788 182 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms