RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 NLRP12P59046 1061 aa11.65□□□□□ -0.54
TRAPPC11-206ENST00000509857 GSTM4Q03013 218 aa11.65□□□□□ -0.54
TRAPPC11-206ENST00000509857 Q6ZS46 218 aa11.65□□□□□ -0.54
TRAPPC11-206ENST00000509857 AKAP2Q9Y2D5 859 aa11.65□□□□□ -0.54
TRAPPC11-206ENST00000509857 KIAA1211Q6ZU35 1233 aa11.64□□□□□ -0.55
TRAPPC11-206ENST00000509857 TXNRD3Q86VQ6 643 aa11.64□□□□□ -0.55
TRAPPC11-206ENST00000509857 UBASH3BQ8TF42 649 aa11.64□□□□□ -0.55
TRAPPC11-206ENST00000509857 FAM161BQ96MY7 647 aa11.64□□□□□ -0.55
TRAPPC11-206ENST00000509857 TMEM39AQ9NV64 488 aa11.64□□□□□ -0.55
TRAPPC11-206ENST00000509857 ITGAEP38570 1179 aa11.63□□□□□ -0.55
TRAPPC11-206ENST00000509857 DUOXA2Q1HG44 320 aa11.63□□□□□ -0.55
TRAPPC11-206ENST00000509857 CEP44Q9C0F1 390 aa11.63□□□□□ -0.55
TRAPPC11-206ENST00000509857 LOC100289279A0A1B0GTE1 492 aa11.62□□□□□ -0.55
TRAPPC11-206ENST00000509857 SORBS3O60504 671 aa11.62□□□□□ -0.55
TRAPPC11-206ENST00000509857 CYP11A1P05108 521 aa11.62□□□□□ -0.55
TRAPPC11-206ENST00000509857 NOS3P29474 1203 aa11.62□□□□□ -0.55
TRAPPC11-206ENST00000509857 AP3B2Q13367 1082 aa11.62□□□□□ -0.55
TRAPPC11-206ENST00000509857 ACAD11Q709F0 780 aa11.62□□□□□ -0.55
TRAPPC11-206ENST00000509857 WFDC12Q8WWY7 111 aa11.62□□□□□ -0.55
TRAPPC11-206ENST00000509857 NECAB3Q96P71 396 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC11-206ENST00000509857 AKTIPQ9H8T0 292 aa11.62□□□□□ -0.55
TRAPPC11-206ENST00000509857 GPN3Q9UHW5 284 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC11-206ENST00000509857 IGHA1P01876 353 aa11.61□□□□□ -0.55
TRAPPC11-206ENST00000509857 PROCP04070 461 aa11.61□□□□□ -0.55
TRAPPC11-206ENST00000509857 PPP2R3AQ06190 1150 aa11.61□□□□□ -0.55
TRAPPC11-206ENST00000509857 CTSHP09668 335 aa11.6□□□□□ -0.55
TRAPPC11-206ENST00000509857 MRPL58Q14197 206 aaKnown RBP11.6□□□□□ -0.55
TRAPPC11-206ENST00000509857 CRELD1Q96HD1 420 aa11.6□□□□□ -0.55
TRAPPC11-206ENST00000509857 SPOCK3Q9BQ16 436 aa11.6□□□□□ -0.55
TRAPPC11-206ENST00000509857 USP26Q9BXU7 913 aa11.6□□□□□ -0.55
TRAPPC11-206ENST00000509857 MRS2Q9HD23 443 aa11.6□□□□□ -0.55
TRAPPC11-206ENST00000509857 PODXL2Q9NZ53 605 aa11.6□□□□□ -0.55
TRAPPC11-206ENST00000509857 MEGF11A6BM72 1044 aa11.59□□□□□ -0.55
TRAPPC11-206ENST00000509857 ENC1O14682 589 aa11.59□□□□□ -0.55
TRAPPC11-206ENST00000509857 GATA4P43694 442 aa11.59□□□□□ -0.55
TRAPPC11-206ENST00000509857 ZNF157P51786 506 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC11-206ENST00000509857 TPTE2Q6XPS3 522 aa11.59□□□□□ -0.55
TRAPPC11-206ENST00000509857 DLGAP3O95886 979 aa11.58□□□□□ -0.56
TRAPPC11-206ENST00000509857 MAOBP27338 520 aa11.58□□□□□ -0.56
TRAPPC11-206ENST00000509857 IREB2P48200 963 aaKnown RBP11.58□□□□□ -0.56
TRAPPC11-206ENST00000509857 POU4F3Q15319 338 aa11.58□□□□□ -0.56
TRAPPC11-206ENST00000509857 AGGF1Q8N302 714 aaeCLIP11.58□□□□□ -0.56
TRAPPC11-206ENST00000509857 SSBP4Q9BWG4 385 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC11-206ENST00000509857 RNF208Q9H0X6 261 aa11.58□□□□□ -0.56
TRAPPC11-206ENST00000509857 MSTNO14793 375 aa11.57□□□□□ -0.56
TRAPPC11-206ENST00000509857 FBXO24O75426 580 aa11.57□□□□□ -0.56
TRAPPC11-206ENST00000509857 ALX3O95076 343 aa11.57□□□□□ -0.56
TRAPPC11-206ENST00000509857 ST13P50502 369 aaKnown RBP11.57□□□□□ -0.56
TRAPPC11-206ENST00000509857 GPAT2Q6NUI2 795 aa11.57□□□□□ -0.56
TRAPPC11-206ENST00000509857 SV2BQ7L1I2 683 aa11.57□□□□□ -0.56
TRAPPC11-206ENST00000509857 RUSC1Q9BVN2 902 aa11.57□□□□□ -0.56
TRAPPC11-206ENST00000509857 TMPRSS13Q9BYE2 586 aa11.57□□□□□ -0.56
TRAPPC11-206ENST00000509857 VTI1BQ9UEU0 232 aa11.57□□□□□ -0.56
TRAPPC11-206ENST00000509857 TTF2Q9UNY4 1162 aaKnown RBP11.57□□□□□ -0.56
TRAPPC11-206ENST00000509857 CTSBP07858 339 aa11.56□□□□□ -0.56
TRAPPC11-206ENST00000509857 HP1BP3Q5SSJ5 553 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC11-206ENST00000509857 PDZD3Q86UT5 571 aa11.56□□□□□ -0.56
TRAPPC11-206ENST00000509857 DZIP1LQ8IYY4 767 aaKnown RBP11.56□□□□□ -0.56
TRAPPC11-206ENST00000509857 CORO1BQ9BR76 489 aa11.56□□□□□ -0.56
TRAPPC11-206ENST00000509857 BCL11AQ9H165 835 aa11.56□□□□□ -0.56
TRAPPC11-206ENST00000509857 ECEL1O95672 775 aa11.55□□□□□ -0.56
TRAPPC11-206ENST00000509857 NME2P22392 152 aa11.55□□□□□ -0.56
TRAPPC11-206ENST00000509857 MEI1Q5TIA1 1274 aa11.55□□□□□ -0.56
TRAPPC11-206ENST00000509857 SULF2Q8IWU5 870 aa11.55□□□□□ -0.56
TRAPPC11-206ENST00000509857 SUGCTQ9HAC7 445 aa11.55□□□□□ -0.56
TRAPPC11-206ENST00000509857 MYO15BQ96JP2 1530 aa11.55□□□□□ -0.56
TRAPPC11-206ENST00000509857 USP31Q70CQ4 1352 aa11.54□□□□□ -0.56
TRAPPC11-206ENST00000509857 EXOSC6Q5RKV6 272 aaKnown RBP11.54□□□□□ -0.56
TRAPPC11-206ENST00000509857 STK35Q8TDR2 534 aa11.54□□□□□ -0.56
TRAPPC11-206ENST00000509857 MEGF10Q96KG7 1140 aa11.54□□□□□ -0.56
TRAPPC11-206ENST00000509857 PAGE1O75459 146 aa11.53□□□□□ -0.56
TRAPPC11-206ENST00000509857 CELA3AP09093 270 aa11.53□□□□□ -0.56
TRAPPC11-206ENST00000509857 GSTP1P09211 210 aaKnown RBP11.53□□□□□ -0.56
TRAPPC11-206ENST00000509857 ARNTP27540 789 aa11.53□□□□□ -0.56
TRAPPC11-206ENST00000509857 TAF1CQ15572 869 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC11-206ENST00000509857 ANKRD34AQ69YU3 496 aa11.53□□□□□ -0.56
TRAPPC11-206ENST00000509857 SMG8Q8ND04 991 aaKnown RBP11.53□□□□□ -0.56
TRAPPC11-206ENST00000509857 CEP41Q9BYV8 373 aa11.53□□□□□ -0.56
TRAPPC11-206ENST00000509857 ZNF252P-AS1Q0IIN9 211 aa11.52□□□□□ -0.57
TRAPPC11-206ENST00000509857 NOC4LQ9BVI4 516 aaKnown RBP11.52□□□□□ -0.57
TRAPPC11-206ENST00000509857 KRT82Q9NSB4 513 aa11.52□□□□□ -0.57
TRAPPC11-206ENST00000509857 SAMM50Q9Y512 469 aa11.52□□□□□ -0.57
TRAPPC11-206ENST00000509857 SYNGAP1Q96PV0 1343 aa11.52□□□□□ -0.57
TRAPPC11-206ENST00000509857 GLB1P16278 677 aa11.51□□□□□ -0.57
TRAPPC11-206ENST00000509857 BMP6P22004 513 aa11.51□□□□□ -0.57
TRAPPC11-206ENST00000509857 VAMP1P23763 118 aa11.51□□□□□ -0.57
TRAPPC11-206ENST00000509857 UBL7Q96S82 380 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC11-206ENST00000509857 EMILIN2Q9BXX0 1053 aa11.51□□□□□ -0.57
TRAPPC11-206ENST00000509857 CACNA2D2Q9NY47 1150 aa11.51□□□□□ -0.57
TRAPPC11-206ENST00000509857 TIAF1O95411 115 aa11.5□□□□□ -0.57
TRAPPC11-206ENST00000509857 CCDC85BQ15834 202 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC11-206ENST00000509857 UVSSAQ2YD98 709 aa11.5□□□□□ -0.57
TRAPPC11-206ENST00000509857 NUTM2GQ5VZR2 741 aa11.5□□□□□ -0.57
TRAPPC11-206ENST00000509857 FAM46AQ96IP4 442 aaKnown RBP11.5□□□□□ -0.57
TRAPPC11-206ENST00000509857 CCDC86Q9H6F5 360 aaKnown RBP11.5□□□□□ -0.57
TRAPPC11-206ENST00000509857 CYP4F12Q9HCS2 524 aa11.5□□□□□ -0.57
TRAPPC11-206ENST00000509857 TPSG1Q9NRR2 321 aa11.5□□□□□ -0.57
TRAPPC11-206ENST00000509857 SCARA3Q6AZY7 606 aa11.49□□□□□ -0.57
TRAPPC11-206ENST00000509857 LDLRAD1Q5T700 205 aa11.48□□□□□ -0.57
TRAPPC11-206ENST00000509857 PCNX4Q63HM2 1172 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms