RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 VGLL4Q14135 290 aa13.11□□□□□ -0.31
MBD4-208ENST00000509828 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.11□□□□□ -0.31
MBD4-208ENST00000509828 SH3TC2Q8TF17 1288 aa13.11□□□□□ -0.31
MBD4-208ENST00000509828 HOOK2Q96ED9 719 aa13.11□□□□□ -0.31
MBD4-208ENST00000509828 MS4A4AQ96JQ5 239 aa13.11□□□□□ -0.31
MBD4-208ENST00000509828 TMEM39BQ9GZU3 492 aa13.11□□□□□ -0.31
MBD4-208ENST00000509828 CRKP46108 304 aa13.1□□□□□ -0.31
MBD4-208ENST00000509828 UBE4AQ14139 1066 aa13.1□□□□□ -0.31
MBD4-208ENST00000509828 FAM43AQ8N2R8 423 aa13.1□□□□□ -0.31
MBD4-208ENST00000509828 BIN2Q9UBW5 565 aaPredicted RBP13.1□□□□□ -0.31
MBD4-208ENST00000509828 FAM205AQ6ZU69 1335 aa13.1□□□□□ -0.31
MBD4-208ENST00000509828 MYH3P11055 1940 aa13.09□□□□□ -0.31
MBD4-208ENST00000509828 F6X3S4 739 aa13.09□□□□□ -0.31
MBD4-208ENST00000509828 HOXD10P28358 340 aa13.09□□□□□ -0.31
MBD4-208ENST00000509828 SNAPC2Q13487 334 aa13.09□□□□□ -0.31
MBD4-208ENST00000509828 CAVIN4Q5BKX8 364 aa13.09□□□□□ -0.31
MBD4-208ENST00000509828 WWC1Q8IX03 1113 aa13.09□□□□□ -0.31
MBD4-208ENST00000509828 TDRD7Q8NHU6 1098 aaKnown RBP13.09□□□□□ -0.31
MBD4-208ENST00000509828 WRNIP1Q96S55 665 aa13.09□□□□□ -0.31
MBD4-208ENST00000509828 IQSEC3Q9UPP2 1182 aaPredicted RBP13.09□□□□□ -0.31
MBD4-208ENST00000509828 IRS2Q9Y4H2 1338 aa13.09□□□□□ -0.31
MBD4-208ENST00000509828 TLR2O60603 784 aa13.08□□□□□ -0.32
MBD4-208ENST00000509828 FMNL1O95466 1100 aaPredicted RBP13.08□□□□□ -0.32
MBD4-208ENST00000509828 GNRH1P01148 92 aa13.08□□□□□ -0.32
MBD4-208ENST00000509828 PRMT2P55345 433 aa13.08□□□□□ -0.32
MBD4-208ENST00000509828 LACTBP83111 547 aaPredicted RBP13.08□□□□□ -0.32
MBD4-208ENST00000509828 SLC4A10Q6U841 1118 aa13.08□□□□□ -0.32
MBD4-208ENST00000509828 ERO1BQ86YB8 467 aa13.08□□□□□ -0.32
MBD4-208ENST00000509828 CDAN1Q8IWY9 1227 aa13.08□□□□□ -0.32
MBD4-208ENST00000509828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.08□□□□□ -0.32
MBD4-208ENST00000509828 RAET1EQ8TD07 263 aa13.08□□□□□ -0.32
MBD4-208ENST00000509828 TEKT1Q969V4 418 aa13.08□□□□□ -0.32
MBD4-208ENST00000509828 TEPSINQ96N21 525 aa13.08□□□□□ -0.32
MBD4-208ENST00000509828 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
MBD4-208ENST00000509828 SPDYE5A6NIY4 337 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 GRM8O00222 908 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 CACNB3P54284 484 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 CAP1Q01518 475 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 CCDC27Q2M243 656 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 EPHA10Q5JZY3 1008 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 BEND3Q5T5X7 828 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 DCAF15Q66K64 600 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 NKX2-3Q8TAU0 364 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 TBC1D22AQ8WUA7 517 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 ZKSCAN4Q969J2 545 aaPredicted RBP13.07□□□□□ -0.32
MBD4-208ENST00000509828 FAM84BQ96KN1 310 aaPredicted RBP13.07□□□□□ -0.32
MBD4-208ENST00000509828 ARHGAP39Q9C0H5 1083 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 IL16Q14005 1332 aa13.07□□□□□ -0.32
MBD4-208ENST00000509828 BTBD19C9JJ37 291 aa13.06□□□□□ -0.32
MBD4-208ENST00000509828 PSMC4P43686 418 aa13.06□□□□□ -0.32
MBD4-208ENST00000509828 HTATIP2Q9BUP3 242 aa13.06□□□□□ -0.32
MBD4-208ENST00000509828 ZCCHC17Q9NP64 241 aaKnown RBP13.06□□□□□ -0.32
MBD4-208ENST00000509828 CPA4Q9UI42 421 aa13.06□□□□□ -0.32
MBD4-208ENST00000509828 KIAA0100Q14667 2235 aaKnown RBP13.05□□□□□ -0.32
MBD4-208ENST00000509828 IRF6O14896 467 aa13.05□□□□□ -0.32
MBD4-208ENST00000509828 VAMP4O75379 141 aa13.05□□□□□ -0.32
MBD4-208ENST00000509828 ZEB1P37275 1124 aaPredicted RBP13.05□□□□□ -0.32
MBD4-208ENST00000509828 HDLBPQ00341 1268 aaKnown RBP13.05□□□□□ -0.32
MBD4-208ENST00000509828 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
MBD4-208ENST00000509828 PPIL2Q13356 520 aa13.05□□□□□ -0.32
MBD4-208ENST00000509828 METTL24Q5JXM2 366 aa13.05□□□□□ -0.32
MBD4-208ENST00000509828 TRIM47Q96LD4 638 aa13.05□□□□□ -0.32
MBD4-208ENST00000509828 ZNF341Q9BYN7 854 aa13.05□□□□□ -0.32
MBD4-208ENST00000509828 PUS3Q9BZE2 481 aaKnown RBP13.05□□□□□ -0.32
MBD4-208ENST00000509828 SRCIN1Q9C0H9 1055 aa13.05□□□□□ -0.32
MBD4-208ENST00000509828 NR2E3Q9Y5X4 410 aa13.05□□□□□ -0.32
MBD4-208ENST00000509828 SNCAIPQ9Y6H5 919 aa13.05□□□□□ -0.32
MBD4-208ENST00000509828 MROH5Q6ZUA9 1318 aa13.05□□□□□ -0.32
MBD4-208ENST00000509828 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
MBD4-208ENST00000509828 ALDH1L1O75891 902 aa13.04□□□□□ -0.32
MBD4-208ENST00000509828 UBXN2AP68543 259 aa13.04□□□□□ -0.32
MBD4-208ENST00000509828 MIGA2Q7L4E1 593 aa13.04□□□□□ -0.32
MBD4-208ENST00000509828 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.04□□□□□ -0.32
MBD4-208ENST00000509828 MAST3O60307 1309 aa13.04□□□□□ -0.32
MBD4-208ENST00000509828 FANCIQ9NVI1 1328 aa13.04□□□□□ -0.32
MBD4-208ENST00000509828 PDHXO00330 501 aa13.03□□□□□ -0.32
MBD4-208ENST00000509828 GRK4P32298 578 aa13.03□□□□□ -0.32
MBD4-208ENST00000509828 PPATQ06203 517 aa13.03□□□□□ -0.32
MBD4-208ENST00000509828 MTFR1Q15390 333 aa13.03□□□□□ -0.32
MBD4-208ENST00000509828 RNF208Q9H0X6 261 aa13.03□□□□□ -0.32
MBD4-208ENST00000509828 SRRDQ9UH36 339 aa13.03□□□□□ -0.32
MBD4-208ENST00000509828 GRIK5Q16478 980 aa13.02□□□□□ -0.33
MBD4-208ENST00000509828 FBXO33Q7Z6M2 555 aa13.02□□□□□ -0.33
MBD4-208ENST00000509828 ANKRD23Q86SG2 305 aa13.02□□□□□ -0.33
MBD4-208ENST00000509828 FAM83AQ86UY5 434 aa13.02□□□□□ -0.33
MBD4-208ENST00000509828 ZDHHC15Q96MV8 337 aa13.02□□□□□ -0.33
MBD4-208ENST00000509828 RIPOR2Q9Y4F9 1068 aa13.02□□□□□ -0.33
MBD4-208ENST00000509828 MYPNQ86TC9 1320 aa13.02□□□□□ -0.33
MBD4-208ENST00000509828 IFIT1P09914 478 aaKnown RBP13.01□□□□□ -0.33
MBD4-208ENST00000509828 CCL5P13501 91 aa13.01□□□□□ -0.33
MBD4-208ENST00000509828 OSBPP22059 807 aa13.01□□□□□ -0.33
MBD4-208ENST00000509828 BCAMP50895 628 aa13.01□□□□□ -0.33
MBD4-208ENST00000509828 FCGRTP55899 365 aa13.01□□□□□ -0.33
MBD4-208ENST00000509828 FKBP1CQ5VVH2 108 aa13.01□□□□□ -0.33
MBD4-208ENST00000509828 C17orf99Q6UX52 265 aa13.01□□□□□ -0.33
MBD4-208ENST00000509828 WDR63Q8IWG1 891 aa13.01□□□□□ -0.33
MBD4-208ENST00000509828 SUCLG2Q96I99 432 aa13.01□□□□□ -0.33
MBD4-208ENST00000509828 RBM27Q9P2N5 1060 aaKnown RBP13.01□□□□□ -0.33
MBD4-208ENST00000509828 ECM29Q5VYK3 1845 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms