RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 TDRD3Q9H7E2 651 aaKnown RBP19.94■□□□□ 0.78
PDLIM5-212ENST00000509333 GPR108Q9NPR9 543 aa19.94■□□□□ 0.78
PDLIM5-212ENST00000509333 WBP1LQ9NX94 342 aa19.94■□□□□ 0.78
PDLIM5-212ENST00000509333 ZNF70Q9UC06 446 aaPredicted RBP19.94■□□□□ 0.78
PDLIM5-212ENST00000509333 HSPA1AP0DMV8 641 aaKnown RBP19.93■□□□□ 0.78
PDLIM5-212ENST00000509333 HSPA1BP0DMV9 641 aaKnown RBP19.93■□□□□ 0.78
PDLIM5-212ENST00000509333 MAP2K2P36507 400 aa19.93■□□□□ 0.78
PDLIM5-212ENST00000509333 FKBP1BP68106 108 aa19.93■□□□□ 0.78
PDLIM5-212ENST00000509333 SPDYE2Q495Y8 402 aa19.93■□□□□ 0.78
PDLIM5-212ENST00000509333 APOBEC3HQ6NTF7 200 aaKnown RBP19.93■□□□□ 0.78
PDLIM5-212ENST00000509333 RGMBQ6NW40 437 aa19.93■□□□□ 0.78
PDLIM5-212ENST00000509333 HHIPL2Q6UWX4 724 aa19.93■□□□□ 0.78
PDLIM5-212ENST00000509333 PAXIP1Q6ZW49 1069 aaPredicted RBP19.93■□□□□ 0.78
PDLIM5-212ENST00000509333 MOB2Q70IA6 237 aa19.93■□□□□ 0.78
PDLIM5-212ENST00000509333 RPAP2Q8IXW5 612 aaPredicted RBP19.93■□□□□ 0.78
PDLIM5-212ENST00000509333 UBE2Q2LH0YL09 131 aa19.92■□□□□ 0.78
PDLIM5-212ENST00000509333 AOC2O75106 756 aa19.92■□□□□ 0.78
PDLIM5-212ENST00000509333 SIRT2Q8IXJ6 389 aa19.92■□□□□ 0.78
PDLIM5-212ENST00000509333 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.92■□□□□ 0.78
PDLIM5-212ENST00000509333 TEKT1Q969V4 418 aa19.92■□□□□ 0.78
PDLIM5-212ENST00000509333 ZDHHC15Q96MV8 337 aa19.92■□□□□ 0.78
PDLIM5-212ENST00000509333 SALL1Q9NSC2 1324 aa19.92■□□□□ 0.78
PDLIM5-212ENST00000509333 FAM155AB1AL88 458 aaPredicted RBP19.91■□□□□ 0.78
PDLIM5-212ENST00000509333 GRM1Q13255 1194 aa19.91■□□□□ 0.78
PDLIM5-212ENST00000509333 RASGRF1Q13972 1273 aa19.91■□□□□ 0.78
PDLIM5-212ENST00000509333 RASA3Q14644 834 aa19.91■□□□□ 0.78
PDLIM5-212ENST00000509333 ZIC5Q96T25 663 aa19.91■□□□□ 0.78
PDLIM5-212ENST00000509333 CHMP4BQ9H444 224 aaKnown RBP19.91■□□□□ 0.78
PDLIM5-212ENST00000509333 VEZTQ9HBM0 779 aa19.91■□□□□ 0.78
PDLIM5-212ENST00000509333 OS9Q13438 667 aaPredicted RBP19.9■□□□□ 0.78
PDLIM5-212ENST00000509333 TNNI3KQ59H18 835 aa19.9■□□□□ 0.78
PDLIM5-212ENST00000509333 CCDC102AQ96A19 550 aa19.9■□□□□ 0.78
PDLIM5-212ENST00000509333 YTHDC1Q96MU7 727 aaKnown RBP19.9■□□□□ 0.78
PDLIM5-212ENST00000509333 FPGT-TNNI3KV9GXZ4 949 aa19.9■□□□□ 0.78
PDLIM5-212ENST00000509333 COL1A1P02452 1464 aaPredicted RBP19.89■□□□□ 0.77
PDLIM5-212ENST00000509333 PRDX5P30044 214 aa19.89■□□□□ 0.77
PDLIM5-212ENST00000509333 ZNF157P51786 506 aaPredicted RBP19.89■□□□□ 0.77
PDLIM5-212ENST00000509333 MAP2K1Q02750 393 aaPredicted RBP19.89■□□□□ 0.77
PDLIM5-212ENST00000509333 GORABQ5T7V8 394 aa19.89■□□□□ 0.77
PDLIM5-212ENST00000509333 NBPF12Q5TAG4 269 aaPredicted RBP19.89■□□□□ 0.77
PDLIM5-212ENST00000509333 HMG20BQ9P0W2 317 aa19.89■□□□□ 0.77
PDLIM5-212ENST00000509333 PPP2R3BQ9Y5P8 575 aa19.89■□□□□ 0.77
PDLIM5-212ENST00000509333 PDS5AQ29RF7 1337 aaKnown RBP19.88■□□□□ 0.77
PDLIM5-212ENST00000509333 LDHBP07195 334 aaKnown RBP19.88■□□□□ 0.77
PDLIM5-212ENST00000509333 NF2P35240 595 aa19.88■□□□□ 0.77
PDLIM5-212ENST00000509333 SUPT20HL1Q3ZLR7 823 aa19.88■□□□□ 0.77
PDLIM5-212ENST00000509333 LDLRAD1Q5T700 205 aa19.88■□□□□ 0.77
PDLIM5-212ENST00000509333 EAF2Q96CJ1 260 aaPredicted RBP19.88■□□□□ 0.77
PDLIM5-212ENST00000509333 MAST3O60307 1309 aa19.87■□□□□ 0.77
PDLIM5-212ENST00000509333 ARID4AP29374 1257 aaPredicted RBP19.87■□□□□ 0.77
PDLIM5-212ENST00000509333 DIXDC1Q155Q3 683 aa19.87■□□□□ 0.77
PDLIM5-212ENST00000509333 ZGPATQ8N5A5 531 aaKnown RBP19.87■□□□□ 0.77
PDLIM5-212ENST00000509333 TEPSINQ96N21 525 aa19.87■□□□□ 0.77
PDLIM5-212ENST00000509333 DBNDD2Q9BQY9 259 aa19.87■□□□□ 0.77
PDLIM5-212ENST00000509333 EXOC6BQ9Y2D4 811 aa19.87■□□□□ 0.77
PDLIM5-212ENST00000509333 TCP10L2B9ZVM9 353 aa19.86■□□□□ 0.77
PDLIM5-212ENST00000509333 FOXN1O15353 648 aa19.86■□□□□ 0.77
PDLIM5-212ENST00000509333 USP2O75604 605 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-212ENST00000509333 UQCRFS1P1P0C7P4 283 aa19.86■□□□□ 0.77
PDLIM5-212ENST00000509333 NOGQ13253 232 aa19.86■□□□□ 0.77
PDLIM5-212ENST00000509333 PRKG1Q13976 671 aa19.86■□□□□ 0.77
PDLIM5-212ENST00000509333 TTLL12Q14166 644 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-212ENST00000509333 FKBP1CQ5VVH2 108 aa19.86■□□□□ 0.77
PDLIM5-212ENST00000509333 SPATA5Q8NB90 893 aa19.86■□□□□ 0.77
PDLIM5-212ENST00000509333 FAM163AQ96GL9 167 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-212ENST00000509333 CCDC8Q9H0W5 538 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-212ENST00000509333 DAGLAQ9Y4D2 1042 aa19.86■□□□□ 0.77
PDLIM5-212ENST00000509333 KIF23Q02241 960 aaPredicted RBP19.85■□□□□ 0.77
PDLIM5-212ENST00000509333 TNFAIP1Q13829 316 aa19.85■□□□□ 0.77
PDLIM5-212ENST00000509333 MAP3K11Q16584 847 aa19.85■□□□□ 0.77
PDLIM5-212ENST00000509333 SPTY2D1Q68D10 685 aaPredicted RBP19.85■□□□□ 0.77
PDLIM5-212ENST00000509333 TBC1D9Q6ZT07 1266 aa19.85■□□□□ 0.77
PDLIM5-212ENST00000509333 ARMC9Q7Z3E5 817 aa19.85■□□□□ 0.77
PDLIM5-212ENST00000509333 ZNF512BQ96KM6 892 aaPredicted RBP19.85■□□□□ 0.77
PDLIM5-212ENST00000509333 ABCF2Q9UG63 623 aa19.85■□□□□ 0.77
PDLIM5-212ENST00000509333 FZD1Q9UP38 647 aa19.85■□□□□ 0.77
PDLIM5-212ENST00000509333 SLC10A3P09131 477 aa19.84■□□□□ 0.77
PDLIM5-212ENST00000509333 MCAMP43121 646 aa19.84■□□□□ 0.77
PDLIM5-212ENST00000509333 CACNB3P54284 484 aa19.84■□□□□ 0.77
PDLIM5-212ENST00000509333 HSP90AB4PQ58FF6 505 aa19.84■□□□□ 0.77
PDLIM5-212ENST00000509333 CCDC158Q5M9N0 1113 aa19.84■□□□□ 0.77
PDLIM5-212ENST00000509333 CDC42EP5Q6NZY7 148 aa19.84■□□□□ 0.77
PDLIM5-212ENST00000509333 PI16Q6UXB8 463 aa19.84■□□□□ 0.77
PDLIM5-212ENST00000509333 ERC1Q8IUD2 1116 aa19.84■□□□□ 0.77
PDLIM5-212ENST00000509333 ANGEL1Q9UNK9 670 aaKnown RBP19.84■□□□□ 0.77
PDLIM5-212ENST00000509333 PPP1R12BO60237 982 aaPredicted RBP19.83■□□□□ 0.77
PDLIM5-212ENST00000509333 HMMRO75330 724 aa19.83■□□□□ 0.77
PDLIM5-212ENST00000509333 TNNI2P48788 182 aa19.83■□□□□ 0.77
PDLIM5-212ENST00000509333 ERICH6Q7L0X2 663 aa19.83■□□□□ 0.77
PDLIM5-212ENST00000509333 FAM83AQ86UY5 434 aa19.83■□□□□ 0.77
PDLIM5-212ENST00000509333 CDAN1Q8IWY9 1227 aa19.83■□□□□ 0.77
PDLIM5-212ENST00000509333 RHPN1Q8TCX5 695 aa19.83■□□□□ 0.77
PDLIM5-212ENST00000509333 ZNF384Q8TF68 577 aa19.83■□□□□ 0.77
PDLIM5-212ENST00000509333 CSRNP1Q96S65 589 aa19.83■□□□□ 0.77
PDLIM5-212ENST00000509333 TMEM39BQ9GZU3 492 aa19.83■□□□□ 0.77
PDLIM5-212ENST00000509333 USP40Q9NVE5 1235 aa19.83■□□□□ 0.77
PDLIM5-212ENST00000509333 DBNLQ9UJU6 430 aaKnown RBP19.83■□□□□ 0.77
PDLIM5-212ENST00000509333 COL13A1Q5TAT6 717 aaPredicted RBP19.82■□□□□ 0.76
PDLIM5-212ENST00000509333 RASAL3Q86YV0 1011 aa19.82■□□□□ 0.76
PDLIM5-212ENST00000509333 AIDAQ96BJ3 306 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms