RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 LRRC14Q15048 493 aa7.22□□□□□ -1.25
CALCOCO2-222ENST00000514006 CEP135Q66GS9 1140 aa7.22□□□□□ -1.25
CALCOCO2-222ENST00000514006 GTPBP3Q969Y2 492 aaKnown RBP7.22□□□□□ -1.25
CALCOCO2-222ENST00000514006 POP1Q99575 1024 aaKnown RBP7.22□□□□□ -1.25
CALCOCO2-222ENST00000514006 ATP13A2Q9NQ11 1180 aa7.22□□□□□ -1.25
CALCOCO2-222ENST00000514006 DNAJB12Q9NXW2 375 aaKnown RBP7.22□□□□□ -1.25
CALCOCO2-222ENST00000514006 CYP8B1Q9UNU6 501 aa7.22□□□□□ -1.25
CALCOCO2-222ENST00000514006 FAM221AA4D161 298 aa7.21□□□□□ -1.26
CALCOCO2-222ENST00000514006 BPNT1O95861 308 aa7.21□□□□□ -1.26
CALCOCO2-222ENST00000514006 BMP6P22004 513 aa7.21□□□□□ -1.26
CALCOCO2-222ENST00000514006 SEPT6Q14141 434 aa7.21□□□□□ -1.26
CALCOCO2-222ENST00000514006 MICALL1Q8N3F8 863 aa7.21□□□□□ -1.26
CALCOCO2-222ENST00000514006 OR6P1Q8NGX9 317 aa7.21□□□□□ -1.26
CALCOCO2-222ENST00000514006 RNPC3Q96LT9 517 aaKnown RBP7.21□□□□□ -1.26
CALCOCO2-222ENST00000514006 FAM221BA6H8Z2 402 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 CILPO75339 1184 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 B3GALT4O96024 378 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 ITGA6P23229 1130 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 GIPRP48546 466 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 RNF187Q5TA31 235 aaPredicted RBP7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 RASIP1Q5U651 963 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 LLGL2Q6P1M3 1020 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 REC114Q7Z4M0 266 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 SYT9Q86SS6 491 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 SULF2Q8IWU5 870 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 REXO1Q8N1G1 1221 aaKnown RBP7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 FAM169BQ8N8A8 192 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 EMILIN2Q9BXX0 1053 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 CBX8Q9HC52 389 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 ACTR10Q9NZ32 417 aa7.2□□□□□ -1.26
CALCOCO2-222ENST00000514006 FAM177BA6PVY3 158 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 IMPDH2P12268 514 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 PTPRAP18433 802 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 IBSPP21815 317 aaPredicted RBP7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 CHMP4BP1P59074 171 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 CTBSQ01459 385 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 PTPROQ16827 1216 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 FOXR1Q6PIV2 292 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 GK5Q6ZS86 529 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 PLD4Q96BZ4 506 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 TRERF1Q96PN7 1200 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 CCDC113Q9H0I3 377 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 BRMS1Q9HCU9 246 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 ZNRF3Q9ULT6 936 aa7.19□□□□□ -1.26
CALCOCO2-222ENST00000514006 CPB1P15086 417 aa7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 ARNTP27540 789 aa7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 IFRD2Q12894 506 aaPredicted RBP7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 DDR2Q16832 855 aa7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 ZNF423Q2M1K9 1284 aa7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 ZNF468Q5VIY5 522 aaPredicted RBP7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 FAM35AQ86V20 835 aa7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 CELF2-AS1Q8N7Q2 184 aa7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 DDX54Q8TDD1 881 aaKnown RBP7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 GPATCH3Q96I76 525 aa7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 ST7Q9NRC1 585 aa7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 SOX13Q9UN79 622 aa7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 MSRB2Q9Y3D2 182 aa7.18□□□□□ -1.26
CALCOCO2-222ENST00000514006 hCG_2014768A0A024R1R8 64 aa7.17□□□□□ -1.26
CALCOCO2-222ENST00000514006 SIN3BO75182 1162 aa7.17□□□□□ -1.26
CALCOCO2-222ENST00000514006 CLCQ05315 142 aa7.17□□□□□ -1.26
CALCOCO2-222ENST00000514006 VN1R5Q7Z5H4 357 aa7.17□□□□□ -1.26
CALCOCO2-222ENST00000514006 GRIN3AQ8TCU5 1115 aa7.17□□□□□ -1.26
CALCOCO2-222ENST00000514006 STK35Q8TDR2 534 aa7.17□□□□□ -1.26
CALCOCO2-222ENST00000514006 SH3TC2Q8TF17 1288 aa7.17□□□□□ -1.26
CALCOCO2-222ENST00000514006 KCNB2Q92953 911 aa7.17□□□□□ -1.26
CALCOCO2-222ENST00000514006 NRG2O14511 850 aaPredicted RBP7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 ST8SIA5O15466 376 aa7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 TRIM37O94972 964 aa7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 IGBP1P78318 339 aa7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 RPL6Q02878 288 aaKnown RBP7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 FXNQ16595 210 aa7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 ELMSAN1Q6PJG2 1045 aa7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 LSRQ86X29 649 aaPredicted RBP7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 RBBP8NLQ8NC74 664 aaPredicted RBP7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 ZCRB1Q8TBF4 217 aaKnown RBP7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 GAL3ST3Q96A11 431 aa7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 DNAJC7Q99615 494 aa7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 LACRTQ9GZZ8 138 aa7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 ADAM19Q9H013 955 aa7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 SMG9Q9H0W8 520 aaKnown RBP7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 AAASQ9NRG9 546 aa7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 SLC6A14Q9UN76 642 aa7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 MAPK8IP1Q9UQF2 711 aa7.16□□□□□ -1.26
CALCOCO2-222ENST00000514006 GPR25O00155 361 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 PDPK1O15530 556 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 GFRA3O60609 400 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 CDC45O75419 566 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 ESRRAP11474 423 aaPredicted RBP7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 BMP4P12644 408 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 CABP4P57796 275 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 RASGRF1Q13972 1273 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 PLEKHG4Q58EX7 1191 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 LARP1BQ659C4 914 aaKnown RBP7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 SCARA3Q6AZY7 606 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 TNFRSF25Q93038 417 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 KIFC2Q96AC6 838 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 SLKQ9H2G2 1235 aaPredicted RBP7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 SENP2Q9HC62 589 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 FANCLQ9NW38 375 aa7.15□□□□□ -1.26
CALCOCO2-222ENST00000514006 PCDHB14Q9Y5E9 798 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms