RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 PSAPP07602 524 aa7.56□□□□□ -1.2
MSH3-202ENST00000512258 HDGFL1Q5TGJ6 251 aa7.56□□□□□ -1.2
MSH3-202ENST00000512258 TXNDC11Q6PKC3 985 aa7.56□□□□□ -1.2
MSH3-202ENST00000512258 COL26A1Q96A83 441 aa7.56□□□□□ -1.2
MSH3-202ENST00000512258 FAM83CQ9BQN1 747 aa7.56□□□□□ -1.2
MSH3-202ENST00000512258 MUC3BQ9H195 1237 aa7.56□□□□□ -1.2
MSH3-202ENST00000512258 LRFN2Q9ULH4 789 aa7.56□□□□□ -1.2
MSH3-202ENST00000512258 RBM19Q9Y4C8 960 aaKnown RBP7.56□□□□□ -1.2
MSH3-202ENST00000512258 NUP155O75694 1391 aa7.56□□□□□ -1.2
MSH3-202ENST00000512258 PZPP20742 1482 aa7.55□□□□□ -1.2
MSH3-202ENST00000512258 C8AP07357 584 aa7.55□□□□□ -1.2
MSH3-202ENST00000512258 C11orf91Q3C1V1 193 aa7.55□□□□□ -1.2
MSH3-202ENST00000512258 CBLL1Q75N03 491 aa7.55□□□□□ -1.2
MSH3-202ENST00000512258 CLEC10AQ8IUN9 316 aa7.55□□□□□ -1.2
MSH3-202ENST00000512258 FAM20CQ8IXL6 584 aa7.55□□□□□ -1.2
MSH3-202ENST00000512258 CACTIN-AS1Q8N1I8 211 aa7.55□□□□□ -1.2
MSH3-202ENST00000512258 HINFPQ9BQA5 517 aa7.55□□□□□ -1.2
MSH3-202ENST00000512258 PRDM15P57071 1507 aaPredicted RBP7.55□□□□□ -1.2
MSH3-202ENST00000512258 CEP152O94986 1710 aa7.55□□□□□ -1.2
MSH3-202ENST00000512258 VWDEQ8N2E2 1590 aa7.54□□□□□ -1.2
MSH3-202ENST00000512258 ADAM11O75078 769 aa7.54□□□□□ -1.2
MSH3-202ENST00000512258 CRTC2Q53ET0 693 aaPredicted RBP7.54□□□□□ -1.2
MSH3-202ENST00000512258 COL13A1Q5TAT6 717 aaPredicted RBP7.54□□□□□ -1.2
MSH3-202ENST00000512258 POU5F2Q8N7G0 328 aa7.54□□□□□ -1.2
MSH3-202ENST00000512258 FOXD4L4Q8WXT5 416 aaPredicted RBP7.54□□□□□ -1.2
MSH3-202ENST00000512258 ABCC3O15438 1527 aa7.53□□□□□ -1.2
MSH3-202ENST00000512258 KDM5DQ9BY66 1539 aa7.53□□□□□ -1.2
MSH3-202ENST00000512258 FAM135AQ9P2D6 1515 aa7.53□□□□□ -1.2
MSH3-202ENST00000512258 IQGAP3Q86VI3 1631 aa7.53□□□□□ -1.2
MSH3-202ENST00000512258 DPYDQ12882 1025 aa7.53□□□□□ -1.2
MSH3-202ENST00000512258 PTK7Q13308 1070 aa7.53□□□□□ -1.2
MSH3-202ENST00000512258 COL19A1Q14993 1142 aa7.53□□□□□ -1.2
MSH3-202ENST00000512258 RGL4Q8IZJ4 473 aa7.53□□□□□ -1.2
MSH3-202ENST00000512258 CMTR1Q8N1G2 835 aaKnown RBP7.53□□□□□ -1.2
MSH3-202ENST00000512258 CARD10Q9BWT7 1032 aa7.53□□□□□ -1.2
MSH3-202ENST00000512258 KRTAP4-11Q9BYQ6 195 aa7.53□□□□□ -1.2
MSH3-202ENST00000512258 CLTCQ00610 1675 aaKnown RBP7.53□□□□□ -1.2
MSH3-202ENST00000512258 WASHC2CQ9Y4E1 1318 aa7.52□□□□□ -1.2
MSH3-202ENST00000512258 MADDQ8WXG6 1647 aa7.52□□□□□ -1.2
MSH3-202ENST00000512258 ADAMTSL3P82987 1691 aa7.52□□□□□ -1.21
MSH3-202ENST00000512258 DHX57Q6P158 1386 aaKnown RBP7.52□□□□□ -1.21
MSH3-202ENST00000512258 DDX3YO15523 660 aaKnown RBP7.52□□□□□ -1.21
MSH3-202ENST00000512258 WEE1P30291 646 aa7.52□□□□□ -1.21
MSH3-202ENST00000512258 ATP11AP98196 1134 aa7.52□□□□□ -1.21
MSH3-202ENST00000512258 TRIP4Q15650 581 aaPredicted RBP7.52□□□□□ -1.21
MSH3-202ENST00000512258 MSMPQ1L6U9 139 aa7.52□□□□□ -1.21
MSH3-202ENST00000512258 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.52□□□□□ -1.21
MSH3-202ENST00000512258 MPHOSPH9Q99550 1183 aa7.52□□□□□ -1.21
MSH3-202ENST00000512258 KANK1Q14678 1352 aa7.51□□□□□ -1.21
MSH3-202ENST00000512258 CEBPAP49715 358 aaPredicted RBP7.51□□□□□ -1.21
MSH3-202ENST00000512258 BEND4Q6ZU67 534 aa7.51□□□□□ -1.21
MSH3-202ENST00000512258 TREML1Q86YW5 311 aa7.51□□□□□ -1.21
MSH3-202ENST00000512258 WWC1Q8IX03 1113 aa7.51□□□□□ -1.21
MSH3-202ENST00000512258 UBASH3BQ8TF42 649 aa7.51□□□□□ -1.21
MSH3-202ENST00000512258 RBSNQ9H1K0 784 aa7.51□□□□□ -1.21
MSH3-202ENST00000512258 MAFBQ9Y5Q3 323 aaPredicted RBP7.51□□□□□ -1.21
MSH3-202ENST00000512258 CAMSAP1Q5T5Y3 1602 aa7.51□□□□□ -1.21
MSH3-202ENST00000512258 LMTK2Q8IWU2 1503 aa7.51□□□□□ -1.21
MSH3-202ENST00000512258 FER1L4A9Z1Z3 1794 aa7.51□□□□□ -1.21
MSH3-202ENST00000512258 RIMS1Q86UR5 1692 aaKnown RBP7.51□□□□□ -1.21
MSH3-202ENST00000512258 BMP3P12645 472 aa7.5□□□□□ -1.21
MSH3-202ENST00000512258 ITGB5P18084 799 aa7.5□□□□□ -1.21
MSH3-202ENST00000512258 PREPP48147 710 aa7.5□□□□□ -1.21
MSH3-202ENST00000512258 LACRTQ9GZZ8 138 aa7.5□□□□□ -1.21
MSH3-202ENST00000512258 EFCAB6Q5THR3 1501 aa7.5□□□□□ -1.21
MSH3-202ENST00000512258 E9PCH4 1651 aa7.5□□□□□ -1.21
MSH3-202ENST00000512258 TET3O43151 1660 aa7.5□□□□□ -1.21
MSH3-202ENST00000512258 ZMYM3Q14202 1370 aa7.49□□□□□ -1.21
MSH3-202ENST00000512258 ZC3H13Q5T200 1668 aaKnown RBP7.49□□□□□ -1.21
MSH3-202ENST00000512258 WDR64B1ANS9 1081 aa7.49□□□□□ -1.21
MSH3-202ENST00000512258 FSCN2O14926 492 aa7.49□□□□□ -1.21
MSH3-202ENST00000512258 FOXO3O43524 673 aa7.49□□□□□ -1.21
MSH3-202ENST00000512258 DUOXA2Q1HG44 320 aa7.49□□□□□ -1.21
MSH3-202ENST00000512258 PIM2Q9P1W9 311 aa7.49□□□□□ -1.21
MSH3-202ENST00000512258 TFIP11Q9UBB9 837 aaKnown RBP7.49□□□□□ -1.21
MSH3-202ENST00000512258 NPATQ14207 1427 aa7.49□□□□□ -1.21
MSH3-202ENST00000512258 PLA2R1Q13018 1463 aa7.49□□□□□ -1.21
MSH3-202ENST00000512258 CDC27P30260 824 aa7.48□□□□□ -1.21
MSH3-202ENST00000512258 NLRP13Q86W25 1043 aa7.48□□□□□ -1.21
MSH3-202ENST00000512258 OR13H1Q8NG92 308 aa7.48□□□□□ -1.21
MSH3-202ENST00000512258 KLHDC7BQ96G42 594 aa7.48□□□□□ -1.21
MSH3-202ENST00000512258 ARXQ96QS3 562 aa7.48□□□□□ -1.21
MSH3-202ENST00000512258 CFAP65Q6ZU64 1925 aaKnown RBP7.48□□□□□ -1.21
MSH3-202ENST00000512258 C3P01024 1663 aa7.47□□□□□ -1.21
MSH3-202ENST00000512258 UGGT1Q9NYU2 1555 aa7.47□□□□□ -1.21
MSH3-202ENST00000512258 PRNPP04156 253 aa7.47□□□□□ -1.21
MSH3-202ENST00000512258 EPHA1P21709 976 aa7.47□□□□□ -1.21
MSH3-202ENST00000512258 CDC25BP30305 580 aa7.47□□□□□ -1.21
MSH3-202ENST00000512258 CEP135Q66GS9 1140 aa7.47□□□□□ -1.21
MSH3-202ENST00000512258 LARP1Q6PKG0 1096 aaKnown RBP7.47□□□□□ -1.21
MSH3-202ENST00000512258 ANKMY2Q8IV38 441 aa7.47□□□□□ -1.21
MSH3-202ENST00000512258 KLHL23Q8NBE8 558 aa7.47□□□□□ -1.21
MSH3-202ENST00000512258 MFSD14AQ96MC6 490 aa7.47□□□□□ -1.21
MSH3-202ENST00000512258 CCDC39Q9UFE4 941 aa7.47□□□□□ -1.21
MSH3-202ENST00000512258 MROH2AA6NES4 1674 aa7.47□□□□□ -1.21
MSH3-202ENST00000512258 SYNMO15061 1565 aa7.46□□□□□ -1.21
MSH3-202ENST00000512258 ARHGAP31Q2M1Z3 1444 aa7.46□□□□□ -1.21
MSH3-202ENST00000512258 CNTLNQ9NXG0 1405 aa7.46□□□□□ -1.21
MSH3-202ENST00000512258 F13BP05160 661 aa7.46□□□□□ -1.22
MSH3-202ENST00000512258 FAM26DQ5JW98 314 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms