RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 KLF15Q9UIH9 416 aa8.12□□□□□ -1.11
HMGB1P47-201ENST00000511281 NAGPAQ9UK23 515 aa8.12□□□□□ -1.11
HMGB1P47-201ENST00000511281 ZNF252P-AS1Q0IIN9 211 aa8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 PERM1Q5SV97 790 aa8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 EGFLAMQ63HQ2 1017 aa8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 ADAMTSL4Q6UY14 1074 aa8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 SV2AQ7L0J3 742 aa8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 FAM35AQ86V20 835 aa8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 RBBP8NLQ8NC74 664 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 OR6P1Q8NGX9 317 aa8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 GAL3ST3Q96A11 431 aa8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 LPIN3Q9BQK8 851 aa8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 EMILIN2Q9BXX0 1053 aa8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 SOX17Q9H6I2 414 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 PCDHB5Q9Y5E4 795 aa8.11□□□□□ -1.11
HMGB1P47-201ENST00000511281 EIF4EBP3O60516 100 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 ESRRAP11474 423 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 BMP4P12644 408 aa8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 ARNTP27540 789 aa8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 ADH6P28332 368 aa8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 ADH7P40394 386 aa8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 GIPRP48546 466 aa8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 BMS1Q14692 1282 aaKnown RBP8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 CWF19L2Q2TBE0 894 aaKnown RBP8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 REC114Q7Z4M0 266 aa8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 PDZD3Q86UT5 571 aa8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 JAZF1Q86VZ6 243 aa8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 SULF2Q8IWU5 870 aa8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 MRFAP1L1Q96HT8 127 aa8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 GMPR2Q9P2T1 348 aaKnown RBP8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 MSRB2Q9Y3D2 182 aa8.1□□□□□ -1.11
HMGB1P47-201ENST00000511281 GPR25O00155 361 aa8.09□□□□□ -1.11
HMGB1P47-201ENST00000511281 IMPDH2P12268 514 aa8.09□□□□□ -1.11
HMGB1P47-201ENST00000511281 CPB1P15086 417 aa8.09□□□□□ -1.11
HMGB1P47-201ENST00000511281 ZNF165P49910 485 aa8.09□□□□□ -1.11
HMGB1P47-201ENST00000511281 SEZ6Q53EL9 994 aa8.09□□□□□ -1.11
HMGB1P47-201ENST00000511281 LLGL2Q6P1M3 1020 aa8.09□□□□□ -1.11
HMGB1P47-201ENST00000511281 FBXO27Q8NI29 283 aa8.09□□□□□ -1.11
HMGB1P47-201ENST00000511281 ZNRF3Q9ULT6 936 aa8.09□□□□□ -1.11
HMGB1P47-201ENST00000511281 ATE1O95260 518 aa8.08□□□□□ -1.12
HMGB1P47-201ENST00000511281 SNRPBP14678 240 aaKnown RBP8.08□□□□□ -1.12
HMGB1P47-201ENST00000511281 PCBP4P57723 403 aaKnown RBP8.08□□□□□ -1.12
HMGB1P47-201ENST00000511281 AP3B2Q13367 1082 aa8.08□□□□□ -1.12
HMGB1P47-201ENST00000511281 RASA3Q14644 834 aa8.08□□□□□ -1.12
HMGB1P47-201ENST00000511281 DIEXFQ68CQ4 756 aaKnown RBP8.08□□□□□ -1.12
HMGB1P47-201ENST00000511281 VWA5B2Q8N398 1253 aa8.08□□□□□ -1.12
HMGB1P47-201ENST00000511281 STK35Q8TDR2 534 aa8.08□□□□□ -1.12
HMGB1P47-201ENST00000511281 CPLX3Q8WVH0 158 aa8.08□□□□□ -1.12
HMGB1P47-201ENST00000511281 SMG9Q9H0W8 520 aaKnown RBP8.08□□□□□ -1.12
HMGB1P47-201ENST00000511281 EHMT1Q9H9B1 1298 aa8.08□□□□□ -1.12
HMGB1P47-201ENST00000511281 MRVI1Q9Y6F6 885 aa8.08□□□□□ -1.12
HMGB1P47-201ENST00000511281 CDC14CA4D256 554 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 ENPP3O14638 875 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 TRIM37O94972 964 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 MX2P20592 715 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 LMNB1P20700 586 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 HSD3B2P26439 372 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 GAS6Q14393 721 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 ELMSAN1Q6PJG2 1045 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 FCHSD1Q86WN1 690 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 MICALL1Q8N3F8 863 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 DDX54Q8TDD1 881 aaKnown RBP8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 HNRNPLLQ8WVV9 542 aaKnown RBP8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 TRIM55Q9BYV6 548 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 IGFLR1Q9H665 355 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 PPT2Q9UMR5 302 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 TRIM33Q9UPN9 1127 aa8.07□□□□□ -1.12
HMGB1P47-201ENST00000511281 ELOA3CA0A087WX78 387 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 ANKRD62A6NC57 917 aa8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 ELOA3DA6NLF2 546 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 H3BRJ5 948 aa8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 MAP2K3P46734 347 aa8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 ZNF157P51786 506 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 CASP7P55210 303 aa8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 EIF6P56537 245 aaKnown RBP8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 RPL6Q02878 288 aaKnown RBP8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 SEPT6Q14141 434 aa8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 ELOA3BQ3SY89 546 aa8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 FAM169BQ8N8A8 192 aa8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 ELOA3Q8NG57 546 aa8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 WNT8BQ93098 351 aa8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 ANAPC16Q96DE5 110 aa8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 CCDC113Q9H0I3 377 aa8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 SNTG2Q9NY99 539 aa8.06□□□□□ -1.12
HMGB1P47-201ENST00000511281 PRR36Q9H6K5 1346 aa8.05□□□□□ -1.12
HMGB1P47-201ENST00000511281 U2SURPO15042 1029 aaKnown RBP8.05□□□□□ -1.12
HMGB1P47-201ENST00000511281 SMAD7O15105 426 aaKnown RBP8.05□□□□□ -1.12
HMGB1P47-201ENST00000511281 TLR3O15455 904 aaKnown RBP8.05□□□□□ -1.12
HMGB1P47-201ENST00000511281 CDC27P30260 824 aa8.05□□□□□ -1.12
HMGB1P47-201ENST00000511281 IKBKEQ14164 716 aa8.05□□□□□ -1.12
HMGB1P47-201ENST00000511281 GRIK5Q16478 980 aa8.05□□□□□ -1.12
HMGB1P47-201ENST00000511281 ZNF662Q6ZS27 426 aa8.05□□□□□ -1.12
HMGB1P47-201ENST00000511281 GRIN3AQ8TCU5 1115 aa8.05□□□□□ -1.12
HMGB1P47-201ENST00000511281 NRSN2Q9GZP1 204 aa8.05□□□□□ -1.12
HMGB1P47-201ENST00000511281 NSFL1CQ9UNZ2 370 aaKnown RBP8.05□□□□□ -1.12
HMGB1P47-201ENST00000511281 SOX1O00570 391 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 GSTP1P09211 210 aaKnown RBP8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 EPHA1P21709 976 aa8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 CABP4P57796 275 aa8.04□□□□□ -1.12
HMGB1P47-201ENST00000511281 TBC1D8BQ0IIM8 1120 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms