RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 TEKT1Q969V4 418 aa23.12■■□□□ 1.29
UBE3D-207ENST00000509102 ECM29Q5VYK3 1845 aa23.11■■□□□ 1.29
UBE3D-207ENST00000509102 SLC10A3P09131 477 aa23.11■■□□□ 1.29
UBE3D-207ENST00000509102 REM2Q8IYK8 340 aaPredicted RBP23.11■■□□□ 1.29
UBE3D-207ENST00000509102 PCDHAC2Q9Y5I4 1007 aa23.11■■□□□ 1.29
UBE3D-207ENST00000509102 FAM155AB1AL88 458 aaPredicted RBP23.1■■□□□ 1.29
UBE3D-207ENST00000509102 PPP1R12BO60237 982 aaPredicted RBP23.1■■□□□ 1.29
UBE3D-207ENST00000509102 HSPA8P11142 646 aaKnown RBP23.1■■□□□ 1.29
UBE3D-207ENST00000509102 MS4A1P11836 297 aa23.1■■□□□ 1.29
UBE3D-207ENST00000509102 TNNI2P48788 182 aa23.1■■□□□ 1.29
UBE3D-207ENST00000509102 UBE2Q2LH0YL09 131 aa23.09■■□□□ 1.29
UBE3D-207ENST00000509102 SEMA3EO15041 775 aa23.09■■□□□ 1.29
UBE3D-207ENST00000509102 G3BP1Q13283 466 aaKnown RBP eCLIP23.09■■□□□ 1.29
UBE3D-207ENST00000509102 TMOD2Q9NZR1 351 aa23.09■■□□□ 1.29
UBE3D-207ENST00000509102 KIF23Q02241 960 aaPredicted RBP23.08■■□□□ 1.29
UBE3D-207ENST00000509102 PRKG1Q13976 671 aa23.08■■□□□ 1.29
UBE3D-207ENST00000509102 SPDYE2Q495Y8 402 aa23.08■■□□□ 1.29
UBE3D-207ENST00000509102 MOB2Q70IA6 237 aa23.08■■□□□ 1.29
UBE3D-207ENST00000509102 RASAL3Q86YV0 1011 aa23.08■■□□□ 1.29
UBE3D-207ENST00000509102 MRIQ9BWK5 157 aa23.08■■□□□ 1.29
UBE3D-207ENST00000509102 TDRD3Q9H7E2 651 aaKnown RBP23.08■■□□□ 1.29
UBE3D-207ENST00000509102 ZNF70Q9UC06 446 aaPredicted RBP23.08■■□□□ 1.29
UBE3D-207ENST00000509102 DENND2AQ9ULE3 1009 aa23.08■■□□□ 1.29
UBE3D-207ENST00000509102 RASA3Q14644 834 aa23.07■■□□□ 1.28
UBE3D-207ENST00000509102 ANGEL1Q9UNK9 670 aaKnown RBP23.07■■□□□ 1.28
UBE3D-207ENST00000509102 MYH13Q9UKX3 1938 aa23.06■■□□□ 1.28
UBE3D-207ENST00000509102 TFCP2Q12800 502 aa23.06■■□□□ 1.28
UBE3D-207ENST00000509102 MVPQ14764 893 aaKnown RBP23.06■■□□□ 1.28
UBE3D-207ENST00000509102 ZGPATQ8N5A5 531 aaKnown RBP23.06■■□□□ 1.28
UBE3D-207ENST00000509102 A0A1B0GUL7 405 aa23.05■■□□□ 1.28
UBE3D-207ENST00000509102 OS9Q13438 667 aaPredicted RBP23.05■■□□□ 1.28
UBE3D-207ENST00000509102 GORABQ5T7V8 394 aa23.05■■□□□ 1.28
UBE3D-207ENST00000509102 ZDHHC15Q96MV8 337 aa23.05■■□□□ 1.28
UBE3D-207ENST00000509102 ZIC5Q96T25 663 aa23.05■■□□□ 1.28
UBE3D-207ENST00000509102 PNMA6EA0A0J9YXQ4 647 aa23.04■■□□□ 1.28
UBE3D-207ENST00000509102 LDHBP07195 334 aaKnown RBP23.04■■□□□ 1.28
UBE3D-207ENST00000509102 PHKA1P46020 1223 aa23.04■■□□□ 1.28
UBE3D-207ENST00000509102 IREB2P48200 963 aaKnown RBP23.04■■□□□ 1.28
UBE3D-207ENST00000509102 TIMM10P62072 90 aa23.04■■□□□ 1.28
UBE3D-207ENST00000509102 GRIK5Q16478 980 aa23.04■■□□□ 1.28
UBE3D-207ENST00000509102 CCDC102BQ68D86 513 aa23.04■■□□□ 1.28
UBE3D-207ENST00000509102 HHIPL2Q6UWX4 724 aa23.04■■□□□ 1.28
UBE3D-207ENST00000509102 NEUROD6Q96NK8 337 aa23.04■■□□□ 1.28
UBE3D-207ENST00000509102 SAGE1Q9NXZ1 904 aa23.04■■□□□ 1.28
UBE3D-207ENST00000509102 UNCXA6NJT0 531 aa23.03■■□□□ 1.28
UBE3D-207ENST00000509102 TCP10L2B9ZVM9 353 aa23.03■■□□□ 1.28
UBE3D-207ENST00000509102 TSKSQ9UJT2 592 aa23.03■■□□□ 1.28
UBE3D-207ENST00000509102 ZBTB22O15209 634 aa23.02■■□□□ 1.28
UBE3D-207ENST00000509102 RLBP1P12271 317 aa23.02■■□□□ 1.28
UBE3D-207ENST00000509102 ADORA1P30542 326 aa23.02■■□□□ 1.28
UBE3D-207ENST00000509102 NBPF12Q5TAG4 269 aaPredicted RBP23.02■■□□□ 1.28
UBE3D-207ENST00000509102 XAGE2Q96GT9 111 aa23.02■■□□□ 1.28
UBE3D-207ENST00000509102 AOX1Q06278 1338 aa23.02■■□□□ 1.28
UBE3D-207ENST00000509102 SALL1Q9NSC2 1324 aa23.02■■□□□ 1.28
UBE3D-207ENST00000509102 ZBTB7BO15156 539 aaPredicted RBP23.01■■□□□ 1.27
UBE3D-207ENST00000509102 ATP8B2P98198 1209 aa23.01■■□□□ 1.27
UBE3D-207ENST00000509102 MAP3K11Q16584 847 aa23.01■■□□□ 1.27
UBE3D-207ENST00000509102 LDLRAD1Q5T700 205 aa23.01■■□□□ 1.27
UBE3D-207ENST00000509102 HOOK2Q96ED9 719 aa23.01■■□□□ 1.27
UBE3D-207ENST00000509102 SLC10A4Q96EP9 437 aa23.01■■□□□ 1.27
UBE3D-207ENST00000509102 CSRNP1Q96S65 589 aa23.01■■□□□ 1.27
UBE3D-207ENST00000509102 SREBF2Q12772 1141 aa23■■□□□ 1.27
UBE3D-207ENST00000509102 POLA2Q14181 598 aa23■■□□□ 1.27
UBE3D-207ENST00000509102 SPTY2D1Q68D10 685 aaPredicted RBP23■■□□□ 1.27
UBE3D-207ENST00000509102 SLF2Q8IX21 1173 aa23■■□□□ 1.27
UBE3D-207ENST00000509102 SSH3Q8TE77 659 aa23■■□□□ 1.27
UBE3D-207ENST00000509102 C1orf115Q9H7X2 142 aa23■■□□□ 1.27
UBE3D-207ENST00000509102 PDS5AQ29RF7 1337 aaKnown RBP23■■□□□ 1.27
UBE3D-207ENST00000509102 SURF6O75683 361 aaKnown RBP22.99■■□□□ 1.27
UBE3D-207ENST00000509102 PRDX5P30044 214 aa22.99■■□□□ 1.27
UBE3D-207ENST00000509102 FKBP1CQ5VVH2 108 aa22.99■■□□□ 1.27
UBE3D-207ENST00000509102 CHMP4BQ9H444 224 aaKnown RBP22.99■■□□□ 1.27
UBE3D-207ENST00000509102 RCAN3Q9UKA8 241 aa22.99■■□□□ 1.27
UBE3D-207ENST00000509102 TRPA1O75762 1119 aa22.98■■□□□ 1.27
UBE3D-207ENST00000509102 RASGRF1Q13972 1273 aa22.98■■□□□ 1.27
UBE3D-207ENST00000509102 APOBEC3HQ6NTF7 200 aaKnown RBP22.98■■□□□ 1.27
UBE3D-207ENST00000509102 FAM83AQ86UY5 434 aa22.98■■□□□ 1.27
UBE3D-207ENST00000509102 DZIP1Q86YF9 867 aaKnown RBP22.98■■□□□ 1.27
UBE3D-207ENST00000509102 ANKRD13AQ8IZ07 590 aa22.98■■□□□ 1.27
UBE3D-207ENST00000509102 PANK1Q8TE04 598 aa22.98■■□□□ 1.27
UBE3D-207ENST00000509102 TMEM39BQ9GZU3 492 aa22.98■■□□□ 1.27
UBE3D-207ENST00000509102 RNF186Q9NXI6 227 aa22.98■■□□□ 1.27
UBE3D-207ENST00000509102 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.98■■□□□ 1.27
UBE3D-207ENST00000509102 ABCF2Q9UG63 623 aa22.98■■□□□ 1.27
UBE3D-207ENST00000509102 SSC5DA1L4H1 1573 aa22.97■■□□□ 1.27
UBE3D-207ENST00000509102 MKRN3Q13064 507 aaKnown RBP22.97■■□□□ 1.27
UBE3D-207ENST00000509102 PPP4R3CPQ6ZMV5 832 aa22.97■■□□□ 1.27
UBE3D-207ENST00000509102 FZD1Q9UP38 647 aa22.97■■□□□ 1.27
UBE3D-207ENST00000509102 AKAP11Q9UKA4 1901 aa22.96■■□□□ 1.27
UBE3D-207ENST00000509102 CACNB3P54284 484 aa22.96■■□□□ 1.27
UBE3D-207ENST00000509102 DIXDC1Q155Q3 683 aa22.96■■□□□ 1.27
UBE3D-207ENST00000509102 SPRYD7Q5W111 196 aa22.96■■□□□ 1.27
UBE3D-207ENST00000509102 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.96■■□□□ 1.27
UBE3D-207ENST00000509102 GPR108Q9NPR9 543 aa22.96■■□□□ 1.27
UBE3D-207ENST00000509102 DAGLAQ9Y4D2 1042 aa22.96■■□□□ 1.27
UBE3D-207ENST00000509102 USP2O75604 605 aaPredicted RBP22.95■■□□□ 1.26
UBE3D-207ENST00000509102 UQCRFS1P1P0C7P4 283 aa22.95■■□□□ 1.26
UBE3D-207ENST00000509102 ZBTB48P10074 688 aaPredicted RBP22.95■■□□□ 1.26
UBE3D-207ENST00000509102 TEPSINQ96N21 525 aa22.95■■□□□ 1.26
UBE3D-207ENST00000509102 DDX19BQ9UMR2 479 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms