RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 SPDYE5A6NIY4 337 aa13.45□□□□□ -0.26
CLDND1-227ENST00000513452 BTBD19C9JJ37 291 aa13.45□□□□□ -0.26
CLDND1-227ENST00000513452 CCL5P13501 91 aa13.45□□□□□ -0.26
CLDND1-227ENST00000513452 GNAI1P63096 354 aa13.45□□□□□ -0.26
CLDND1-227ENST00000513452 RALBP1Q15311 655 aa13.45□□□□□ -0.26
CLDND1-227ENST00000513452 C15orf52Q6ZUT6 534 aaKnown RBP13.45□□□□□ -0.26
CLDND1-227ENST00000513452 UBE2Q1Q7Z7E8 422 aa13.45□□□□□ -0.26
CLDND1-227ENST00000513452 LRCH3Q96II8 777 aa13.45□□□□□ -0.26
CLDND1-227ENST00000513452 PLA2G12BQ9BX93 195 aa13.45□□□□□ -0.26
CLDND1-227ENST00000513452 NR2E3Q9Y5X4 410 aa13.45□□□□□ -0.26
CLDND1-227ENST00000513452 ANKRD18BA2A2Z9 1011 aa13.44□□□□□ -0.26
CLDND1-227ENST00000513452 ZBTB7BO15156 539 aaPredicted RBP13.44□□□□□ -0.26
CLDND1-227ENST00000513452 CTGFP29279 349 aa13.44□□□□□ -0.26
CLDND1-227ENST00000513452 GRK4P32298 578 aa13.44□□□□□ -0.26
CLDND1-227ENST00000513452 GJA8P48165 433 aa13.44□□□□□ -0.26
CLDND1-227ENST00000513452 RAET1EQ8TD07 263 aa13.44□□□□□ -0.26
CLDND1-227ENST00000513452 TRIM47Q96LD4 638 aa13.44□□□□□ -0.26
CLDND1-227ENST00000513452 ZCCHC17Q9NP64 241 aaKnown RBP13.44□□□□□ -0.26
CLDND1-227ENST00000513452 SRRDQ9UH36 339 aa13.44□□□□□ -0.26
CLDND1-227ENST00000513452 TTF2Q9UNY4 1162 aaKnown RBP13.44□□□□□ -0.26
CLDND1-227ENST00000513452 SNCAIPQ9Y6H5 919 aa13.44□□□□□ -0.26
CLDND1-227ENST00000513452 FARP2O94887 1054 aaPredicted RBP13.43□□□□□ -0.26
CLDND1-227ENST00000513452 CSF1RP07333 972 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 GJB1P08034 283 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 PSMC4P43686 418 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 SNAPC2Q13487 334 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 GCKRQ14397 625 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 MFSD14BQ5SR56 506 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 ERO1BQ86YB8 467 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 DZIP1LQ8IYY4 767 aaKnown RBP13.43□□□□□ -0.26
CLDND1-227ENST00000513452 WRNIP1Q96S55 665 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 RNF208Q9H0X6 261 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 BIN2Q9UBW5 565 aaPredicted RBP13.43□□□□□ -0.26
CLDND1-227ENST00000513452 CPA4Q9UI42 421 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 SERPINA10Q9UK55 444 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 ADAMTS8Q9UP79 889 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 RIPOR2Q9Y4F9 1068 aa13.43□□□□□ -0.26
CLDND1-227ENST00000513452 COL6A3P12111 3177 aa13.42□□□□□ -0.26
CLDND1-227ENST00000513452 MYPNQ86TC9 1320 aa13.42□□□□□ -0.26
CLDND1-227ENST00000513452 A0A1W2PPC1 479 aa13.42□□□□□ -0.26
CLDND1-227ENST00000513452 IRF6O14896 467 aa13.42□□□□□ -0.26
CLDND1-227ENST00000513452 OSBPP22059 807 aa13.42□□□□□ -0.26
CLDND1-227ENST00000513452 TNNI2P48788 182 aa13.42□□□□□ -0.26
CLDND1-227ENST00000513452 MNX1P50219 401 aaPredicted RBP13.42□□□□□ -0.26
CLDND1-227ENST00000513452 CASP7P55210 303 aa13.42□□□□□ -0.26
CLDND1-227ENST00000513452 CALD1Q05682 793 aaKnown RBP13.42□□□□□ -0.26
CLDND1-227ENST00000513452 TSPYL6Q8N831 410 aa13.42□□□□□ -0.26
CLDND1-227ENST00000513452 STK31Q9BXU1 1019 aa13.42□□□□□ -0.26
CLDND1-227ENST00000513452 CHMP4AQ9BY43 222 aa13.42□□□□□ -0.26
CLDND1-227ENST00000513452 LAMA3Q16787 3333 aa13.42□□□□□ -0.26
CLDND1-227ENST00000513452 MYBBP1AQ9BQG0 1328 aaKnown RBP13.41□□□□□ -0.26
CLDND1-227ENST00000513452 PLIN1O60240 522 aa13.41□□□□□ -0.26
CLDND1-227ENST00000513452 FMNL1O95466 1100 aaPredicted RBP13.41□□□□□ -0.26
CLDND1-227ENST00000513452 HOXD10P28358 340 aa13.41□□□□□ -0.26
CLDND1-227ENST00000513452 PPIL2Q13356 520 aa13.41□□□□□ -0.26
CLDND1-227ENST00000513452 C17orf99Q6UX52 265 aa13.41□□□□□ -0.26
CLDND1-227ENST00000513452 U2AF1L4Q8WU68 220 aaKnown RBP13.41□□□□□ -0.26
CLDND1-227ENST00000513452 ZKSCAN4Q969J2 545 aaPredicted RBP13.41□□□□□ -0.26
CLDND1-227ENST00000513452 CHMP3Q9Y3E7 222 aa13.41□□□□□ -0.26
CLDND1-227ENST00000513452 FAM205AQ6ZU69 1335 aa13.4□□□□□ -0.26
CLDND1-227ENST00000513452 EVI5O60447 810 aa13.4□□□□□ -0.26
CLDND1-227ENST00000513452 CRKP46108 304 aa13.4□□□□□ -0.26
CLDND1-227ENST00000513452 CACNB3P54284 484 aa13.4□□□□□ -0.26
CLDND1-227ENST00000513452 UBXN2AP68543 259 aa13.4□□□□□ -0.26
CLDND1-227ENST00000513452 IFIT5Q13325 482 aaKnown RBP13.4□□□□□ -0.26
CLDND1-227ENST00000513452 G2E3Q7L622 706 aa13.4□□□□□ -0.26
CLDND1-227ENST00000513452 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.4□□□□□ -0.26
CLDND1-227ENST00000513452 MYH16Q9H6N6 1097 aa13.4□□□□□ -0.26
CLDND1-227ENST00000513452 A0A0C4DFX4 3053 aa13.4□□□□□ -0.26
CLDND1-227ENST00000513452 PRKCZQ05513 592 aa13.39□□□□□ -0.27
CLDND1-227ENST00000513452 UNC93B1Q9H1C4 597 aa13.39□□□□□ -0.27
CLDND1-227ENST00000513452 STAP2Q9UGK3 403 aa13.39□□□□□ -0.27
CLDND1-227ENST00000513452 ADGRA2Q96PE1 1338 aa13.39□□□□□ -0.27
CLDND1-227ENST00000513452 PDHXO00330 501 aa13.38□□□□□ -0.27
CLDND1-227ENST00000513452 APAF1O14727 1248 aa13.38□□□□□ -0.27
CLDND1-227ENST00000513452 GYG1P46976 350 aa13.38□□□□□ -0.27
CLDND1-227ENST00000513452 ANKRD23Q86SG2 305 aa13.38□□□□□ -0.27
CLDND1-227ENST00000513452 TDRD7Q8NHU6 1098 aaKnown RBP13.38□□□□□ -0.27
CLDND1-227ENST00000513452 ZNF594Q96JF6 807 aaPredicted RBP13.38□□□□□ -0.27
CLDND1-227ENST00000513452 GRIK5Q16478 980 aa13.37□□□□□ -0.27
CLDND1-227ENST00000513452 TAF7LQ5H9L4 462 aa13.37□□□□□ -0.27
CLDND1-227ENST00000513452 SLAIN1Q8ND83 568 aa13.37□□□□□ -0.27
CLDND1-227ENST00000513452 TSR2Q969E8 191 aaKnown RBP13.37□□□□□ -0.27
CLDND1-227ENST00000513452 CNNM1Q9NRU3 951 aa13.37□□□□□ -0.27
CLDND1-227ENST00000513452 SGPL1O95470 568 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 HIBADHP31937 336 aaKnown RBP13.36□□□□□ -0.27
CLDND1-227ENST00000513452 FCGRTP55899 365 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 FOXO4P98177 505 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 PPATQ06203 517 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 FLIIQ13045 1269 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 LDHAL6AQ6ZMR3 332 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 DEFB123Q8N688 67 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 LINS1Q8NG48 757 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 DNAAF4Q8WXU2 420 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 HOOK2Q96ED9 719 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 TMOD2Q9NZR1 351 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 GABRQQ9UN88 632 aa13.36□□□□□ -0.27
CLDND1-227ENST00000513452 ELNP15502 786 aa13.35□□□□□ -0.27
CLDND1-227ENST00000513452 INPP5BP32019 993 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms