RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 C1orf229Q6ZS94 237 aaPredicted RBP6.55□□□□□ -1.36
HTT-210ENST00000512909 C8orf86Q6ZUL3 223 aa6.55□□□□□ -1.36
HTT-210ENST00000512909 SULF2Q8IWU5 870 aa6.55□□□□□ -1.36
HTT-210ENST00000512909 CARD10Q9BWT7 1032 aa6.55□□□□□ -1.36
HTT-210ENST00000512909 USP26Q9BXU7 913 aa6.55□□□□□ -1.36
HTT-210ENST00000512909 CAPN10Q9HC96 672 aa6.55□□□□□ -1.36
HTT-210ENST00000512909 PRDM6Q9NQX0 595 aa6.55□□□□□ -1.36
HTT-210ENST00000512909 FAM181BA6NEQ2 426 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 BPNT1O95861 308 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 CELA3AP09093 270 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 LIG3P49916 1009 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 SUZ12Q15022 739 aaKnown RBP6.54□□□□□ -1.36
HTT-210ENST00000512909 POU4F3Q15319 338 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 PCNX4Q63HM2 1172 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 LLGL2Q6P1M3 1020 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 C20orf204Q6ZNR8 217 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 VN1R5Q7Z5H4 357 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 DTWD1Q8N5C7 304 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 ANKRD24Q8TF21 1146 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 MDFIQ99750 246 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 RSRP1Q9BUV0 290 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 MIR1-1HGQ9H1L0 117 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 SOX17Q9H6I2 414 aaPredicted RBP6.54□□□□□ -1.36
HTT-210ENST00000512909 RAD18Q9NS91 495 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 KBTBD4Q9NVX7 518 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 CYP8B1Q9UNU6 501 aa6.54□□□□□ -1.36
HTT-210ENST00000512909 BICRAQ9NZM4 1560 aa6.53□□□□□ -1.36
HTT-210ENST00000512909 SOX1O00570 391 aaPredicted RBP6.53□□□□□ -1.36
HTT-210ENST00000512909 GNB5O14775 395 aa6.53□□□□□ -1.36
HTT-210ENST00000512909 ARNTP27540 789 aa6.53□□□□□ -1.36
HTT-210ENST00000512909 NLRP12P59046 1061 aa6.53□□□□□ -1.36
HTT-210ENST00000512909 ZNF385CQ66K41 422 aaPredicted RBP6.53□□□□□ -1.36
HTT-210ENST00000512909 BEND7Q8N7W2 519 aaPredicted RBP6.53□□□□□ -1.36
HTT-210ENST00000512909 WHAMMQ8TF30 809 aa6.53□□□□□ -1.36
HTT-210ENST00000512909 TMEM74Q96NL1 305 aa6.53□□□□□ -1.36
HTT-210ENST00000512909 SPON2Q9BUD6 331 aa6.53□□□□□ -1.36
HTT-210ENST00000512909 PICK1Q9NRD5 415 aa6.53□□□□□ -1.36
HTT-210ENST00000512909 USP35Q9P2H5 1018 aa6.53□□□□□ -1.36
HTT-210ENST00000512909 PPP1R1BQ9UD71 204 aaPredicted RBP6.53□□□□□ -1.36
HTT-210ENST00000512909 PCDHGB7Q9Y5F8 929 aa6.53□□□□□ -1.36
HTT-210ENST00000512909 F6X3S4 739 aa6.52□□□□□ -1.37
HTT-210ENST00000512909 CD68P34810 354 aaPredicted RBP6.52□□□□□ -1.37
HTT-210ENST00000512909 RPS26P62854 115 aaKnown RBP6.52□□□□□ -1.37
HTT-210ENST00000512909 FAAP100Q0VG06 881 aa6.52□□□□□ -1.37
HTT-210ENST00000512909 ZNF423Q2M1K9 1284 aa6.52□□□□□ -1.37
HTT-210ENST00000512909 ZNF394Q53GI3 561 aa6.52□□□□□ -1.37
HTT-210ENST00000512909 KIAA0825Q8IV33 1275 aa6.52□□□□□ -1.37
HTT-210ENST00000512909 ZSCAN1Q8NBB4 408 aa6.52□□□□□ -1.37
HTT-210ENST00000512909 JARID2Q92833 1246 aaPredicted RBP6.52□□□□□ -1.37
HTT-210ENST00000512909 PLVAPQ9BX97 442 aa6.52□□□□□ -1.37
HTT-210ENST00000512909 ZC3H12CQ9C0D7 883 aaKnown RBP6.52□□□□□ -1.37
HTT-210ENST00000512909 SUPT16HQ9Y5B9 1047 aaKnown RBP6.52□□□□□ -1.37
HTT-210ENST00000512909 UNC13AQ9UPW8 1703 aa6.51□□□□□ -1.37
HTT-210ENST00000512909 ENC1O14682 589 aa6.51□□□□□ -1.37
HTT-210ENST00000512909 APBA3O96018 575 aa6.51□□□□□ -1.37
HTT-210ENST00000512909 EIF4A3P38919 411 aaKnown RBP6.51□□□□□ -1.37
HTT-210ENST00000512909 SF3A1Q15459 793 aaKnown RBP6.51□□□□□ -1.37
HTT-210ENST00000512909 DUOXA2Q1HG44 320 aa6.51□□□□□ -1.37
HTT-210ENST00000512909 NAALADL2Q58DX5 795 aa6.51□□□□□ -1.37
HTT-210ENST00000512909 MAP1SQ66K74 1059 aaPredicted RBP6.51□□□□□ -1.37
HTT-210ENST00000512909 SCARF2Q96GP6 870 aaPredicted RBP6.51□□□□□ -1.37
HTT-210ENST00000512909 GSTP1P09211 210 aaKnown RBP6.5□□□□□ -1.37
HTT-210ENST00000512909 SLFN14P0C7P3 912 aa6.5□□□□□ -1.37
HTT-210ENST00000512909 MAOBP27338 520 aa6.5□□□□□ -1.37
HTT-210ENST00000512909 DGKGP49619 791 aa6.5□□□□□ -1.37
HTT-210ENST00000512909 FAM160A1Q05DH4 1040 aa6.5□□□□□ -1.37
HTT-210ENST00000512909 GRIK5Q16478 980 aa6.5□□□□□ -1.37
HTT-210ENST00000512909 ERMP1Q7Z2K6 904 aa6.5□□□□□ -1.37
HTT-210ENST00000512909 KLHDC7BQ96G42 594 aa6.5□□□□□ -1.37
HTT-210ENST00000512909 SPATA32Q96LK8 384 aa6.5□□□□□ -1.37
HTT-210ENST00000512909 C8orf37Q96NL8 207 aa6.5□□□□□ -1.37
HTT-210ENST00000512909 TRIM56Q9BRZ2 755 aaKnown RBP6.5□□□□□ -1.37
HTT-210ENST00000512909 ACBD3Q9H3P7 528 aa6.5□□□□□ -1.37
HTT-210ENST00000512909 COPRSQ9NQ92 184 aa6.5□□□□□ -1.37
HTT-210ENST00000512909 DDX41Q9UJV9 622 aaKnown RBP6.5□□□□□ -1.37
HTT-210ENST00000512909 PF4P02776 101 aa6.49□□□□□ -1.37
HTT-210ENST00000512909 NID1P14543 1247 aa6.49□□□□□ -1.37
HTT-210ENST00000512909 LMNB2Q03252 620 aa6.49□□□□□ -1.37
HTT-210ENST00000512909 CAMK2GQ13555 558 aaPredicted RBP6.49□□□□□ -1.37
HTT-210ENST00000512909 LCE2CQ5TA81 110 aa6.49□□□□□ -1.37
HTT-210ENST00000512909 AGMOQ6ZNB7 445 aa6.49□□□□□ -1.37
HTT-210ENST00000512909 METTL16Q86W50 562 aaKnown RBP6.49□□□□□ -1.37
HTT-210ENST00000512909 GOLM1Q8NBJ4 401 aa6.49□□□□□ -1.37
HTT-210ENST00000512909 CPLX3Q8WVH0 158 aa6.49□□□□□ -1.37
HTT-210ENST00000512909 ELMO3Q96BJ8 720 aa6.49□□□□□ -1.37
HTT-210ENST00000512909 NACC1Q96RE7 527 aa6.49□□□□□ -1.37
HTT-210ENST00000512909 IGSF5Q9NSI5 407 aa6.49□□□□□ -1.37
HTT-210ENST00000512909 USP21Q9UK80 565 aa6.49□□□□□ -1.37
HTT-210ENST00000512909 TLR6Q9Y2C9 796 aa6.49□□□□□ -1.37
HTT-210ENST00000512909 A0A0A0MRY4 1105 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 PAGE1O75459 146 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 DNAJA1P31689 397 aaKnown RBP6.48□□□□□ -1.37
HTT-210ENST00000512909 MCM4P33991 863 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 BAG6P46379 1132 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 ARID5AQ03989 594 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 APOBRQ0VD83 1088 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 MLECQ14165 292 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 SETDB1Q15047 1291 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 CWF19L2Q2TBE0 894 aaKnown RBP6.48□□□□□ -1.37
HTT-210ENST00000512909 LDLRAD1Q5T700 205 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms