RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 VEGFBP49765 207 aa22.44■■□□□ 1.18
CLDND1-220ENST00000508902 RPAP2Q8IXW5 612 aaPredicted RBP22.44■■□□□ 1.18
CLDND1-220ENST00000508902 ZNF384Q8TF68 577 aa22.44■■□□□ 1.18
CLDND1-220ENST00000508902 PAPPA2Q9BXP8 1791 aa22.44■■□□□ 1.18
CLDND1-220ENST00000508902 SALL1Q9NSC2 1324 aa22.44■■□□□ 1.18
CLDND1-220ENST00000508902 DBNLQ9UJU6 430 aaKnown RBP22.44■■□□□ 1.18
CLDND1-220ENST00000508902 PDS5AQ29RF7 1337 aaKnown RBP22.43■■□□□ 1.18
CLDND1-220ENST00000508902 SEMA3EO15041 775 aa22.43■■□□□ 1.18
CLDND1-220ENST00000508902 MCAMP43121 646 aa22.43■■□□□ 1.18
CLDND1-220ENST00000508902 OS9Q13438 667 aaPredicted RBP22.43■■□□□ 1.18
CLDND1-220ENST00000508902 IFFO2Q5TF58 517 aa22.43■■□□□ 1.18
CLDND1-220ENST00000508902 WDR66Q8TBY9 1149 aa22.43■■□□□ 1.18
CLDND1-220ENST00000508902 HMG20BQ9P0W2 317 aa22.43■■□□□ 1.18
CLDND1-220ENST00000508902 ABT1Q9ULW3 272 aaKnown RBP22.43■■□□□ 1.18
CLDND1-220ENST00000508902 DIXDC1Q155Q3 683 aa22.42■■□□□ 1.18
CLDND1-220ENST00000508902 SPDYE2Q495Y8 402 aa22.42■■□□□ 1.18
CLDND1-220ENST00000508902 MOB2Q70IA6 237 aa22.42■■□□□ 1.18
CLDND1-220ENST00000508902 CDAN1Q8IWY9 1227 aa22.42■■□□□ 1.18
CLDND1-220ENST00000508902 TDRD3Q9H7E2 651 aaKnown RBP22.42■■□□□ 1.18
CLDND1-220ENST00000508902 DENND2AQ9ULE3 1009 aa22.42■■□□□ 1.18
CLDND1-220ENST00000508902 APOBEC3HQ6NTF7 200 aaKnown RBP22.41■■□□□ 1.18
CLDND1-220ENST00000508902 CRBNQ96SW2 442 aa22.41■■□□□ 1.18
CLDND1-220ENST00000508902 CCDC8Q9H0W5 538 aaPredicted RBP22.41■■□□□ 1.18
CLDND1-220ENST00000508902 GNL3LQ9NVN8 582 aaKnown RBP22.41■■□□□ 1.18
CLDND1-220ENST00000508902 ZNF70Q9UC06 446 aaPredicted RBP22.41■■□□□ 1.18
CLDND1-220ENST00000508902 SUGT1Q9Y2Z0 365 aa22.41■■□□□ 1.18
CLDND1-220ENST00000508902 OTOFQ9HC10 1997 aa22.4■■□□□ 1.18
CLDND1-220ENST00000508902 RBM5P52756 815 aaKnown RBP eCLIP22.4■■□□□ 1.18
CLDND1-220ENST00000508902 HDLBPQ00341 1268 aaKnown RBP22.4■■□□□ 1.18
CLDND1-220ENST00000508902 DEFB115Q30KQ5 88 aa22.4■■□□□ 1.18
CLDND1-220ENST00000508902 CYP4F22Q6NT55 531 aa22.4■■□□□ 1.18
CLDND1-220ENST00000508902 ZDHHC15Q96MV8 337 aa22.4■■□□□ 1.18
CLDND1-220ENST00000508902 GBA2Q9HCG7 927 aaPredicted RBP22.4■■□□□ 1.18
CLDND1-220ENST00000508902 IL1RAPL2Q9NP60 686 aa22.4■■□□□ 1.18
CLDND1-220ENST00000508902 FZD1Q9UP38 647 aa22.4■■□□□ 1.18
CLDND1-220ENST00000508902 PCDHB15Q9Y5E8 787 aa22.4■■□□□ 1.18
CLDND1-220ENST00000508902 MAST2Q6P0Q8 1798 aa22.4■■□□□ 1.18
CLDND1-220ENST00000508902 CACNB3P54284 484 aa22.39■■□□□ 1.17
CLDND1-220ENST00000508902 APOBEC3FQ8IUX4 373 aaKnown RBP22.39■■□□□ 1.17
CLDND1-220ENST00000508902 RHPN1Q8TCX5 695 aa22.39■■□□□ 1.17
CLDND1-220ENST00000508902 DAGLAQ9Y4D2 1042 aa22.39■■□□□ 1.17
CLDND1-220ENST00000508902 TBC1D9Q6ZT07 1266 aa22.38■■□□□ 1.17
CLDND1-220ENST00000508902 TEKT1Q969V4 418 aa22.38■■□□□ 1.17
CLDND1-220ENST00000508902 MRIQ9BWK5 157 aa22.38■■□□□ 1.17
CLDND1-220ENST00000508902 DEFB129Q9H1M3 183 aa22.38■■□□□ 1.17
CLDND1-220ENST00000508902 VEZTQ9HBM0 779 aa22.38■■□□□ 1.17
CLDND1-220ENST00000508902 DOCK2Q92608 1830 aa22.38■■□□□ 1.17
CLDND1-220ENST00000508902 APBB1O00213 710 aa22.37■■□□□ 1.17
CLDND1-220ENST00000508902 SPATA5Q8NB90 893 aa22.37■■□□□ 1.17
CLDND1-220ENST00000508902 WDR33Q9C0J8 1336 aaKnown RBP22.36■■□□□ 1.17
CLDND1-220ENST00000508902 LDHBP07195 334 aaKnown RBP22.36■■□□□ 1.17
CLDND1-220ENST00000508902 HUNKP57058 714 aa22.36■■□□□ 1.17
CLDND1-220ENST00000508902 HHIPL2Q6UWX4 724 aa22.36■■□□□ 1.17
CLDND1-220ENST00000508902 CAPNS2Q96L46 248 aa22.36■■□□□ 1.17
CLDND1-220ENST00000508902 TEPSINQ96N21 525 aa22.36■■□□□ 1.17
CLDND1-220ENST00000508902 ZIC5Q96T25 663 aa22.36■■□□□ 1.17
CLDND1-220ENST00000508902 SNRKQ9NRH2 765 aa22.36■■□□□ 1.17
CLDND1-220ENST00000508902 RFX7Q2KHR2 1363 aa22.36■■□□□ 1.17
CLDND1-220ENST00000508902 GAKO14976 1311 aa22.35■■□□□ 1.17
CLDND1-220ENST00000508902 AOC2O75106 756 aa22.35■■□□□ 1.17
CLDND1-220ENST00000508902 RASA3Q14644 834 aa22.35■■□□□ 1.17
CLDND1-220ENST00000508902 AACSQ86V21 672 aa22.35■■□□□ 1.17
CLDND1-220ENST00000508902 HHIPL1Q96JK4 782 aa22.35■■□□□ 1.17
CLDND1-220ENST00000508902 CHMP4BQ9H444 224 aaKnown RBP22.35■■□□□ 1.17
CLDND1-220ENST00000508902 NDUFB9Q9Y6M9 179 aa22.35■■□□□ 1.17
CLDND1-220ENST00000508902 MAST3O60307 1309 aa22.34■■□□□ 1.17
CLDND1-220ENST00000508902 FAM155AB1AL88 458 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-220ENST00000508902 HMMRO75330 724 aa22.34■■□□□ 1.17
CLDND1-220ENST00000508902 GORABQ5T7V8 394 aa22.34■■□□□ 1.17
CLDND1-220ENST00000508902 NBPF12Q5TAG4 269 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-220ENST00000508902 ERC1Q8IUD2 1116 aa22.34■■□□□ 1.17
CLDND1-220ENST00000508902 ZNF512BQ96KM6 892 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-220ENST00000508902 ABCF2Q9UG63 623 aa22.34■■□□□ 1.17
CLDND1-220ENST00000508902 CDK5RAP2Q96SN8 1893 aa22.33■■□□□ 1.17
CLDND1-220ENST00000508902 TCP10L2B9ZVM9 353 aa22.33■■□□□ 1.17
CLDND1-220ENST00000508902 CYP2E1P05181 493 aaPredicted RBP22.33■■□□□ 1.17
CLDND1-220ENST00000508902 UQCRFS1P1P0C7P4 283 aa22.33■■□□□ 1.17
CLDND1-220ENST00000508902 TTC39AQ5SRH9 613 aa22.33■■□□□ 1.17
CLDND1-220ENST00000508902 TMEM39BQ9GZU3 492 aa22.33■■□□□ 1.17
CLDND1-220ENST00000508902 UBE2Q2LH0YL09 131 aa22.32■■□□□ 1.16
CLDND1-220ENST00000508902 MYO1BO43795 1136 aa22.32■■□□□ 1.16
CLDND1-220ENST00000508902 SMARCA5O60264 1052 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-220ENST00000508902 ZAP70P43403 619 aa22.32■■□□□ 1.16
CLDND1-220ENST00000508902 MECOMQ03112 1051 aa22.32■■□□□ 1.16
CLDND1-220ENST00000508902 NFIAQ12857 509 aa22.32■■□□□ 1.16
CLDND1-220ENST00000508902 CDC42EP5Q6NZY7 148 aa22.32■■□□□ 1.16
CLDND1-220ENST00000508902 C2orf69Q8N8R5 385 aa22.32■■□□□ 1.16
CLDND1-220ENST00000508902 KIF1BPQ96EK5 621 aa22.32■■□□□ 1.16
CLDND1-220ENST00000508902 PIH1D3Q9NQM4 214 aaKnown RBP22.32■■□□□ 1.16
CLDND1-220ENST00000508902 GRM1Q13255 1194 aa22.31■■□□□ 1.16
CLDND1-220ENST00000508902 PRKG1Q13976 671 aa22.31■■□□□ 1.16
CLDND1-220ENST00000508902 HSP90AB4PQ58FF6 505 aa22.31■■□□□ 1.16
CLDND1-220ENST00000508902 NSUN4Q96CB9 384 aaKnown RBP22.31■■□□□ 1.16
CLDND1-220ENST00000508902 PPP2R3BQ9Y5P8 575 aa22.31■■□□□ 1.16
CLDND1-220ENST00000508902 RAB11FIP3O75154 756 aa22.3■■□□□ 1.16
CLDND1-220ENST00000508902 PAXIP1Q6ZW49 1069 aaPredicted RBP22.3■■□□□ 1.16
CLDND1-220ENST00000508902 DCTPP1Q9H773 170 aa22.3■■□□□ 1.16
CLDND1-220ENST00000508902 HSPA1AP0DMV8 641 aaKnown RBP22.29■■□□□ 1.16
CLDND1-220ENST00000508902 HSPA1BP0DMV9 641 aaKnown RBP22.29■■□□□ 1.16
CLDND1-220ENST00000508902 FKBP1BP68106 108 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms