RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 NRSN2Q9GZP1 204 aa12.35□□□□□ -0.43
CHD1-205ENST00000508756 FBXO24O75426 580 aa12.34□□□□□ -0.43
CHD1-205ENST00000508756 PROCP04070 461 aa12.34□□□□□ -0.43
CHD1-205ENST00000508756 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
CHD1-205ENST00000508756 TMC4Q7Z404 712 aa12.34□□□□□ -0.43
CHD1-205ENST00000508756 TXNRD3Q86VQ6 643 aa12.34□□□□□ -0.43
CHD1-205ENST00000508756 AKTIPQ9H8T0 292 aa12.34□□□□□ -0.43
CHD1-205ENST00000508756 ZFYVE1Q9HBF4 777 aa12.34□□□□□ -0.43
CHD1-205ENST00000508756 LOC100289279A0A1B0GTE1 492 aa12.33□□□□□ -0.44
CHD1-205ENST00000508756 GATA4P43694 442 aa12.33□□□□□ -0.44
CHD1-205ENST00000508756 TPTE2Q6XPS3 522 aa12.33□□□□□ -0.44
CHD1-205ENST00000508756 TMEM130Q8N3G9 435 aa12.33□□□□□ -0.44
CHD1-205ENST00000508756 MSTNO14793 375 aa12.31□□□□□ -0.44
CHD1-205ENST00000508756 ECEL1O95672 775 aa12.31□□□□□ -0.44
CHD1-205ENST00000508756 DLGAP3O95886 979 aa12.31□□□□□ -0.44
CHD1-205ENST00000508756 MAOBP27338 520 aa12.31□□□□□ -0.44
CHD1-205ENST00000508756 DDX54Q8TDD1 881 aaKnown RBP12.31□□□□□ -0.44
CHD1-205ENST00000508756 TMEM39AQ9NV64 488 aa12.31□□□□□ -0.44
CHD1-205ENST00000508756 CTSBP07858 339 aa12.3□□□□□ -0.44
CHD1-205ENST00000508756 ZNF16P17020 682 aaPredicted RBP12.3□□□□□ -0.44
CHD1-205ENST00000508756 ZNF326Q5BKZ1 582 aaKnown RBP12.3□□□□□ -0.44
CHD1-205ENST00000508756 PPM1HQ9ULR3 514 aa12.3□□□□□ -0.44
CHD1-205ENST00000508756 CCDC9Q9Y3X0 531 aaKnown RBP12.3□□□□□ -0.44
CHD1-205ENST00000508756 POU4F3Q15319 338 aa12.29□□□□□ -0.44
CHD1-205ENST00000508756 MEGF10Q96KG7 1140 aa12.29□□□□□ -0.44
CHD1-205ENST00000508756 RUSC1Q9BVN2 902 aa12.29□□□□□ -0.44
CHD1-205ENST00000508756 TTF2Q9UNY4 1162 aaKnown RBP12.29□□□□□ -0.44
CHD1-205ENST00000508756 SORBS3O60504 671 aa12.28□□□□□ -0.44
CHD1-205ENST00000508756 CYP11A1P05108 521 aa12.28□□□□□ -0.44
CHD1-205ENST00000508756 PPP2R3AQ06190 1150 aa12.28□□□□□ -0.44
CHD1-205ENST00000508756 RGS22Q8NE09 1264 aa12.28□□□□□ -0.44
CHD1-205ENST00000508756 NECAB3Q96P71 396 aaPredicted RBP12.28□□□□□ -0.44
CHD1-205ENST00000508756 MRS2Q9HD23 443 aa12.28□□□□□ -0.44
CHD1-205ENST00000508756 VTI1BQ9UEU0 232 aa12.28□□□□□ -0.44
CHD1-205ENST00000508756 ENC1O14682 589 aa12.27□□□□□ -0.45
CHD1-205ENST00000508756 EIF4EBP3O60516 100 aaPredicted RBP12.27□□□□□ -0.45
CHD1-205ENST00000508756 CTSHP09668 335 aa12.27□□□□□ -0.45
CHD1-205ENST00000508756 GLB1P16278 677 aa12.27□□□□□ -0.45
CHD1-205ENST00000508756 AP3B2Q13367 1082 aa12.27□□□□□ -0.45
CHD1-205ENST00000508756 MEI1Q5TIA1 1274 aa12.27□□□□□ -0.45
CHD1-205ENST00000508756 Q6ZS46 218 aa12.27□□□□□ -0.45
CHD1-205ENST00000508756 STK35Q8TDR2 534 aa12.27□□□□□ -0.45
CHD1-205ENST00000508756 CORO1BQ9BR76 489 aa12.27□□□□□ -0.45
CHD1-205ENST00000508756 PODXL2Q9NZ53 605 aa12.27□□□□□ -0.45
CHD1-205ENST00000508756 PAGE1O75459 146 aa12.26□□□□□ -0.45
CHD1-205ENST00000508756 IGHA1P01876 353 aa12.26□□□□□ -0.45
CHD1-205ENST00000508756 CEP44Q9C0F1 390 aa12.26□□□□□ -0.45
CHD1-205ENST00000508756 RNF208Q9H0X6 261 aa12.26□□□□□ -0.45
CHD1-205ENST00000508756 CELA3AP09093 270 aa12.25□□□□□ -0.45
CHD1-205ENST00000508756 DOC2BQ14184 412 aa12.25□□□□□ -0.45
CHD1-205ENST00000508756 SULF2Q8IWU5 870 aa12.25□□□□□ -0.45
CHD1-205ENST00000508756 ANKRD24Q8TF21 1146 aa12.25□□□□□ -0.45
CHD1-205ENST00000508756 SSBP4Q9BWG4 385 aaPredicted RBP12.25□□□□□ -0.45
CHD1-205ENST00000508756 ZC3H12CQ9C0D7 883 aaKnown RBP12.25□□□□□ -0.45
CHD1-205ENST00000508756 TPSG1Q9NRR2 321 aa12.25□□□□□ -0.45
CHD1-205ENST00000508756 TMPRSS13Q9BYE2 586 aa12.24□□□□□ -0.45
CHD1-205ENST00000508756 RBM47A0AV96 593 aaKnown RBP12.23□□□□□ -0.45
CHD1-205ENST00000508756 UBL7Q96S82 380 aaPredicted RBP12.23□□□□□ -0.45
CHD1-205ENST00000508756 MEGF11A6BM72 1044 aa12.22□□□□□ -0.45
CHD1-205ENST00000508756 NME2P22392 152 aa12.22□□□□□ -0.45
CHD1-205ENST00000508756 NUTM2GQ5VZR2 741 aa12.22□□□□□ -0.45
CHD1-205ENST00000508756 PDZD3Q86UT5 571 aa12.22□□□□□ -0.45
CHD1-205ENST00000508756 DZIP1LQ8IYY4 767 aaKnown RBP12.22□□□□□ -0.45
CHD1-205ENST00000508756 CRELD1Q96HD1 420 aa12.22□□□□□ -0.45
CHD1-205ENST00000508756 GSTP1P09211 210 aaKnown RBP12.21□□□□□ -0.45
CHD1-205ENST00000508756 PDE3AQ14432 1141 aa12.21□□□□□ -0.45
CHD1-205ENST00000508756 EXOSC6Q5RKV6 272 aaKnown RBP12.21□□□□□ -0.45
CHD1-205ENST00000508756 CEP41Q9BYV8 373 aa12.21□□□□□ -0.45
CHD1-205ENST00000508756 CCDC86Q9H6F5 360 aaKnown RBP12.21□□□□□ -0.45
CHD1-205ENST00000508756 ARNTP27540 789 aa12.2□□□□□ -0.46
CHD1-205ENST00000508756 MRPL58Q14197 206 aaKnown RBP12.2□□□□□ -0.46
CHD1-205ENST00000508756 CCDC85BQ15834 202 aaPredicted RBP12.2□□□□□ -0.46
CHD1-205ENST00000508756 ANKRD34AQ69YU3 496 aa12.2□□□□□ -0.46
CHD1-205ENST00000508756 FDX2Q6P4F2 183 aa12.2□□□□□ -0.46
CHD1-205ENST00000508756 TP53INP1Q96A56 240 aa12.2□□□□□ -0.46
CHD1-205ENST00000508756 PREPP48147 710 aa12.19□□□□□ -0.46
CHD1-205ENST00000508756 RASIP1Q5U651 963 aa12.19□□□□□ -0.46
CHD1-205ENST00000508756 SV2BQ7L1I2 683 aa12.19□□□□□ -0.46
CHD1-205ENST00000508756 SMG8Q8ND04 991 aaKnown RBP12.19□□□□□ -0.46
CHD1-205ENST00000508756 KCNB2Q92953 911 aa12.19□□□□□ -0.46
CHD1-205ENST00000508756 CBX8Q9HC52 389 aa12.19□□□□□ -0.46
CHD1-205ENST00000508756 DRD2P14416 443 aa12.18□□□□□ -0.46
CHD1-205ENST00000508756 BMP6P22004 513 aa12.18□□□□□ -0.46
CHD1-205ENST00000508756 TAF1CQ15572 869 aaPredicted RBP12.18□□□□□ -0.46
CHD1-205ENST00000508756 GRIN3AQ8TCU5 1115 aa12.18□□□□□ -0.46
CHD1-205ENST00000508756 SUGCTQ9HAC7 445 aa12.18□□□□□ -0.46
CHD1-205ENST00000508756 CYP4F12Q9HCS2 524 aa12.18□□□□□ -0.46
CHD1-205ENST00000508756 LIG1P18858 919 aa12.17□□□□□ -0.46
CHD1-205ENST00000508756 HP1BP3Q5SSJ5 553 aaPredicted RBP12.17□□□□□ -0.46
CHD1-205ENST00000508756 PCNX4Q63HM2 1172 aa12.17□□□□□ -0.46
CHD1-205ENST00000508756 C12orf50Q8NA57 414 aaPredicted RBP12.17□□□□□ -0.46
CHD1-205ENST00000508756 WDR89Q96FK6 387 aaPredicted RBP12.17□□□□□ -0.46
CHD1-205ENST00000508756 FAM46AQ96IP4 442 aaKnown RBP12.17□□□□□ -0.46
CHD1-205ENST00000508756 USP31Q70CQ4 1352 aa12.17□□□□□ -0.46
CHD1-205ENST00000508756 ZNF862O60290 1169 aa12.16□□□□□ -0.46
CHD1-205ENST00000508756 TIAF1O95411 115 aa12.16□□□□□ -0.46
CHD1-205ENST00000508756 ITGAEP38570 1179 aa12.16□□□□□ -0.46
CHD1-205ENST00000508756 ST13P50502 369 aaKnown RBP12.16□□□□□ -0.46
CHD1-205ENST00000508756 ZNF252P-AS1Q0IIN9 211 aa12.16□□□□□ -0.46
CHD1-205ENST00000508756 AKAP4Q5JQC9 854 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms