RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 TAF1DQ9H5J8 278 aaPredicted RBP15.65■□□□□ 0.1
TCOF1-210ENST00000506767 ANTXR1Q9H6X2 564 aa15.65■□□□□ 0.1
TCOF1-210ENST00000506767 PIH1D3Q9NQM4 214 aaKnown RBP15.65■□□□□ 0.1
TCOF1-210ENST00000506767 ADARB2Q9NS39 739 aaKnown RBP15.65■□□□□ 0.1
TCOF1-210ENST00000506767 ABCF2Q9UG63 623 aa15.65■□□□□ 0.1
TCOF1-210ENST00000506767 TTF2Q9UNY4 1162 aaKnown RBP15.65■□□□□ 0.1
TCOF1-210ENST00000506767 F8W031 263 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-210ENST00000506767 EPHX2P34913 555 aa15.64■□□□□ 0.09
TCOF1-210ENST00000506767 HDLBPQ00341 1268 aaKnown RBP15.64■□□□□ 0.09
TCOF1-210ENST00000506767 ERICH6Q7L0X2 663 aa15.64■□□□□ 0.09
TCOF1-210ENST00000506767 OGFOD1Q8N543 542 aa15.64■□□□□ 0.09
TCOF1-210ENST00000506767 MTMR14Q8NCE2 650 aa15.64■□□□□ 0.09
TCOF1-210ENST00000506767 MYOZ2Q9NPC6 264 aa15.64■□□□□ 0.09
TCOF1-210ENST00000506767 HDAC9Q9UKV0 1011 aa15.64■□□□□ 0.09
TCOF1-210ENST00000506767 MAST3O60307 1309 aa15.64■□□□□ 0.09
TCOF1-210ENST00000506767 EGFRP00533 1210 aa15.63■□□□□ 0.09
TCOF1-210ENST00000506767 HSPA6P17066 643 aa15.63■□□□□ 0.09
TCOF1-210ENST00000506767 HIRAP54198 1017 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-210ENST00000506767 TTF1Q15361 905 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-210ENST00000506767 USP50Q70EL3 339 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-210ENST00000506767 SAMD7Q7Z3H4 446 aa15.63■□□□□ 0.09
TCOF1-210ENST00000506767 ZNF384Q8TF68 577 aa15.63■□□□□ 0.09
TCOF1-210ENST00000506767 EDC3Q96F86 508 aaKnown RBP15.63■□□□□ 0.09
TCOF1-210ENST00000506767 ZBED3Q96IU2 234 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-210ENST00000506767 DNAJC2Q99543 621 aaKnown RBP15.63■□□□□ 0.09
TCOF1-210ENST00000506767 PAG1Q9NWQ8 432 aa15.63■□□□□ 0.09
TCOF1-210ENST00000506767 SERPINA10Q9UK55 444 aa15.63■□□□□ 0.09
TCOF1-210ENST00000506767 ADAMTSL1Q8N6G6 1762 aa15.62■□□□□ 0.09
TCOF1-210ENST00000506767 GOLIM4O00461 696 aa15.62■□□□□ 0.09
TCOF1-210ENST00000506767 MECOMQ03112 1051 aa15.62■□□□□ 0.09
TCOF1-210ENST00000506767 HHIPL2Q6UWX4 724 aa15.62■□□□□ 0.09
TCOF1-210ENST00000506767 PNMA8AQ86V59 439 aaPredicted RBP15.62■□□□□ 0.09
TCOF1-210ENST00000506767 TRPM4Q8TD43 1214 aa15.62■□□□□ 0.09
TCOF1-210ENST00000506767 NSUN4Q96CB9 384 aaKnown RBP15.62■□□□□ 0.09
TCOF1-210ENST00000506767 FAM163AQ96GL9 167 aaPredicted RBP15.62■□□□□ 0.09
TCOF1-210ENST00000506767 LRP2BPQ9P2M1 347 aa15.62■□□□□ 0.09
TCOF1-210ENST00000506767 MAST2Q6P0Q8 1798 aa15.62■□□□□ 0.09
TCOF1-210ENST00000506767 CRKP46108 304 aa15.61■□□□□ 0.09
TCOF1-210ENST00000506767 KIF4BQ2VIQ3 1234 aa15.61■□□□□ 0.09
TCOF1-210ENST00000506767 CFAP100Q494V2 611 aa15.61■□□□□ 0.09
TCOF1-210ENST00000506767 TBC1D10BQ4KMP7 808 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-210ENST00000506767 RAI14Q9P0K7 980 aa15.61■□□□□ 0.09
TCOF1-210ENST00000506767 PCDHAC2Q9Y5I4 1007 aa15.61■□□□□ 0.09
TCOF1-210ENST00000506767 MYH2Q9UKX2 1941 aa15.6■□□□□ 0.09
TCOF1-210ENST00000506767 WNT10BO00744 389 aa15.6■□□□□ 0.09
TCOF1-210ENST00000506767 DIXDC1Q155Q3 683 aa15.6■□□□□ 0.09
TCOF1-210ENST00000506767 RBM26Q5T8P6 1007 aaKnown RBP15.6■□□□□ 0.09
TCOF1-210ENST00000506767 TMED8Q6PL24 325 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-210ENST00000506767 DZIP1Q86YF9 867 aaKnown RBP15.6■□□□□ 0.09
TCOF1-210ENST00000506767 TEKT1Q969V4 418 aa15.6■□□□□ 0.09
TCOF1-210ENST00000506767 ZDHHC15Q96MV8 337 aa15.6■□□□□ 0.09
TCOF1-210ENST00000506767 PGAP2Q9UHJ9 254 aa15.6■□□□□ 0.09
TCOF1-210ENST00000506767 GAKO14976 1311 aa15.6■□□□□ 0.09
TCOF1-210ENST00000506767 SPDYE2BA6NHP3 402 aa15.59■□□□□ 0.09
TCOF1-210ENST00000506767 IDH1O75874 414 aaKnown RBP15.59■□□□□ 0.09
TCOF1-210ENST00000506767 SPDYE6P0CI01 402 aa15.59■□□□□ 0.09
TCOF1-210ENST00000506767 MAP3K12Q12852 859 aa15.59■□□□□ 0.09
TCOF1-210ENST00000506767 DLGAP5Q15398 846 aa15.59■□□□□ 0.09
TCOF1-210ENST00000506767 NBPF9Q3BBW0 867 aa15.59■□□□□ 0.09
TCOF1-210ENST00000506767 APOBEC3HQ6NTF7 200 aaKnown RBP15.59■□□□□ 0.09
TCOF1-210ENST00000506767 SLF2Q8IX21 1173 aa15.59■□□□□ 0.09
TCOF1-210ENST00000506767 KBTBD3Q8NAB2 608 aa15.59■□□□□ 0.09
TCOF1-210ENST00000506767 PRMT6Q96LA8 375 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-210ENST00000506767 DAGLAQ9Y4D2 1042 aa15.59■□□□□ 0.09
TCOF1-210ENST00000506767 ECM29Q5VYK3 1845 aa15.59■□□□□ 0.09
TCOF1-210ENST00000506767 TOMM70O94826 608 aa15.58■□□□□ 0.08
TCOF1-210ENST00000506767 MAP4K4O95819 1239 aaPredicted RBP15.58■□□□□ 0.08
TCOF1-210ENST00000506767 LDHCP07864 332 aa15.58■□□□□ 0.08
TCOF1-210ENST00000506767 POTEIP0CG38 1075 aa15.58■□□□□ 0.08
TCOF1-210ENST00000506767 POTEJP0CG39 1038 aa15.58■□□□□ 0.08
TCOF1-210ENST00000506767 GSTO1P78417 241 aa15.58■□□□□ 0.08
TCOF1-210ENST00000506767 NAA16Q6N069 864 aaPredicted RBP15.58■□□□□ 0.08
TCOF1-210ENST00000506767 SKAP1Q86WV1 359 aa15.58■□□□□ 0.08
TCOF1-210ENST00000506767 ZC3H15Q8WU90 426 aaKnown RBP15.58■□□□□ 0.08
TCOF1-210ENST00000506767 MROH7-TTC4A0A0A0MT08 1334 aa15.58■□□□□ 0.08
TCOF1-210ENST00000506767 MYH7P12883 1935 aa15.58■□□□□ 0.08
TCOF1-210ENST00000506767 GPR75-ASB3A0A0A6YYF3 556 aa15.57■□□□□ 0.08
TCOF1-210ENST00000506767 TCRBV5S4A2TA0A5A2 114 aa15.57■□□□□ 0.08
TCOF1-210ENST00000506767 RBM5P52756 815 aaKnown RBP eCLIP15.57■□□□□ 0.08
TCOF1-210ENST00000506767 EAPPQ56P03 285 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-210ENST00000506767 TTC22Q5TAA0 569 aa15.57■□□□□ 0.08
TCOF1-210ENST00000506767 SLC9C2Q5TAH2 1124 aa15.57■□□□□ 0.08
TCOF1-210ENST00000506767 ADGRA1Q86SQ6 560 aa15.57■□□□□ 0.08
TCOF1-210ENST00000506767 MAGEB6Q8N7X4 407 aa15.57■□□□□ 0.08
TCOF1-210ENST00000506767 EVI5LQ96CN4 794 aa15.57■□□□□ 0.08
TCOF1-210ENST00000506767 CEP350Q5VT06 3117 aa15.57■□□□□ 0.08
TCOF1-210ENST00000506767 GSPT1P15170 499 aaKnown RBP15.56■□□□□ 0.08
TCOF1-210ENST00000506767 PDE6AP16499 860 aa15.56■□□□□ 0.08
TCOF1-210ENST00000506767 ADD2P35612 726 aa15.56■□□□□ 0.08
TCOF1-210ENST00000506767 LDHDQ86WU2 507 aa15.56■□□□□ 0.08
TCOF1-210ENST00000506767 TICAM2Q86XR7 235 aa15.56■□□□□ 0.08
TCOF1-210ENST00000506767 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.56■□□□□ 0.08
TCOF1-210ENST00000506767 ASTN2O75129 1339 aaPredicted RBP15.56■□□□□ 0.08
TCOF1-210ENST00000506767 PITPNM2Q9BZ72 1349 aa15.55■□□□□ 0.08
TCOF1-210ENST00000506767 CYP7A1P22680 504 aa15.55■□□□□ 0.08
TCOF1-210ENST00000506767 PPP4CP60510 307 aa15.55■□□□□ 0.08
TCOF1-210ENST00000506767 UBE3CQ15386 1083 aa15.55■□□□□ 0.08
TCOF1-210ENST00000506767 SPDYE2Q495Y8 402 aa15.55■□□□□ 0.08
TCOF1-210ENST00000506767 ZSCAN25Q6NSZ9 544 aa15.55■□□□□ 0.08
TCOF1-210ENST00000506767 TDRD3Q9H7E2 651 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms