RNA–Protein interactions for RNA: ENST00000509346.5

GYPA-206, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 383 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-206ENST00000509346 TRIM56Q9BRZ2 755 aaKnown RBP4.88□□□□□ -1.63
GYPA-206ENST00000509346 USP26Q9BXU7 913 aa4.88□□□□□ -1.63
GYPA-206ENST00000509346 PIM2Q9P1W9 311 aa4.88□□□□□ -1.63
GYPA-206ENST00000509346 AMOTL2Q9Y2J4 779 aa4.88□□□□□ -1.63
GYPA-206ENST00000509346 A0A1W2PP55 124 aa4.87□□□□□ -1.63
GYPA-206ENST00000509346 PAX4O43316 350 aa4.87□□□□□ -1.63
GYPA-206ENST00000509346 WNT11O96014 354 aa4.87□□□□□ -1.63
GYPA-206ENST00000509346 POLR3DP05423 398 aaPredicted RBP4.87□□□□□ -1.63
GYPA-206ENST00000509346 FOSL1P15407 271 aa4.87□□□□□ -1.63
GYPA-206ENST00000509346 ARL4DP49703 201 aa4.87□□□□□ -1.63
GYPA-206ENST00000509346 CPSF6Q16630 551 aaKnown RBP eCLIP4.87□□□□□ -1.63
GYPA-206ENST00000509346 EXOSC6Q5RKV6 272 aaKnown RBP4.87□□□□□ -1.63
GYPA-206ENST00000509346 CBLL1Q75N03 491 aa4.87□□□□□ -1.63
GYPA-206ENST00000509346 GALNT12Q8IXK2 581 aa4.87□□□□□ -1.63
GYPA-206ENST00000509346 C12orf50Q8NA57 414 aaPredicted RBP4.87□□□□□ -1.63
GYPA-206ENST00000509346 ASAP3Q8TDY4 903 aa4.87□□□□□ -1.63
GYPA-206ENST00000509346 GSX1Q9H4S2 264 aaPredicted RBP4.87□□□□□ -1.63
GYPA-206ENST00000509346 CYP4F12Q9HCS2 524 aa4.87□□□□□ -1.63
GYPA-206ENST00000509346 ARID1BQ8NFD5 2236 aaPredicted RBP4.87□□□□□ -1.63
GYPA-206ENST00000509346 GAS2O43903 313 aaKnown RBP4.86□□□□□ -1.63
GYPA-206ENST00000509346 ECEL1O95672 775 aa4.86□□□□□ -1.63
GYPA-206ENST00000509346 ADH5P11766 374 aa4.86□□□□□ -1.63
GYPA-206ENST00000509346 SOX4Q06945 474 aaPredicted RBP4.86□□□□□ -1.63
GYPA-206ENST00000509346 ZNF211Q13398 564 aaPredicted RBP4.86□□□□□ -1.63
GYPA-206ENST00000509346 SPRED3Q2MJR0 410 aa4.86□□□□□ -1.63
GYPA-206ENST00000509346 SEZ6L2Q6UXD5 910 aa4.86□□□□□ -1.63
GYPA-206ENST00000509346 WFDC3Q8IUB2 231 aa4.86□□□□□ -1.63
GYPA-206ENST00000509346 ABI1Q8IZP0 508 aa4.86□□□□□ -1.63
GYPA-206ENST00000509346 FBLIM1Q8WUP2 373 aa4.86□□□□□ -1.63
GYPA-206ENST00000509346 ANO2Q9NQ90 1003 aa4.86□□□□□ -1.63
GYPA-206ENST00000509346 CCDC39Q9UFE4 941 aa4.86□□□□□ -1.63
GYPA-206ENST00000509346 PRKAG2Q9UGJ0 569 aa4.86□□□□□ -1.63
GYPA-206ENST00000509346 GNEQ9Y223 722 aaKnown RBP4.86□□□□□ -1.63
GYPA-206ENST00000509346 A0A096LPE4 126 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 FAM95CA0A1B0GW59 222 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 A0A1W2PPZ6 126 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 B3GALT4O96024 378 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 ARHGAP4P98171 946 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 GSTM4Q03013 218 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 PCDH1Q08174 1060 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 USPL1Q5W0Q7 1092 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 B4GALNT3Q6L9W6 998 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 ZAR1Q86SH2 424 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 CLEC4MQ9H2X3 399 aaPredicted RBP4.85□□□□□ -1.63
GYPA-206ENST00000509346 ACSS3Q9H6R3 686 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 EGFL7Q9UHF1 273 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 ACTL7BQ9Y614 415 aa4.85□□□□□ -1.63
GYPA-206ENST00000509346 ICMTO60725 284 aa4.84□□□□□ -1.63
GYPA-206ENST00000509346 ITPKAP23677 461 aa4.84□□□□□ -1.63
GYPA-206ENST00000509346 MAOBP27338 520 aa4.84□□□□□ -1.63
GYPA-206ENST00000509346 TMCO4Q5TGY1 634 aa4.84□□□□□ -1.63
GYPA-206ENST00000509346 KIAA0319Q5VV43 1072 aa4.84□□□□□ -1.63
GYPA-206ENST00000509346 FBXL6Q8N531 539 aa4.84□□□□□ -1.63
GYPA-206ENST00000509346 TTC16Q8NEE8 873 aa4.84□□□□□ -1.63
GYPA-206ENST00000509346 SEMA6CQ9H3T2 930 aa4.84□□□□□ -1.63
GYPA-206ENST00000509346 FAM170BA6NMN3 283 aa4.83□□□□□ -1.64
GYPA-206ENST00000509346 BTBD11A6QL63 1104 aa4.83□□□□□ -1.64
GYPA-206ENST00000509346 TXKP42681 527 aa4.83□□□□□ -1.64
GYPA-206ENST00000509346 FAM129BQ96TA1 746 aa4.83□□□□□ -1.64
GYPA-206ENST00000509346 GZF1Q9H116 711 aaPredicted RBP4.83□□□□□ -1.64
GYPA-206ENST00000509346 ZNF576Q9H609 170 aa4.83□□□□□ -1.64
GYPA-206ENST00000509346 C1GALT1Q9NS00 363 aa4.83□□□□□ -1.64
GYPA-206ENST00000509346 FAM105AQ9NUU6 356 aa4.83□□□□□ -1.64
GYPA-206ENST00000509346 LEMD3Q9Y2U8 911 aa4.83□□□□□ -1.64
GYPA-206ENST00000509346 SYNGAP1Q96PV0 1343 aa4.82□□□□□ -1.64
GYPA-206ENST00000509346 DYNC1LI2O43237 492 aaPredicted RBP4.82□□□□□ -1.64
GYPA-206ENST00000509346 ITGB5P18084 799 aa4.82□□□□□ -1.64
GYPA-206ENST00000509346 MFAP1P55081 439 aaKnown RBP4.82□□□□□ -1.64
GYPA-206ENST00000509346 NFKBIBQ15653 356 aa4.82□□□□□ -1.64
GYPA-206ENST00000509346 PAOXQ6QHF9 649 aa4.82□□□□□ -1.64
GYPA-206ENST00000509346 NPM2Q86SE8 214 aaKnown RBP4.82□□□□□ -1.64
GYPA-206ENST00000509346 RGS22Q8NE09 1264 aa4.82□□□□□ -1.64
GYPA-206ENST00000509346 METTL22Q9BUU2 404 aaPredicted RBP4.82□□□□□ -1.64
GYPA-206ENST00000509346 LIN7BQ9HAP6 207 aa4.82□□□□□ -1.64
GYPA-206ENST00000509346 ABCB6Q9NP58 842 aa4.82□□□□□ -1.64
GYPA-206ENST00000509346 RNF114Q9Y508 228 aa4.82□□□□□ -1.64
GYPA-206ENST00000509346 IVNS1ABPQ9Y6Y0 642 aa4.82□□□□□ -1.64
GYPA-206ENST00000509346 EIF4EBP3O60516 100 aaPredicted RBP4.81□□□□□ -1.64
GYPA-206ENST00000509346 ABL1P00519 1130 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 CYP11A1P05108 521 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 NFICP08651 508 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 RXRBP28702 533 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 SERPINB4P48594 390 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 ORC1Q13415 861 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 AAMPQ13685 434 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 POU4F3Q15319 338 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 SND1Q7KZF4 910 aaKnown RBP eCLIP4.81□□□□□ -1.641e-7■■■■□ 25
GYPA-206ENST00000509346 TXNDC2Q86VQ3 553 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 VSIG10LQ86VR7 867 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 GLIS3Q8NEA6 775 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 TBC1D32Q96NH3 1257 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 OSBPL1AQ9BXW6 950 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 PAK6Q9NQU5 681 aaPredicted RBP4.81□□□□□ -1.64
GYPA-206ENST00000509346 ATG3Q9NT62 314 aa4.81□□□□□ -1.64
GYPA-206ENST00000509346 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.8□□□□□ -1.64
GYPA-206ENST00000509346 GPR182O15218 404 aa4.8□□□□□ -1.64
GYPA-206ENST00000509346 RANGAP1P46060 587 aaPredicted RBP4.8□□□□□ -1.64
GYPA-206ENST00000509346 USP11P51784 963 aa4.8□□□□□ -1.64
GYPA-206ENST00000509346 PTPN12Q05209 780 aaKnown RBP4.8□□□□□ -1.64
GYPA-206ENST00000509346 PRPF40BQ6NWY9 871 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms