RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 ATP5J2-PTCD1G3V325 749 aa12.84□□□□□ -0.35
NEDD9-213ENST00000512665 ADCY3O60266 1144 aa12.84□□□□□ -0.35
NEDD9-213ENST00000512665 PDE8AO60658 829 aa12.84□□□□□ -0.35
NEDD9-213ENST00000512665 FKBP1AP62942 108 aaKnown RBP12.84□□□□□ -0.35
NEDD9-213ENST00000512665 GTF2IP78347 998 aa12.84□□□□□ -0.35
NEDD9-213ENST00000512665 PPIL2Q13356 520 aa12.84□□□□□ -0.35
NEDD9-213ENST00000512665 RTL5Q5HYW3 569 aaPredicted RBP12.84□□□□□ -0.35
NEDD9-213ENST00000512665 ANKRD23Q86SG2 305 aa12.84□□□□□ -0.35
NEDD9-213ENST00000512665 TXNRD3Q86VQ6 643 aa12.84□□□□□ -0.35
NEDD9-213ENST00000512665 DIS3LQ8TF46 1054 aaKnown RBP12.84□□□□□ -0.35
NEDD9-213ENST00000512665 PRMT6Q96LA8 375 aaPredicted RBP12.84□□□□□ -0.35
NEDD9-213ENST00000512665 NBPF3Q9H094 633 aa12.84□□□□□ -0.35
NEDD9-213ENST00000512665 VEZTQ9HBM0 779 aa12.84□□□□□ -0.35
NEDD9-213ENST00000512665 MINPP1Q9UNW1 487 aa12.84□□□□□ -0.35
NEDD9-213ENST00000512665 MGAMO43451 1857 aa12.84□□□□□ -0.35
NEDD9-213ENST00000512665 PIEZO1Q92508 2521 aa12.84□□□□□ -0.35
NEDD9-213ENST00000512665 SYN1P17600 705 aa12.83□□□□□ -0.36
NEDD9-213ENST00000512665 MAP3K12Q12852 859 aa12.83□□□□□ -0.36
NEDD9-213ENST00000512665 CFAP100Q494V2 611 aa12.83□□□□□ -0.36
NEDD9-213ENST00000512665 CERS5Q8N5B7 392 aa12.83□□□□□ -0.36
NEDD9-213ENST00000512665 ZNF428Q96B54 188 aa12.83□□□□□ -0.36
NEDD9-213ENST00000512665 SNCAIPQ9Y6H5 919 aa12.83□□□□□ -0.36
NEDD9-213ENST00000512665 TMEM265A0A087WTH1 108 aa12.82□□□□□ -0.36
NEDD9-213ENST00000512665 IRF6O14896 467 aa12.82□□□□□ -0.36
NEDD9-213ENST00000512665 BCRP11274 1271 aa12.82□□□□□ -0.36
NEDD9-213ENST00000512665 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
NEDD9-213ENST00000512665 PCDHAC2Q9Y5I4 1007 aa12.82□□□□□ -0.36
NEDD9-213ENST00000512665 PCCAP05165 728 aaPredicted RBP12.81□□□□□ -0.36
NEDD9-213ENST00000512665 NEFMP07197 916 aa12.81□□□□□ -0.36
NEDD9-213ENST00000512665 NFE2L2Q16236 605 aa12.81□□□□□ -0.36
NEDD9-213ENST00000512665 FAM161BQ96MY7 647 aa12.81□□□□□ -0.36
NEDD9-213ENST00000512665 GABRQQ9UN88 632 aa12.81□□□□□ -0.36
NEDD9-213ENST00000512665 DDX60LQ5H9U9 1706 aaKnown RBP12.81□□□□□ -0.36
NEDD9-213ENST00000512665 BDP1A6H8Y1 2624 aa12.81□□□□□ -0.36
NEDD9-213ENST00000512665 AOX1Q06278 1338 aa12.81□□□□□ -0.36
NEDD9-213ENST00000512665 PDHXO00330 501 aa12.8□□□□□ -0.36
NEDD9-213ENST00000512665 FLT3LGP49771 235 aa12.8□□□□□ -0.36
NEDD9-213ENST00000512665 PARK7Q99497 189 aaKnown RBP12.8□□□□□ -0.36
NEDD9-213ENST00000512665 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.8□□□□□ -0.36
NEDD9-213ENST00000512665 C11orf49Q9H6J7 331 aa12.8□□□□□ -0.36
NEDD9-213ENST00000512665 CD209Q9NNX6 404 aa12.8□□□□□ -0.36
NEDD9-213ENST00000512665 CHPF2Q9P2E5 772 aa12.8□□□□□ -0.36
NEDD9-213ENST00000512665 ELNP15502 786 aa12.79□□□□□ -0.36
NEDD9-213ENST00000512665 PPATQ06203 517 aa12.79□□□□□ -0.36
NEDD9-213ENST00000512665 CCDC191Q8NCU4 936 aa12.79□□□□□ -0.36
NEDD9-213ENST00000512665 SEMA6BQ9H3T3 888 aa12.79□□□□□ -0.36
NEDD9-213ENST00000512665 NCOR1O75376 2440 aa12.79□□□□□ -0.36
NEDD9-213ENST00000512665 ECM2O94769 699 aaPredicted RBP12.78□□□□□ -0.36
NEDD9-213ENST00000512665 HOXB7P09629 217 aa12.78□□□□□ -0.36
NEDD9-213ENST00000512665 KLRK1P26718 216 aa12.78□□□□□ -0.36
NEDD9-213ENST00000512665 CTSWP56202 376 aa12.78□□□□□ -0.36
NEDD9-213ENST00000512665 C15orf52Q6ZUT6 534 aaKnown RBP12.78□□□□□ -0.36
NEDD9-213ENST00000512665 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
NEDD9-213ENST00000512665 PLEKHF1Q96S99 279 aa12.78□□□□□ -0.36
NEDD9-213ENST00000512665 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
NEDD9-213ENST00000512665 DBF4Q9UBU7 674 aaPredicted RBP12.78□□□□□ -0.36
NEDD9-213ENST00000512665 ZNF70Q9UC06 446 aaPredicted RBP12.78□□□□□ -0.36
NEDD9-213ENST00000512665 KCNH4Q9UQ05 1017 aa12.78□□□□□ -0.36
NEDD9-213ENST00000512665 SPEF2Q9C093 1822 aa12.78□□□□□ -0.36
NEDD9-213ENST00000512665 TNNI2P48788 182 aa12.77□□□□□ -0.37
NEDD9-213ENST00000512665 MOGSQ13724 837 aa12.77□□□□□ -0.37
NEDD9-213ENST00000512665 SNX27Q96L92 541 aa12.77□□□□□ -0.37
NEDD9-213ENST00000512665 HYPKQ9NX55 129 aa12.77□□□□□ -0.37
NEDD9-213ENST00000512665 SERPINA10Q9UK55 444 aa12.77□□□□□ -0.37
NEDD9-213ENST00000512665 OGDHLQ9ULD0 1010 aa12.77□□□□□ -0.37
NEDD9-213ENST00000512665 IL1R1P14778 569 aa12.76□□□□□ -0.37
NEDD9-213ENST00000512665 FOSL2P15408 326 aa12.76□□□□□ -0.37
NEDD9-213ENST00000512665 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.76□□□□□ -0.37
NEDD9-213ENST00000512665 MYLIPQ8WY64 445 aa12.76□□□□□ -0.37
NEDD9-213ENST00000512665 HOOK2Q96ED9 719 aa12.76□□□□□ -0.37
NEDD9-213ENST00000512665 CCDC85AQ96PX6 553 aaPredicted RBP12.76□□□□□ -0.37
NEDD9-213ENST00000512665 WRNIP1Q96S55 665 aa12.76□□□□□ -0.37
NEDD9-213ENST00000512665 TMEM39BQ9GZU3 492 aa12.76□□□□□ -0.37
NEDD9-213ENST00000512665 PFASO15067 1338 aa12.76□□□□□ -0.37
NEDD9-213ENST00000512665 MYH3P11055 1940 aa12.76□□□□□ -0.37
NEDD9-213ENST00000512665 COL6A1P12109 1028 aa12.75□□□□□ -0.37
NEDD9-213ENST00000512665 TTLL11Q8NHH1 800 aa12.75□□□□□ -0.37
NEDD9-213ENST00000512665 C1QTNF1Q9BXJ1 281 aa12.75□□□□□ -0.37
NEDD9-213ENST00000512665 DNAH12Q6ZR08 3092 aa12.74□□□□□ -0.37
NEDD9-213ENST00000512665 RPAP1Q9BWH6 1393 aaPredicted RBP12.74□□□□□ -0.37
NEDD9-213ENST00000512665 F8W031 263 aaPredicted RBP12.74□□□□□ -0.37
NEDD9-213ENST00000512665 TNPO2O14787 897 aaKnown RBP12.74□□□□□ -0.37
NEDD9-213ENST00000512665 HMGCRP04035 888 aa12.74□□□□□ -0.37
NEDD9-213ENST00000512665 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.37
NEDD9-213ENST00000512665 SMAD3P84022 425 aaKnown RBP12.74□□□□□ -0.37
NEDD9-213ENST00000512665 MDM2Q00987 491 aaPredicted RBP12.74□□□□□ -0.37
NEDD9-213ENST00000512665 HDGFL1Q5TGJ6 251 aa12.74□□□□□ -0.37
NEDD9-213ENST00000512665 ATXN2LQ8WWM7 1075 aaKnown RBP12.74□□□□□ -0.37
NEDD9-213ENST00000512665 ZKSCAN4Q969J2 545 aaPredicted RBP12.74□□□□□ -0.37
NEDD9-213ENST00000512665 TTYH1Q9H313 450 aaPredicted RBP12.74□□□□□ -0.37
NEDD9-213ENST00000512665 CWC25Q9NXE8 425 aaPredicted RBP12.74□□□□□ -0.37
NEDD9-213ENST00000512665 GREM2Q9H772 168 aa12.73□□□□□ -0.37
NEDD9-213ENST00000512665 TDRD3Q9H7E2 651 aaKnown RBP12.73□□□□□ -0.37
NEDD9-213ENST00000512665 HMX1Q9NP08 348 aaPredicted RBP12.73□□□□□ -0.37
NEDD9-213ENST00000512665 SLC45A1Q9Y2W3 748 aa12.73□□□□□ -0.37
NEDD9-213ENST00000512665 MAST2Q6P0Q8 1798 aa12.72□□□□□ -0.37
NEDD9-213ENST00000512665 TCP10L2B9ZVM9 353 aa12.72□□□□□ -0.37
NEDD9-213ENST00000512665 PPP2R1AP30153 589 aa12.72□□□□□ -0.37
NEDD9-213ENST00000512665 IGHMBP2P38935 993 aaKnown RBP12.72□□□□□ -0.37
NEDD9-213ENST00000512665 GOLGA2Q08379 1002 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms