RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 WBP1LQ9NX94 342 aa19.94■□□□□ 0.78
PDLIM5-216ENST00000511767 ZNF70Q9UC06 446 aaPredicted RBP19.94■□□□□ 0.78
PDLIM5-216ENST00000511767 HSPA1AP0DMV8 641 aaKnown RBP19.93■□□□□ 0.78
PDLIM5-216ENST00000511767 HSPA1BP0DMV9 641 aaKnown RBP19.93■□□□□ 0.78
PDLIM5-216ENST00000511767 MAP2K2P36507 400 aa19.93■□□□□ 0.78
PDLIM5-216ENST00000511767 FKBP1BP68106 108 aa19.93■□□□□ 0.78
PDLIM5-216ENST00000511767 SPDYE2Q495Y8 402 aa19.93■□□□□ 0.78
PDLIM5-216ENST00000511767 APOBEC3HQ6NTF7 200 aaKnown RBP19.93■□□□□ 0.78
PDLIM5-216ENST00000511767 RGMBQ6NW40 437 aa19.93■□□□□ 0.78
PDLIM5-216ENST00000511767 HHIPL2Q6UWX4 724 aa19.93■□□□□ 0.78
PDLIM5-216ENST00000511767 PAXIP1Q6ZW49 1069 aaPredicted RBP19.93■□□□□ 0.78
PDLIM5-216ENST00000511767 MOB2Q70IA6 237 aa19.93■□□□□ 0.78
PDLIM5-216ENST00000511767 RPAP2Q8IXW5 612 aaPredicted RBP19.93■□□□□ 0.78
PDLIM5-216ENST00000511767 UBE2Q2LH0YL09 131 aa19.92■□□□□ 0.78
PDLIM5-216ENST00000511767 AOC2O75106 756 aa19.92■□□□□ 0.78
PDLIM5-216ENST00000511767 SIRT2Q8IXJ6 389 aa19.92■□□□□ 0.78
PDLIM5-216ENST00000511767 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.92■□□□□ 0.78
PDLIM5-216ENST00000511767 TEKT1Q969V4 418 aa19.92■□□□□ 0.78
PDLIM5-216ENST00000511767 ZDHHC15Q96MV8 337 aa19.92■□□□□ 0.78
PDLIM5-216ENST00000511767 SALL1Q9NSC2 1324 aa19.92■□□□□ 0.78
PDLIM5-216ENST00000511767 FAM155AB1AL88 458 aaPredicted RBP19.91■□□□□ 0.78
PDLIM5-216ENST00000511767 GRM1Q13255 1194 aa19.91■□□□□ 0.78
PDLIM5-216ENST00000511767 RASGRF1Q13972 1273 aa19.91■□□□□ 0.78
PDLIM5-216ENST00000511767 RASA3Q14644 834 aa19.91■□□□□ 0.78
PDLIM5-216ENST00000511767 ZIC5Q96T25 663 aa19.91■□□□□ 0.78
PDLIM5-216ENST00000511767 CHMP4BQ9H444 224 aaKnown RBP19.91■□□□□ 0.78
PDLIM5-216ENST00000511767 VEZTQ9HBM0 779 aa19.91■□□□□ 0.78
PDLIM5-216ENST00000511767 OS9Q13438 667 aaPredicted RBP19.9■□□□□ 0.78
PDLIM5-216ENST00000511767 TNNI3KQ59H18 835 aa19.9■□□□□ 0.78
PDLIM5-216ENST00000511767 CCDC102AQ96A19 550 aa19.9■□□□□ 0.78
PDLIM5-216ENST00000511767 YTHDC1Q96MU7 727 aaKnown RBP19.9■□□□□ 0.78
PDLIM5-216ENST00000511767 FPGT-TNNI3KV9GXZ4 949 aa19.9■□□□□ 0.78
PDLIM5-216ENST00000511767 COL1A1P02452 1464 aaPredicted RBP19.89■□□□□ 0.77
PDLIM5-216ENST00000511767 PRDX5P30044 214 aa19.89■□□□□ 0.77
PDLIM5-216ENST00000511767 ZNF157P51786 506 aaPredicted RBP19.89■□□□□ 0.77
PDLIM5-216ENST00000511767 MAP2K1Q02750 393 aaPredicted RBP19.89■□□□□ 0.77
PDLIM5-216ENST00000511767 GORABQ5T7V8 394 aa19.89■□□□□ 0.77
PDLIM5-216ENST00000511767 NBPF12Q5TAG4 269 aaPredicted RBP19.89■□□□□ 0.77
PDLIM5-216ENST00000511767 HMG20BQ9P0W2 317 aa19.89■□□□□ 0.77
PDLIM5-216ENST00000511767 PPP2R3BQ9Y5P8 575 aa19.89■□□□□ 0.77
PDLIM5-216ENST00000511767 PDS5AQ29RF7 1337 aaKnown RBP19.88■□□□□ 0.77
PDLIM5-216ENST00000511767 LDHBP07195 334 aaKnown RBP19.88■□□□□ 0.77
PDLIM5-216ENST00000511767 NF2P35240 595 aa19.88■□□□□ 0.77
PDLIM5-216ENST00000511767 SUPT20HL1Q3ZLR7 823 aa19.88■□□□□ 0.77
PDLIM5-216ENST00000511767 LDLRAD1Q5T700 205 aa19.88■□□□□ 0.77
PDLIM5-216ENST00000511767 EAF2Q96CJ1 260 aaPredicted RBP19.88■□□□□ 0.77
PDLIM5-216ENST00000511767 MAST3O60307 1309 aa19.87■□□□□ 0.77
PDLIM5-216ENST00000511767 ARID4AP29374 1257 aaPredicted RBP19.87■□□□□ 0.77
PDLIM5-216ENST00000511767 DIXDC1Q155Q3 683 aa19.87■□□□□ 0.77
PDLIM5-216ENST00000511767 ZGPATQ8N5A5 531 aaKnown RBP19.87■□□□□ 0.77
PDLIM5-216ENST00000511767 TEPSINQ96N21 525 aa19.87■□□□□ 0.77
PDLIM5-216ENST00000511767 DBNDD2Q9BQY9 259 aa19.87■□□□□ 0.77
PDLIM5-216ENST00000511767 EXOC6BQ9Y2D4 811 aa19.87■□□□□ 0.77
PDLIM5-216ENST00000511767 TCP10L2B9ZVM9 353 aa19.86■□□□□ 0.77
PDLIM5-216ENST00000511767 FOXN1O15353 648 aa19.86■□□□□ 0.77
PDLIM5-216ENST00000511767 USP2O75604 605 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-216ENST00000511767 UQCRFS1P1P0C7P4 283 aa19.86■□□□□ 0.77
PDLIM5-216ENST00000511767 NOGQ13253 232 aa19.86■□□□□ 0.77
PDLIM5-216ENST00000511767 PRKG1Q13976 671 aa19.86■□□□□ 0.77
PDLIM5-216ENST00000511767 TTLL12Q14166 644 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-216ENST00000511767 FKBP1CQ5VVH2 108 aa19.86■□□□□ 0.77
PDLIM5-216ENST00000511767 SPATA5Q8NB90 893 aa19.86■□□□□ 0.77
PDLIM5-216ENST00000511767 FAM163AQ96GL9 167 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-216ENST00000511767 CCDC8Q9H0W5 538 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-216ENST00000511767 DAGLAQ9Y4D2 1042 aa19.86■□□□□ 0.77
PDLIM5-216ENST00000511767 KIF23Q02241 960 aaPredicted RBP19.85■□□□□ 0.77
PDLIM5-216ENST00000511767 TNFAIP1Q13829 316 aa19.85■□□□□ 0.77
PDLIM5-216ENST00000511767 MAP3K11Q16584 847 aa19.85■□□□□ 0.77
PDLIM5-216ENST00000511767 SPTY2D1Q68D10 685 aaPredicted RBP19.85■□□□□ 0.77
PDLIM5-216ENST00000511767 TBC1D9Q6ZT07 1266 aa19.85■□□□□ 0.77
PDLIM5-216ENST00000511767 ARMC9Q7Z3E5 817 aa19.85■□□□□ 0.77
PDLIM5-216ENST00000511767 ZNF512BQ96KM6 892 aaPredicted RBP19.85■□□□□ 0.77
PDLIM5-216ENST00000511767 ABCF2Q9UG63 623 aa19.85■□□□□ 0.77
PDLIM5-216ENST00000511767 FZD1Q9UP38 647 aa19.85■□□□□ 0.77
PDLIM5-216ENST00000511767 SLC10A3P09131 477 aa19.84■□□□□ 0.77
PDLIM5-216ENST00000511767 MCAMP43121 646 aa19.84■□□□□ 0.77
PDLIM5-216ENST00000511767 CACNB3P54284 484 aa19.84■□□□□ 0.77
PDLIM5-216ENST00000511767 HSP90AB4PQ58FF6 505 aa19.84■□□□□ 0.77
PDLIM5-216ENST00000511767 CCDC158Q5M9N0 1113 aa19.84■□□□□ 0.77
PDLIM5-216ENST00000511767 CDC42EP5Q6NZY7 148 aa19.84■□□□□ 0.77
PDLIM5-216ENST00000511767 PI16Q6UXB8 463 aa19.84■□□□□ 0.77
PDLIM5-216ENST00000511767 ERC1Q8IUD2 1116 aa19.84■□□□□ 0.77
PDLIM5-216ENST00000511767 ANGEL1Q9UNK9 670 aaKnown RBP19.84■□□□□ 0.77
PDLIM5-216ENST00000511767 PPP1R12BO60237 982 aaPredicted RBP19.83■□□□□ 0.77
PDLIM5-216ENST00000511767 HMMRO75330 724 aa19.83■□□□□ 0.77
PDLIM5-216ENST00000511767 TNNI2P48788 182 aa19.83■□□□□ 0.77
PDLIM5-216ENST00000511767 ERICH6Q7L0X2 663 aa19.83■□□□□ 0.77
PDLIM5-216ENST00000511767 FAM83AQ86UY5 434 aa19.83■□□□□ 0.77
PDLIM5-216ENST00000511767 CDAN1Q8IWY9 1227 aa19.83■□□□□ 0.77
PDLIM5-216ENST00000511767 RHPN1Q8TCX5 695 aa19.83■□□□□ 0.77
PDLIM5-216ENST00000511767 ZNF384Q8TF68 577 aa19.83■□□□□ 0.77
PDLIM5-216ENST00000511767 CSRNP1Q96S65 589 aa19.83■□□□□ 0.77
PDLIM5-216ENST00000511767 TMEM39BQ9GZU3 492 aa19.83■□□□□ 0.77
PDLIM5-216ENST00000511767 USP40Q9NVE5 1235 aa19.83■□□□□ 0.77
PDLIM5-216ENST00000511767 DBNLQ9UJU6 430 aaKnown RBP19.83■□□□□ 0.77
PDLIM5-216ENST00000511767 COL13A1Q5TAT6 717 aaPredicted RBP19.82■□□□□ 0.76
PDLIM5-216ENST00000511767 RASAL3Q86YV0 1011 aa19.82■□□□□ 0.76
PDLIM5-216ENST00000511767 AIDAQ96BJ3 306 aa19.82■□□□□ 0.76
PDLIM5-216ENST00000511767 SNRKQ9NRH2 765 aa19.82■□□□□ 0.76
PDLIM5-216ENST00000511767 UNCXA6NJT0 531 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms